RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 PPP1R11O60927 126 aaPredicted RBP18.43■□□□□ 0.54
CCDC90B-203ENST00000525503 CRKP46108 304 aa18.43■□□□□ 0.54
CCDC90B-203ENST00000525503 PSMD2Q13200 908 aa18.43■□□□□ 0.54
CCDC90B-203ENST00000525503 MEA1Q16626 185 aa18.43■□□□□ 0.54
CCDC90B-203ENST00000525503 FKBP15Q5T1M5 1219 aa18.43■□□□□ 0.54
CCDC90B-203ENST00000525503 CENPPQ6IPU0 288 aa18.43■□□□□ 0.54
CCDC90B-203ENST00000525503 PODNQ7Z5L7 613 aa18.43■□□□□ 0.54
CCDC90B-203ENST00000525503 KIAA0895Q8NCT3 520 aa18.43■□□□□ 0.54
CCDC90B-203ENST00000525503 SNX29Q8TEQ0 813 aa18.43■□□□□ 0.54
CCDC90B-203ENST00000525503 CHP1Q99653 195 aa18.43■□□□□ 0.54
CCDC90B-203ENST00000525503 NOC4LQ9BVI4 516 aaKnown RBP18.43■□□□□ 0.54
CCDC90B-203ENST00000525503 DHX36Q9H2U1 1008 aaKnown RBP18.43■□□□□ 0.54
CCDC90B-203ENST00000525503 DDX25Q9UHL0 483 aaKnown RBP18.43■□□□□ 0.54
CCDC90B-203ENST00000525503 ANKRD31Q8N7Z5 1873 aa18.43■□□□□ 0.54
CCDC90B-203ENST00000525503 ZRANB2O95218 330 aaKnown RBP eCLIP18.42■□□□□ 0.54
CCDC90B-203ENST00000525503 TRIM21P19474 475 aaKnown RBP18.42■□□□□ 0.54
CCDC90B-203ENST00000525503 CHMP4BP1P59074 171 aa18.42■□□□□ 0.54
CCDC90B-203ENST00000525503 KRT83P78385 493 aa18.42■□□□□ 0.54
CCDC90B-203ENST00000525503 UBE2SQ16763 222 aa18.42■□□□□ 0.54
CCDC90B-203ENST00000525503 TMEM119Q4V9L6 283 aa18.42■□□□□ 0.54
CCDC90B-203ENST00000525503 TTBK2Q6IQ55 1244 aa18.42■□□□□ 0.54
CCDC90B-203ENST00000525503 ZSCAN29Q8IWY8 852 aaPredicted RBP18.42■□□□□ 0.54
CCDC90B-203ENST00000525503 ZDHHC15Q96MV8 337 aa18.42■□□□□ 0.54
CCDC90B-203ENST00000525503 MRIQ9BWK5 157 aa18.42■□□□□ 0.54
CCDC90B-203ENST00000525503 PSTPIP2Q9H939 334 aa18.42■□□□□ 0.54
CCDC90B-203ENST00000525503 SLC39A2Q9NP94 309 aa18.42■□□□□ 0.54
CCDC90B-203ENST00000525503 FHOD1Q9Y613 1164 aa18.42■□□□□ 0.54
CCDC90B-203ENST00000525503 A0A1W2PQJ5 194 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 MARCH6O60337 910 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 FKBP1AP62942 108 aaKnown RBP18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 ZBED6P86452 979 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 SEPT2Q15019 361 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 FIGNQ5HY92 759 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 GUF1Q8N442 669 aaKnown RBP18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 TTYH3Q9C0H2 523 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 SEMA6BQ9H3T3 888 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 HAUS4Q9H6D7 363 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 NRXN2Q9P2S2 1712 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 ABCB11O95342 1321 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 USP17L10C9JJH3 530 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 POTEB2H3BUK9 544 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 SLC26A4O43511 780 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 PNMA6AP0CW24 399 aaPredicted RBP18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 CYLC1P35663 651 aaPredicted RBP18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 WHAMMP3Q1A5X7 153 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 FOXR2Q6PJQ5 311 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 ZNF662Q6ZS27 426 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 KCTD1Q719H9 257 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 FLAD1Q8NFF5 587 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 DCAF4Q8WV16 495 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 PCMTD1Q96MG8 357 aaPredicted RBP18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 ERGIC2Q96RQ1 377 aa18.41■□□□□ 0.54
CCDC90B-203ENST00000525503 POTEMA6NI47 508 aa18.4■□□□□ 0.54
CCDC90B-203ENST00000525503 SLC16A2P36021 539 aa18.4■□□□□ 0.54
CCDC90B-203ENST00000525503 LRRC63Q05C16 580 aa18.4■□□□□ 0.54
CCDC90B-203ENST00000525503 MIIPQ5JXC2 388 aa18.4■□□□□ 0.54
CCDC90B-203ENST00000525503 WDR59Q6PJI9 974 aa18.4■□□□□ 0.54
CCDC90B-203ENST00000525503 COL23A1Q86Y22 540 aaPredicted RBP18.4■□□□□ 0.54
CCDC90B-203ENST00000525503 CCDC170Q8IYT3 715 aa18.4■□□□□ 0.54
CCDC90B-203ENST00000525503 MKL1Q969V6 931 aa18.4■□□□□ 0.54
CCDC90B-203ENST00000525503 MYH8P13535 1937 aa18.39■□□□□ 0.54
CCDC90B-203ENST00000525503 KDM3AQ9Y4C1 1321 aa18.39■□□□□ 0.54
CCDC90B-203ENST00000525503 HDLBPQ00341 1268 aaKnown RBP18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 NFIAQ12857 509 aa18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 EHBP1Q8NDI1 1231 aa18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 KANSL2Q9H9L4 492 aa18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 NYAP2Q9P242 653 aa18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 ATF5Q9Y2D1 282 aaPredicted RBP18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 REXO2Q9Y3B8 237 aaKnown RBP18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 IPO7O95373 1038 aaKnown RBP18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 CDK17Q00537 523 aa18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 MCTP2Q6DN12 878 aa18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 DYMQ7RTS9 669 aa18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 HPS3Q969F9 1004 aa18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 AKT1S1Q96B36 256 aa18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 TSG101Q99816 390 aa18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 PARD6BQ9BYG5 372 aa18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 NT5C3AQ9H0P0 336 aa18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 PI4KBQ9UBF8 816 aa18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 PCDHA12Q9UN75 941 aa18.39■□□□□ 0.53
CCDC90B-203ENST00000525503 GREB1LQ9C091 1923 aaPredicted RBP18.38■□□□□ 0.53
CCDC90B-203ENST00000525503 CERKLQ49MI3 558 aaPredicted RBP18.38■□□□□ 0.53
CCDC90B-203ENST00000525503 VWA3BQ502W6 1294 aa18.38■□□□□ 0.53
CCDC90B-203ENST00000525503 STRIP1Q5VSL9 837 aa18.38■□□□□ 0.53
CCDC90B-203ENST00000525503 DDX12PQ92771 950 aa18.38■□□□□ 0.53
CCDC90B-203ENST00000525503 HAS1Q92839 578 aa18.38■□□□□ 0.53
CCDC90B-203ENST00000525503 TRIM34Q9BYJ4 488 aa18.38■□□□□ 0.53
CCDC90B-203ENST00000525503 ARFGAP3Q9NP61 516 aa18.38■□□□□ 0.53
CCDC90B-203ENST00000525503 BMP2KQ9NSY1 1161 aaPredicted RBP18.38■□□□□ 0.53
CCDC90B-203ENST00000525503 RASSF10A6NK89 507 aa18.37■□□□□ 0.53
CCDC90B-203ENST00000525503 NPM3O75607 178 aaKnown RBP18.37■□□□□ 0.53
CCDC90B-203ENST00000525503 MMP10P09238 476 aa18.37■□□□□ 0.53
CCDC90B-203ENST00000525503 IDEP14735 1019 aa18.37■□□□□ 0.53
CCDC90B-203ENST00000525503 USP11P51784 963 aa18.37■□□□□ 0.53
CCDC90B-203ENST00000525503 BRD3Q15059 726 aa18.37■□□□□ 0.53
CCDC90B-203ENST00000525503 HYIQ5T013 277 aa18.37■□□□□ 0.53
CCDC90B-203ENST00000525503 CC2D1AQ6P1N0 951 aaPredicted RBP18.37■□□□□ 0.53
CCDC90B-203ENST00000525503 IDI2Q9BXS1 227 aa18.37■□□□□ 0.53
CCDC90B-203ENST00000525503 AGPAT5Q9NUQ2 364 aa18.37■□□□□ 0.53
CCDC90B-203ENST00000525503 PUF60Q9UHX1 559 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms