RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 CCDC73Q6ZRK6 1079 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 PLIN2Q99541 437 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 RCOR1Q9UKL0 485 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 RABGAP1Q9Y3P9 1069 aa10.61□□□□□ -0.71
SDCBP-212ENST00000523483 POTEB2H3BUK9 544 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 DDX39AO00148 427 aaKnown RBP10.6□□□□□ -0.71
SDCBP-212ENST00000523483 FOSP01100 380 aaPredicted RBP10.6□□□□□ -0.71
SDCBP-212ENST00000523483 SP4Q02446 784 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 CALCRLQ16602 461 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 ANKRD23Q86SG2 305 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 KRI1Q8N9T8 703 aaKnown RBP10.6□□□□□ -0.71
SDCBP-212ENST00000523483 EHMT1Q9H9B1 1298 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 MYPNQ86TC9 1320 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 TECP42680 631 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 NASPP49321 788 aaPredicted RBP10.6□□□□□ -0.71
SDCBP-212ENST00000523483 SREBF2Q12772 1141 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 ATL3Q6DD88 541 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 IL31RAQ8NI17 732 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 GPT2Q8TD30 523 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.6□□□□□ -0.71
SDCBP-212ENST00000523483 PHIPQ8WWQ0 1821 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 CHMP2AO43633 222 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 LIG1P18858 919 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 TRAPPC10P48553 1259 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 CLK2P49760 499 aaKnown RBP10.6□□□□□ -0.71
SDCBP-212ENST00000523483 OAZ1P54368 228 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 CCNA1P78396 465 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 DTHD1Q6ZMT9 781 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 IFNL1Q8IU54 200 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 ADAMTS5Q9UNA0 930 aa10.6□□□□□ -0.71
SDCBP-212ENST00000523483 PTPAQ15257 358 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 CLEC17AQ6ZS10 378 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 MMP19Q99542 508 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 CSRNP2Q9H175 543 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 CYP39A1Q9NYL5 469 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 PP2D1A8MPX8 630 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 FAM86B1E9PN63 330 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 FAM86B2P0C5J1 330 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 NOGQ13253 232 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 USP49Q70CQ1 688 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 RIOX2Q8IUF8 465 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 DACT1Q9NYF0 836 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 TRPA1O75762 1119 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 CNMDO75829 334 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 OR52Z1P0C646 297 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 FCER1AP12319 257 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 CRHR2Q13324 411 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 PLA2G4DQ86XP0 818 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 CREBZFQ9NS37 354 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 PNMA2Q9UL42 364 aa10.59□□□□□ -0.71
SDCBP-212ENST00000523483 PTPRFP10586 1907 aa10.58□□□□□ -0.72
SDCBP-212ENST00000523483 FAM155AB1AL88 458 aaPredicted RBP10.58□□□□□ -0.72
SDCBP-212ENST00000523483 DPP9Q86TI2 863 aa10.58□□□□□ -0.72
SDCBP-212ENST00000523483 CHST13Q8NET6 341 aa10.58□□□□□ -0.72
SDCBP-212ENST00000523483 EPSTI1Q96J88 318 aa10.58□□□□□ -0.72
SDCBP-212ENST00000523483 FBXO40Q9UH90 709 aa10.58□□□□□ -0.72
SDCBP-212ENST00000523483 POTEMA6NI47 508 aa10.58□□□□□ -0.72
SDCBP-212ENST00000523483 PIK3CDO00329 1044 aa10.58□□□□□ -0.72
SDCBP-212ENST00000523483 NR1I2O75469 434 aa10.58□□□□□ -0.72
SDCBP-212ENST00000523483 SREBF1P36956 1147 aa10.58□□□□□ -0.72
SDCBP-212ENST00000523483 GCLCP48506 637 aaPredicted RBP10.58□□□□□ -0.72
SDCBP-212ENST00000523483 FAM177A1Q8N128 213 aaPredicted RBP10.58□□□□□ -0.72
SDCBP-212ENST00000523483 MRPS27Q92552 414 aaKnown RBP10.58□□□□□ -0.72
SDCBP-212ENST00000523483 ERCC4Q92889 916 aaPredicted RBP10.58□□□□□ -0.72
SDCBP-212ENST00000523483 TTC12Q9H892 705 aaPredicted RBP10.58□□□□□ -0.72
SDCBP-212ENST00000523483 ZFYVE28Q9HCC9 887 aa10.58□□□□□ -0.72
SDCBP-212ENST00000523483 TCEAL9Q9UHQ7 104 aa10.58□□□□□ -0.72
SDCBP-212ENST00000523483 TBC1D8O95759 1140 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 BMP15O95972 392 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 HSD17B4P51659 736 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 ATP2C1P98194 919 aaPredicted RBP10.57□□□□□ -0.72
SDCBP-212ENST00000523483 DHX8Q14562 1220 aaKnown RBP10.57□□□□□ -0.72
SDCBP-212ENST00000523483 SEPT14Q6ZU15 432 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 NSUN6Q8TEA1 469 aaKnown RBP10.57□□□□□ -0.72
SDCBP-212ENST00000523483 SDF4Q9BRK5 362 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 TRPM7Q96QT4 1865 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 KINO60870 393 aaKnown RBP10.57□□□□□ -0.72
SDCBP-212ENST00000523483 SLC25A27O95847 323 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 MBD3O95983 291 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 NR3C2P08235 984 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 UBA7P41226 1012 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 NDUFA8P51970 172 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 ADALQ6DHV7 355 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 GOLPH3LQ9H4A5 285 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 PXMP2Q9NR77 195 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 FBXO2Q9UK22 296 aaPredicted RBP10.57□□□□□ -0.72
SDCBP-212ENST00000523483 SAMM50Q9Y512 469 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 ELP1O95163 1332 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 ATP2A1O14983 1001 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 PTMSP20962 102 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 TMEM266Q2M3C6 531 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 CEP55Q53EZ4 464 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 RGS22Q8NE09 1264 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 SYMPKQ92797 1274 aaKnown RBP10.57□□□□□ -0.72
SDCBP-212ENST00000523483 PDCD2LQ9BRP1 358 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 WDR11Q9BZH6 1224 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 FAM13BQ9NYF5 915 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 PCDHA12Q9UN75 941 aa10.57□□□□□ -0.72
SDCBP-212ENST00000523483 PFKFB1P16118 471 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 USP11P51784 963 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms