RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 MTG1Q9BT17 334 aaPredicted RBP18.08■□□□□ 0.48
MRPS28-209ENST00000522987 CHD9Q3L8U1 2897 aa18.08■□□□□ 0.48
MRPS28-209ENST00000522987 RBM47A0AV96 593 aaKnown RBP18.07■□□□□ 0.48
MRPS28-209ENST00000522987 MFAP1P55081 439 aaKnown RBP18.07■□□□□ 0.48
MRPS28-209ENST00000522987 TTLL4Q14679 1199 aa18.07■□□□□ 0.48
MRPS28-209ENST00000522987 CHST3Q7LGC8 479 aa18.07■□□□□ 0.48
MRPS28-209ENST00000522987 VWCEQ96DN2 955 aa18.07■□□□□ 0.48
MRPS28-209ENST00000522987 MTIF3Q9H2K0 278 aaKnown RBP18.07■□□□□ 0.48
MRPS28-209ENST00000522987 KAT14Q9H8E8 782 aa18.07■□□□□ 0.48
MRPS28-209ENST00000522987 DOCK5Q9H7D0 1870 aa18.07■□□□□ 0.48
MRPS28-209ENST00000522987 WDR19Q8NEZ3 1342 aa18.06■□□□□ 0.48
MRPS28-209ENST00000522987 NUCB1Q02818 461 aa18.06■□□□□ 0.48
MRPS28-209ENST00000522987 RAB30Q15771 203 aa18.06■□□□□ 0.48
MRPS28-209ENST00000522987 GPATCH4Q5T3I0 446 aaKnown RBP18.06■□□□□ 0.48
MRPS28-209ENST00000522987 SEPT14Q6ZU15 432 aa18.06■□□□□ 0.48
MRPS28-209ENST00000522987 ADGRF4Q8IZF3 695 aa18.06■□□□□ 0.48
MRPS28-209ENST00000522987 MICALL1Q8N3F8 863 aa18.06■□□□□ 0.48
MRPS28-209ENST00000522987 SCFD2Q8WU76 684 aa18.06■□□□□ 0.48
MRPS28-209ENST00000522987 TAAR1Q96RJ0 339 aa18.06■□□□□ 0.48
MRPS28-209ENST00000522987 SLC28A3Q9HAS3 691 aa18.06■□□□□ 0.48
MRPS28-209ENST00000522987 COL20A1Q9P218 1284 aa18.06■□□□□ 0.48
MRPS28-209ENST00000522987 SLC4A7Q9Y6M7 1214 aa18.06■□□□□ 0.48
MRPS28-209ENST00000522987 SORBS3O60504 671 aa18.05■□□□□ 0.48
MRPS28-209ENST00000522987 EDNRBP24530 442 aa18.05■□□□□ 0.48
MRPS28-209ENST00000522987 LY6KQ17RY6 165 aa18.05■□□□□ 0.48
MRPS28-209ENST00000522987 QRICH1Q2TAL8 776 aa18.05■□□□□ 0.48
MRPS28-209ENST00000522987 IQCA1Q86XH1 822 aa18.05■□□□□ 0.48
MRPS28-209ENST00000522987 ZSCAN10Q96SZ4 725 aaPredicted RBP18.05■□□□□ 0.48
MRPS28-209ENST00000522987 MPHOSPH6Q99547 160 aaKnown RBP18.05■□□□□ 0.48
MRPS28-209ENST00000522987 IL25Q9H293 177 aa18.05■□□□□ 0.48
MRPS28-209ENST00000522987 CERS4Q9HA82 394 aa18.05■□□□□ 0.48
MRPS28-209ENST00000522987 RAD50Q92878 1312 aa18.04■□□□□ 0.48
MRPS28-209ENST00000522987 PCP11498 1178 aaKnown RBP18.04■□□□□ 0.48
MRPS28-209ENST00000522987 BRDTQ58F21 947 aaPredicted RBP18.04■□□□□ 0.48
MRPS28-209ENST00000522987 PPP2R2DQ66LE6 453 aa18.04■□□□□ 0.48
MRPS28-209ENST00000522987 DGKHQ86XP1 1220 aa18.04■□□□□ 0.48
MRPS28-209ENST00000522987 RPUSD2Q8IZ73 545 aaKnown RBP18.04■□□□□ 0.48
MRPS28-209ENST00000522987 ENAHQ8N8S7 591 aaPredicted RBP18.04■□□□□ 0.48
MRPS28-209ENST00000522987 DNERQ8NFT8 737 aa18.04■□□□□ 0.48
MRPS28-209ENST00000522987 AFG1LQ8WV93 481 aa18.04■□□□□ 0.48
MRPS28-209ENST00000522987 ZSWIM5Q9P217 1185 aa18.04■□□□□ 0.48
MRPS28-209ENST00000522987 RFXAPO00287 272 aa18.03■□□□□ 0.48
MRPS28-209ENST00000522987 SUPT20HL2P0C7V6 817 aa18.03■□□□□ 0.48
MRPS28-209ENST00000522987 ATP2A2P16615 1042 aaKnown RBP18.03■□□□□ 0.48
MRPS28-209ENST00000522987 EIF2AK2P19525 551 aaKnown RBP18.03■□□□□ 0.48
MRPS28-209ENST00000522987 STAG2Q8N3U4 1231 aa18.03■□□□□ 0.48
MRPS28-209ENST00000522987 SYTL5Q8TDW5 730 aaPredicted RBP18.03■□□□□ 0.48
MRPS28-209ENST00000522987 NOD1Q9Y239 953 aa18.03■□□□□ 0.48
MRPS28-209ENST00000522987 VCANP13611 3396 aa18.02■□□□□ 0.48
MRPS28-209ENST00000522987 ABCB11O95342 1321 aa18.02■□□□□ 0.48
MRPS28-209ENST00000522987 CHD7Q9P2D1 2997 aa18.02■□□□□ 0.48
MRPS28-209ENST00000522987 LOC102724159A0A0B4J2E5 919 aa18.02■□□□□ 0.48
MRPS28-209ENST00000522987 NKRFO15226 690 aaKnown RBP eCLIP18.02■□□□□ 0.48
MRPS28-209ENST00000522987 PWP2Q15269 919 aaKnown RBP18.02■□□□□ 0.48
MRPS28-209ENST00000522987 IMMTQ16891 758 aaKnown RBP18.02■□□□□ 0.48
MRPS28-209ENST00000522987 FBXO11Q86XK2 927 aa18.02■□□□□ 0.48
MRPS28-209ENST00000522987 ZFP91Q96JP5 570 aaPredicted RBP18.02■□□□□ 0.48
MRPS28-209ENST00000522987 SEZ6LQ9BYH1 1024 aa18.02■□□□□ 0.48
MRPS28-209ENST00000522987 FTOQ9C0B1 505 aaKnown RBP eCLIP18.02■□□□□ 0.48
MRPS28-209ENST00000522987 OSBPL3Q9H4L5 887 aa18.02■□□□□ 0.48
MRPS28-209ENST00000522987 JMJD4Q9H9V9 463 aa18.02■□□□□ 0.48
MRPS28-209ENST00000522987 PNMA2Q9UL42 364 aa18.02■□□□□ 0.48
MRPS28-209ENST00000522987 PRRC2BQ5JSZ5 2229 aaKnown RBP18.02■□□□□ 0.47
MRPS28-209ENST00000522987 A6NJR5 290 aa18.01■□□□□ 0.47
MRPS28-209ENST00000522987 B4DLN1 442 aa18.01■□□□□ 0.47
MRPS28-209ENST00000522987 CFBP00751 764 aa18.01■□□□□ 0.47
MRPS28-209ENST00000522987 MMP3P08254 477 aa18.01■□□□□ 0.47
MRPS28-209ENST00000522987 PARP1P09874 1014 aaKnown RBP18.01■□□□□ 0.47
MRPS28-209ENST00000522987 MRPL12P52815 198 aaKnown RBP18.01■□□□□ 0.47
MRPS28-209ENST00000522987 ASPRV1Q53RT3 343 aa18.01■□□□□ 0.47
MRPS28-209ENST00000522987 TICAM2Q86XR7 235 aa18.01■□□□□ 0.47
MRPS28-209ENST00000522987 RMDN3Q96TC7 470 aa18.01■□□□□ 0.47
MRPS28-209ENST00000522987 UBAC1Q9BSL1 405 aa18.01■□□□□ 0.47
MRPS28-209ENST00000522987 DSCC1Q9BVC3 393 aa18.01■□□□□ 0.47
MRPS28-209ENST00000522987 COL4A4P53420 1690 aaPredicted RBP18■□□□□ 0.47
MRPS28-209ENST00000522987 CA3P07451 260 aa18■□□□□ 0.47
MRPS28-209ENST00000522987 ARHGAP1Q07960 439 aa18■□□□□ 0.47
MRPS28-209ENST00000522987 TJAP1Q5JTD0 557 aa18■□□□□ 0.47
MRPS28-209ENST00000522987 ARHGEF16Q5VV41 709 aa18■□□□□ 0.47
MRPS28-209ENST00000522987 CCDC62Q6P9F0 684 aa18■□□□□ 0.47
MRPS28-209ENST00000522987 CYB5R4Q7L1T6 521 aa18■□□□□ 0.47
MRPS28-209ENST00000522987 RETREG2Q8NC44 543 aa18■□□□□ 0.47
MRPS28-209ENST00000522987 ALG1Q9BT22 464 aa18■□□□□ 0.47
MRPS28-209ENST00000522987 TTC28Q96AY4 2481 aa17.99■□□□□ 0.47
MRPS28-209ENST00000522987 REV3LO60673 3130 aa17.99■□□□□ 0.47
MRPS28-209ENST00000522987 HIP1O00291 1037 aa17.99■□□□□ 0.47
MRPS28-209ENST00000522987 ARHGEF15O94989 841 aa17.99■□□□□ 0.47
MRPS28-209ENST00000522987 GH1P01241 217 aa17.99■□□□□ 0.47
MRPS28-209ENST00000522987 IQCF3P0C7M6 154 aa17.99■□□□□ 0.47
MRPS28-209ENST00000522987 MYCLP12524 364 aaPredicted RBP17.99■□□□□ 0.47
MRPS28-209ENST00000522987 PDE4AP27815 886 aa17.99■□□□□ 0.47
MRPS28-209ENST00000522987 PTGISQ16647 500 aa17.99■□□□□ 0.47
MRPS28-209ENST00000522987 CCDC178Q5BJE1 867 aa17.99■□□□□ 0.47
MRPS28-209ENST00000522987 IFIT1BQ5T764 474 aaKnown RBP17.99■□□□□ 0.47
MRPS28-209ENST00000522987 GDF6Q6KF10 455 aaPredicted RBP17.99■□□□□ 0.47
MRPS28-209ENST00000522987 NFRKBQ6P4R8 1299 aa17.99■□□□□ 0.47
MRPS28-209ENST00000522987 TMCO2Q7Z6W1 182 aaPredicted RBP17.99■□□□□ 0.47
MRPS28-209ENST00000522987 NSUN6Q8TEA1 469 aaKnown RBP17.99■□□□□ 0.47
MRPS28-209ENST00000522987 ANKS1AQ92625 1134 aa17.99■□□□□ 0.47
MRPS28-209ENST00000522987 SYMPKQ92797 1274 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms