RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 ITGA7Q13683 1181 aa18.84■□□□□ 0.61
CLN8-206ENST00000523237 NECTIN1Q15223 517 aa18.84■□□□□ 0.61
CLN8-206ENST00000523237 SHHQ15465 462 aa18.84■□□□□ 0.61
CLN8-206ENST00000523237 BRDTQ58F21 947 aaPredicted RBP18.84■□□□□ 0.61
CLN8-206ENST00000523237 ARHGEF16Q5VV41 709 aa18.84■□□□□ 0.61
CLN8-206ENST00000523237 CREB3L3Q68CJ9 461 aa18.84■□□□□ 0.61
CLN8-206ENST00000523237 SAMD3Q8N6K7 520 aa18.84■□□□□ 0.61
CLN8-206ENST00000523237 SLC43A3Q8NBI5 491 aa18.84■□□□□ 0.61
CLN8-206ENST00000523237 MAP3K14Q99558 947 aa18.84■□□□□ 0.61
CLN8-206ENST00000523237 LY9Q9HBG7 655 aa18.84■□□□□ 0.61
CLN8-206ENST00000523237 POLR3EQ9NVU0 708 aa18.84■□□□□ 0.61
CLN8-206ENST00000523237 MAP3K20Q9NYL2 800 aaKnown RBP18.84■□□□□ 0.61
CLN8-206ENST00000523237 COL20A1Q9P218 1284 aa18.84■□□□□ 0.61
CLN8-206ENST00000523237 LAMA3Q16787 3333 aa18.84■□□□□ 0.61
CLN8-206ENST00000523237 TIMP1P01033 207 aa18.83■□□□□ 0.6
CLN8-206ENST00000523237 HSD17B4P51659 736 aa18.83■□□□□ 0.6
CLN8-206ENST00000523237 GHRHRQ02643 423 aa18.83■□□□□ 0.6
CLN8-206ENST00000523237 TTLL4Q14679 1199 aa18.83■□□□□ 0.6
CLN8-206ENST00000523237 STXBP2Q15833 593 aa18.83■□□□□ 0.6
CLN8-206ENST00000523237 ZNF654Q8IZM8 581 aa18.83■□□□□ 0.6
CLN8-206ENST00000523237 TMTC2Q8N394 836 aa18.83■□□□□ 0.6
CLN8-206ENST00000523237 CTCFLQ8NI51 663 aaPredicted RBP18.83■□□□□ 0.6
CLN8-206ENST00000523237 CCDC136Q96JN2 1154 aa18.83■□□□□ 0.6
CLN8-206ENST00000523237 TMEM87BQ96K49 555 aa18.83■□□□□ 0.6
CLN8-206ENST00000523237 PIGSQ96S52 555 aa18.83■□□□□ 0.6
CLN8-206ENST00000523237 GPHNQ9NQX3 736 aaPredicted RBP18.83■□□□□ 0.6
CLN8-206ENST00000523237 PNMA6FA0A0J9YX94 578 aa18.82■□□□□ 0.6
CLN8-206ENST00000523237 OPLAHO14841 1288 aa18.82■□□□□ 0.6
CLN8-206ENST00000523237 CYTH3O43739 400 aa18.82■□□□□ 0.6
CLN8-206ENST00000523237 DDAH1O94760 285 aa18.82■□□□□ 0.6
CLN8-206ENST00000523237 CD4P01730 458 aa18.82■□□□□ 0.6
CLN8-206ENST00000523237 EIF2AK2P19525 551 aaKnown RBP18.82■□□□□ 0.6
CLN8-206ENST00000523237 KIF5BP33176 963 aa18.82■□□□□ 0.6
CLN8-206ENST00000523237 SLC35G1Q2M3R5 365 aa18.82■□□□□ 0.6
CLN8-206ENST00000523237 C9orf50Q5SZB4 431 aa18.82■□□□□ 0.6
CLN8-206ENST00000523237 RNF20Q5VTR2 975 aa18.82■□□□□ 0.6
CLN8-206ENST00000523237 NFXL1Q6ZNB6 911 aa18.82■□□□□ 0.6
CLN8-206ENST00000523237 PXMP2Q9NR77 195 aa18.82■□□□□ 0.6
CLN8-206ENST00000523237 GRIN2DO15399 1336 aa18.81■□□□□ 0.6
CLN8-206ENST00000523237 CCDC69A6NI79 296 aa18.81■□□□□ 0.6
CLN8-206ENST00000523237 CDC45O75419 566 aa18.81■□□□□ 0.6
CLN8-206ENST00000523237 PSMC6P62333 389 aa18.81■□□□□ 0.6
CLN8-206ENST00000523237 PURAQ00577 322 aaKnown RBP18.81■□□□□ 0.6
CLN8-206ENST00000523237 MFSD5Q6N075 450 aa18.81■□□□□ 0.6
CLN8-206ENST00000523237 DEFB123Q8N688 67 aa18.81■□□□□ 0.6
CLN8-206ENST00000523237 COPS5Q92905 334 aa18.81■□□□□ 0.6
CLN8-206ENST00000523237 A6NJR5 290 aa18.8■□□□□ 0.6
CLN8-206ENST00000523237 SH2B2O14492 632 aaPredicted RBP18.8■□□□□ 0.6
CLN8-206ENST00000523237 KPNA6O60684 536 aa18.8■□□□□ 0.6
CLN8-206ENST00000523237 EIF3JO75822 258 aaKnown RBP18.8■□□□□ 0.6
CLN8-206ENST00000523237 ARIH2O95376 493 aa18.8■□□□□ 0.6
CLN8-206ENST00000523237 NR3C2P08235 984 aa18.8■□□□□ 0.6
CLN8-206ENST00000523237 MYL3P08590 195 aa18.8■□□□□ 0.6
CLN8-206ENST00000523237 LIFRP42702 1097 aa18.8■□□□□ 0.6
CLN8-206ENST00000523237 SEPT14Q6ZU15 432 aa18.8■□□□□ 0.6
CLN8-206ENST00000523237 MTG1Q9BT17 334 aaPredicted RBP18.8■□□□□ 0.6
CLN8-206ENST00000523237 MYL10Q9BUA6 226 aa18.8■□□□□ 0.6
CLN8-206ENST00000523237 SCN10AQ9Y5Y9 1956 aa18.79■□□□□ 0.6
CLN8-206ENST00000523237 GCOM1H8Y6P7 765 aaPredicted RBP18.79■□□□□ 0.6
CLN8-206ENST00000523237 POLR2MP0CAP2 368 aa18.79■□□□□ 0.6
CLN8-206ENST00000523237 CALM1P0DP23 149 aa18.79■□□□□ 0.6
CLN8-206ENST00000523237 CALM2P0DP24 149 aa18.79■□□□□ 0.6
CLN8-206ENST00000523237 CALM3P0DP25 149 aa18.79■□□□□ 0.6
CLN8-206ENST00000523237 SMARCA1P28370 1054 aa18.79■□□□□ 0.6
CLN8-206ENST00000523237 HOXA13P31271 388 aaPredicted RBP18.79■□□□□ 0.6
CLN8-206ENST00000523237 GNAQP50148 359 aa18.79■□□□□ 0.6
CLN8-206ENST00000523237 EPHB4P54760 987 aa18.79■□□□□ 0.6
CLN8-206ENST00000523237 PPIGQ13427 754 aaKnown RBP eCLIP18.79■□□□□ 0.6
CLN8-206ENST00000523237 CCDC62Q6P9F0 684 aa18.79■□□□□ 0.6
CLN8-206ENST00000523237 TMEM199Q8N511 208 aa18.79■□□□□ 0.6
CLN8-206ENST00000523237 RNPC3Q96LT9 517 aaKnown RBP18.79■□□□□ 0.6
CLN8-206ENST00000523237 LZTS2Q9BRK4 669 aa18.79■□□□□ 0.6
CLN8-206ENST00000523237 SPZ1Q9BXG8 430 aa18.79■□□□□ 0.6
CLN8-206ENST00000523237 PPP1R12CQ9BZL4 782 aa18.79■□□□□ 0.6
CLN8-206ENST00000523237 MYH7BA7E2Y1 1941 aa18.78■□□□□ 0.6
CLN8-206ENST00000523237 B4GALT4O60513 344 aa18.78■□□□□ 0.6
CLN8-206ENST00000523237 GH1P01241 217 aa18.78■□□□□ 0.6
CLN8-206ENST00000523237 LY6KQ17RY6 165 aa18.78■□□□□ 0.6
CLN8-206ENST00000523237 Q7L0L9 218 aa18.78■□□□□ 0.6
CLN8-206ENST00000523237 PIBF1Q8WXW3 757 aa18.78■□□□□ 0.6
CLN8-206ENST00000523237 RRP36Q96EU6 259 aaKnown RBP18.78■□□□□ 0.6
CLN8-206ENST00000523237 PDCD2LQ9BRP1 358 aa18.78■□□□□ 0.6
CLN8-206ENST00000523237 HIPK3Q9H422 1215 aa18.78■□□□□ 0.6
CLN8-206ENST00000523237 SEC63Q9UGP8 760 aaKnown RBP18.78■□□□□ 0.6
CLN8-206ENST00000523237 COL9A3Q14050 684 aaPredicted RBP18.77■□□□□ 0.6
CLN8-206ENST00000523237 TRPV6Q9H1D0 765 aa18.77■□□□□ 0.6
CLN8-206ENST00000523237 ALDH8A1Q9H2A2 487 aaPredicted RBP18.77■□□□□ 0.6
CLN8-206ENST00000523237 SLC12A7Q9Y666 1083 aa18.77■□□□□ 0.6
CLN8-206ENST00000523237 MRVI1Q9Y6F6 885 aa18.77■□□□□ 0.6
CLN8-206ENST00000523237 SUPT20HL2P0C7V6 817 aa18.76■□□□□ 0.59
CLN8-206ENST00000523237 MYCLP12524 364 aaPredicted RBP18.76■□□□□ 0.59
CLN8-206ENST00000523237 CSF2RAP15509 400 aa18.76■□□□□ 0.59
CLN8-206ENST00000523237 CYP2C18P33260 490 aa18.76■□□□□ 0.59
CLN8-206ENST00000523237 SMAD3P84022 425 aaKnown RBP18.76■□□□□ 0.59
CLN8-206ENST00000523237 PGM5Q15124 567 aa18.76■□□□□ 0.59
CLN8-206ENST00000523237 FAM109BQ6ICB4 259 aaPredicted RBP18.76■□□□□ 0.59
CLN8-206ENST00000523237 FCHSD1Q86WN1 690 aa18.76■□□□□ 0.59
CLN8-206ENST00000523237 AFG1LQ8WV93 481 aa18.76■□□□□ 0.59
CLN8-206ENST00000523237 NEK1Q96PY6 1258 aa18.76■□□□□ 0.59
CLN8-206ENST00000523237 LRRC2Q9BYS8 371 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms