RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 GYG1P46976 350 aa20.21■□□□□ 0.83
PCDHB18P-201ENST00000524813 SH2D3CQ8N5H7 860 aa20.21■□□□□ 0.83
PCDHB18P-201ENST00000524813 ZIM3Q96PE6 472 aa20.21■□□□□ 0.83
PCDHB18P-201ENST00000524813 CEP89Q96ST8 783 aa20.21■□□□□ 0.83
PCDHB18P-201ENST00000524813 NCAPGQ9BPX3 1015 aa20.21■□□□□ 0.83
PCDHB18P-201ENST00000524813 EPHB6O15197 1021 aa20.21■□□□□ 0.83
PCDHB18P-201ENST00000524813 FCER1AP12319 257 aa20.21■□□□□ 0.83
PCDHB18P-201ENST00000524813 PAFAH1B1P43034 410 aa20.21■□□□□ 0.83
PCDHB18P-201ENST00000524813 C8orf74Q6P047 294 aa20.21■□□□□ 0.83
PCDHB18P-201ENST00000524813 GPIHBP1Q8IV16 184 aa20.21■□□□□ 0.83
PCDHB18P-201ENST00000524813 CCDC47Q96A33 483 aaKnown RBP20.21■□□□□ 0.83
PCDHB18P-201ENST00000524813 PLCG1P19174 1290 aa20.2■□□□□ 0.82
PCDHB18P-201ENST00000524813 TNFRSF8P28908 595 aa20.2■□□□□ 0.82
PCDHB18P-201ENST00000524813 ATP1A2P50993 1020 aa20.2■□□□□ 0.82
PCDHB18P-201ENST00000524813 INF2Q27J81 1249 aa20.2■□□□□ 0.82
PCDHB18P-201ENST00000524813 KCTD16Q68DU8 428 aa20.2■□□□□ 0.82
PCDHB18P-201ENST00000524813 KCNV1Q6PIU1 500 aa20.2■□□□□ 0.82
PCDHB18P-201ENST00000524813 RBM12Q9NTZ6 932 aaKnown RBP20.2■□□□□ 0.82
PCDHB18P-201ENST00000524813 A6NNZ2 444 aa20.2■□□□□ 0.82
PCDHB18P-201ENST00000524813 ORC4O43929 436 aa20.2■□□□□ 0.82
PCDHB18P-201ENST00000524813 AKR1B10O60218 316 aa20.2■□□□□ 0.82
PCDHB18P-201ENST00000524813 SF3B2Q13435 895 aaKnown RBP20.2■□□□□ 0.82
PCDHB18P-201ENST00000524813 TUBB8Q3ZCM7 444 aa20.2■□□□□ 0.82
PCDHB18P-201ENST00000524813 CCDC152Q4G0S7 254 aa20.2■□□□□ 0.82
PCDHB18P-201ENST00000524813 FAM207AQ9NSI2 230 aaPredicted RBP20.2■□□□□ 0.82
PCDHB18P-201ENST00000524813 LCA5LO95447 670 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 KIF5BP33176 963 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 ASIC1P78348 528 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 NNTQ13423 1086 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 B4GALNT4Q76KP1 1039 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 ANKRD13CQ8N6S4 541 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 IQCDQ96DY2 449 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 TRIM9Q9C026 710 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 SH3GLB2Q9NR46 395 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 PCDHA6Q9UN73 950 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 PCDHA8Q9Y5H6 950 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 M0R2N6 131 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 KRT14P02533 472 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 KRT27Q7Z3Y8 459 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 ZNF384Q8TF68 577 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 MYCBPQ99417 103 aaPredicted RBP20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 SALL4Q9UJQ4 1053 aa20.19■□□□□ 0.82
PCDHB18P-201ENST00000524813 CNTNAP4Q9C0A0 1308 aa20.18■□□□□ 0.82
PCDHB18P-201ENST00000524813 COL1A1P02452 1464 aaPredicted RBP20.18■□□□□ 0.82
PCDHB18P-201ENST00000524813 MAGEA1P43355 309 aa20.18■□□□□ 0.82
PCDHB18P-201ENST00000524813 MNAT1P51948 309 aa20.18■□□□□ 0.82
PCDHB18P-201ENST00000524813 CABP7Q86V35 215 aa20.18■□□□□ 0.82
PCDHB18P-201ENST00000524813 CUEDC2Q9H467 287 aa20.18■□□□□ 0.82
PCDHB18P-201ENST00000524813 SIK3Q9Y2K2 1263 aa20.18■□□□□ 0.82
PCDHB18P-201ENST00000524813 CAPN7Q9Y6W3 813 aa20.18■□□□□ 0.82
PCDHB18P-201ENST00000524813 ZNF804BA4D1E1 1349 aa20.18■□□□□ 0.82
PCDHB18P-201ENST00000524813 FLT1P17948 1338 aa20.18■□□□□ 0.82
PCDHB18P-201ENST00000524813 WTIPA6NIX2 430 aaPredicted RBP20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 GNPATO15228 680 aa20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 ZEB2O60315 1214 aa20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 VWA3BQ502W6 1294 aa20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 CNPY4Q8N129 248 aa20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 HPS3Q969F9 1004 aa20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 MS4A14Q96JA4 679 aa20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 CCDC43Q96MW1 224 aaKnown RBP20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 TLR10Q9BXR5 811 aa20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 MMRN2Q9H8L6 949 aa20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 CACNA1SQ13698 1873 aa20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 LRRC53A6NM62 1247 aa20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 GLE1Q53GS7 698 aaKnown RBP20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 RRAGAQ7L523 313 aa20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 C7orf25Q9BPX7 421 aa20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 SEMA6BQ9H3T3 888 aa20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 MAGEF1Q9HAY2 307 aa20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 NIP7Q9Y221 180 aaKnown RBP eCLIP20.17■□□□□ 0.82
PCDHB18P-201ENST00000524813 LOC102724159A0A0B4J2E5 919 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 TSPY2A6NKD2 308 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 KIAA0754O94854 1291 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 GLI1P08151 1106 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 FAM153BP0C7A2 387 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 CYP2D6P10635 497 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 PWP2Q15269 919 aaKnown RBP20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 TXNRD1Q16881 649 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 FAM153CQ494X1 144 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 CFAP58Q5T655 872 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 RCSD1Q6JBY9 416 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 CCDC91Q7Z6B0 441 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 IFT20Q8IY31 132 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 STAG2Q8N3U4 1231 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 RNPC3Q96LT9 517 aaKnown RBP20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 NDST4Q9H3R1 872 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 POLD4Q9HCU8 107 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 TCP11L1Q9NUJ3 509 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 FAM153AQ9UHL3 310 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 NFU1Q9UMS0 254 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 SCN7AQ01118 1682 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 ATXN2Q99700 1313 aaKnown RBP20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 MYH10P35580 1976 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 USP8P40818 1118 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 CARSP49589 748 aaKnown RBP20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 KLHDC7AQ5VTJ3 777 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 KDM7AQ6ZMT4 941 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 OTUD6BQ8N6M0 293 aa20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 PRPF38AQ8NAV1 312 aaKnown RBP20.16■□□□□ 0.82
PCDHB18P-201ENST00000524813 MTMR8Q96EF0 704 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms