RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 LTBRP36941 435 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 STRN3Q13033 797 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 FAM50AQ14320 339 aaKnown RBP4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 CFAP100Q494V2 611 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 ODR4Q5SWX8 454 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 OVCH1Q7RTY7 1134 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 PPIL6Q8IXY8 311 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 CBARPQ8N350 705 aaPredicted RBP4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 SMC1BQ8NDV3 1235 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 GIMAP7Q8NHV1 300 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 DSCC1Q9BVC3 393 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 CLEC1BQ9P126 229 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 MCM8Q9UJA3 840 aa4.79□□□□□ -1.64
HMGN1P28-201ENST00000521340 ZNF891A8MT65 544 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 GABRDO14764 452 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 ZEB2O60315 1214 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 ADCYAP1R1P41586 468 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 GUCY2FP51841 1108 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 GUCY1A3Q02108 690 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 TEKQ02763 1124 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 TTF1Q15361 905 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 CPSF6Q16630 551 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 CYP27C1Q4G0S4 372 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 CCDC181Q5TID7 509 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 RNF219Q5W0B1 726 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 EEF1DP3Q658K8 133 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 ZPBP2Q6X784 338 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 CBLL1Q75N03 491 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 IFNL3Q8IZI9 196 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 FAM181AQ8N9Y4 354 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 WDR66Q8TBY9 1149 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 JDP2Q8WYK2 163 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 HSPA12BQ96MM6 686 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 G6PC3Q9BUM1 346 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 CELF4Q9BZC1 486 aaKnown RBP4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 CCDC8Q9H0W5 538 aaPredicted RBP4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 SLC5A4Q9NY91 659 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 SAMD15Q9P1V8 674 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 PPARGC1AQ9UBK2 798 aaKnown RBP4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 EBF1Q9UH73 591 aa4.78□□□□□ -1.64
HMGN1P28-201ENST00000521340 B4E1Z4 1266 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 M0R2C6 588 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 FZD9O00144 591 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 CYP26A1O43174 497 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 BRINP1O60477 761 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 NOP2P46087 812 aaKnown RBP4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 NEK4P51957 841 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 HABP4Q5JVS0 413 aaKnown RBP4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 PIK3R6Q5UE93 754 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 OTOP1Q7RTM1 612 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 THAP5Q7Z6K1 395 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 FMNL3Q8IVF7 1028 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 Q8N1Y9 231 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 NXPE1Q8N323 547 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 IGSF22Q8N9C0 903 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 ATL2Q8NHH9 583 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 WNK4Q96J92 1243 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 PTCHD1Q96NR3 888 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 FOXP3Q9BZS1 431 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 VTA1Q9NP79 307 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 AP5S1Q9NUS5 200 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 B4GALT6Q9UBX8 382 aa4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 ANGEL1Q9UNK9 670 aaKnown RBP4.77□□□□□ -1.65
HMGN1P28-201ENST00000521340 TNKSO95271 1327 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 PITPNM2Q9BZ72 1349 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 TCRBV5S4A2TA0A5A2 114 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 C7orf72A4D263 438 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 MEFVO15553 781 aaPredicted RBP4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 TGM5O43548 720 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 SYPP08247 313 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 ZBTB48P10074 688 aaPredicted RBP4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 ATP2A2P16615 1042 aaKnown RBP4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 TPP2P29144 1249 aaPredicted RBP4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 ERVK-21P61565 698 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 LACTBP83111 547 aaPredicted RBP4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 CYP27A1Q02318 531 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 KCNAB2Q13303 367 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 LRRC41Q15345 812 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 CT47A1Q5JQC4 288 aaPredicted RBP4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 IQCEQ6IPM2 695 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 NLRP10Q86W26 655 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 WFDC3Q8IUB2 231 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 PI4K2BQ8TCG2 481 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 COG1Q8WTW3 980 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 DIO2Q92813 273 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 TSR2Q969E8 191 aaKnown RBP4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 METTL22Q9BUU2 404 aaPredicted RBP4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 PUS7LQ9H0K6 701 aaKnown RBP4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 IFT22Q9H7X7 185 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 BSDC1Q9NW68 430 aaPredicted RBP4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 ZC3H7BQ9UGR2 993 aaKnown RBP4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 TCFL5Q9UL49 500 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 CBLCQ9ULV8 474 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 COQ6Q9Y2Z9 468 aa4.76□□□□□ -1.65
HMGN1P28-201ENST00000521340 ARID1BQ8NFD5 2236 aaPredicted RBP4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 DVL2O14641 736 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 AKAP10O43572 662 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 TSPAN6O43657 245 aa4.75□□□□□ -1.65
HMGN1P28-201ENST00000521340 PRKD3O94806 890 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms