RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 ITGB8P26012 769 aa20.97■□□□□ 0.95
VEGFA-222ENST00000520948 C1orf53Q5VUE5 145 aa20.97■□□□□ 0.95
VEGFA-222ENST00000520948 HOMER1Q86YM7 354 aa20.97■□□□□ 0.95
VEGFA-222ENST00000520948 MAF1Q9H063 256 aa20.97■□□□□ 0.95
VEGFA-222ENST00000520948 ACAD9Q9H845 621 aa20.97■□□□□ 0.95
VEGFA-222ENST00000520948 CNPY2Q9Y2B0 182 aa20.97■□□□□ 0.95
VEGFA-222ENST00000520948 UNC80Q8N2C7 3258 aa20.97■□□□□ 0.95
VEGFA-222ENST00000520948 DNAJC25-GNG10A0A024R161 153 aa20.96■□□□□ 0.95
VEGFA-222ENST00000520948 A0A1W2PQ45 241 aaPredicted RBP20.96■□□□□ 0.95
VEGFA-222ENST00000520948 A0A1W2PQY0 241 aa20.96■□□□□ 0.95
VEGFA-222ENST00000520948 PQBP1O60828 265 aaKnown RBP20.96■□□□□ 0.95
VEGFA-222ENST00000520948 LARGE1O95461 756 aa20.96■□□□□ 0.95
VEGFA-222ENST00000520948 CLTBP09497 229 aa20.96■□□□□ 0.95
VEGFA-222ENST00000520948 SCRN1Q12765 414 aa20.96■□□□□ 0.95
VEGFA-222ENST00000520948 STK3Q13188 491 aa20.96■□□□□ 0.95
VEGFA-222ENST00000520948 RGS22Q8NE09 1264 aa20.96■□□□□ 0.95
VEGFA-222ENST00000520948 HOMER2Q9NSB8 354 aa20.96■□□□□ 0.95
VEGFA-222ENST00000520948 ABCB11O95342 1321 aa20.96■□□□□ 0.95
VEGFA-222ENST00000520948 MCM3APO60318 1980 aa20.96■□□□□ 0.95
VEGFA-222ENST00000520948 PRPF3O43395 683 aaKnown RBP20.95■□□□□ 0.94
VEGFA-222ENST00000520948 ADAMTS4O75173 837 aa20.95■□□□□ 0.94
VEGFA-222ENST00000520948 TRAF1Q13077 416 aa20.95■□□□□ 0.94
VEGFA-222ENST00000520948 USH1GQ495M9 461 aa20.95■□□□□ 0.94
VEGFA-222ENST00000520948 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.95■□□□□ 0.943e-13■■□□□ 13.7
VEGFA-222ENST00000520948 DDX11Q96FC9 970 aa20.95■□□□□ 0.94
VEGFA-222ENST00000520948 SLKQ9H2G2 1235 aaPredicted RBP20.95■□□□□ 0.94
VEGFA-222ENST00000520948 A1CFQ9NQ94 594 aaKnown RBP20.95■□□□□ 0.94
VEGFA-222ENST00000520948 LIMCH1Q9UPQ0 1083 aa20.95■□□□□ 0.94
VEGFA-222ENST00000520948 PCDHA1Q9Y5I3 950 aa20.95■□□□□ 0.94
VEGFA-222ENST00000520948 V9GY48 417 aaPredicted RBP20.95■□□□□ 0.94
VEGFA-222ENST00000520948 SYNRGQ9UMZ2 1314 aa20.95■□□□□ 0.94
VEGFA-222ENST00000520948 hCG_1642624A0A1W2PR95 340 aa20.94■□□□□ 0.94
VEGFA-222ENST00000520948 NFIBO00712 420 aa20.94■□□□□ 0.94
VEGFA-222ENST00000520948 OPLAHO14841 1288 aa20.94■□□□□ 0.94
VEGFA-222ENST00000520948 EPHB4P54760 987 aa20.94■□□□□ 0.94
VEGFA-222ENST00000520948 PIBF1Q8WXW3 757 aa20.94■□□□□ 0.94
VEGFA-222ENST00000520948 CDX2Q99626 313 aaPredicted RBP20.94■□□□□ 0.94
VEGFA-222ENST00000520948 ZHX1Q9UKY1 873 aaPredicted RBP20.94■□□□□ 0.94
VEGFA-222ENST00000520948 MRPL11Q9Y3B7 192 aaKnown RBP20.94■□□□□ 0.94
VEGFA-222ENST00000520948 CD2BP2O95400 341 aaKnown RBP20.93■□□□□ 0.94
VEGFA-222ENST00000520948 SNAI1O95863 264 aaPredicted RBP20.93■□□□□ 0.94
VEGFA-222ENST00000520948 GHRHRQ02643 423 aa20.93■□□□□ 0.94
VEGFA-222ENST00000520948 PKN1Q16512 942 aa20.93■□□□□ 0.94
VEGFA-222ENST00000520948 NOL8Q76FK4 1167 aaKnown RBP20.93■□□□□ 0.94
VEGFA-222ENST00000520948 ANKRD35Q8N283 1001 aa20.93■□□□□ 0.94
VEGFA-222ENST00000520948 TBC1D5Q92609 795 aa20.93■□□□□ 0.94
VEGFA-222ENST00000520948 RNF26Q9BY78 433 aaPredicted RBP20.93■□□□□ 0.94
VEGFA-222ENST00000520948 CYP39A1Q9NYL5 469 aa20.93■□□□□ 0.94
VEGFA-222ENST00000520948 SEC63Q9UGP8 760 aaKnown RBP20.93■□□□□ 0.94
VEGFA-222ENST00000520948 MYADML2A6NDP7 307 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 ST18O60284 1047 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 CTDNEP1O95476 244 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 RAG1P15918 1043 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 ACLYP53396 1101 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 IRX5P78411 483 aaPredicted RBP20.92■□□□□ 0.94
VEGFA-222ENST00000520948 ST3GAL1Q11201 340 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 NECAB1Q8N987 351 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 FAM133AQ8N9E0 248 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 PHKBQ93100 1093 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 GTF3C6Q969F1 213 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 RNPC3Q96LT9 517 aaKnown RBP20.92■□□□□ 0.94
VEGFA-222ENST00000520948 ZSCAN31Q96LW9 406 aaPredicted RBP20.92■□□□□ 0.94
VEGFA-222ENST00000520948 COL25A1Q9BXS0 654 aaPredicted RBP20.92■□□□□ 0.94
VEGFA-222ENST00000520948 SEMA6BQ9H3T3 888 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 STARD7Q9NQZ5 370 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 TMEM39AQ9NV64 488 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 FAM184BQ9ULE4 1060 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 SYNGAP1Q96PV0 1343 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 LCTP09848 1927 aa20.92■□□□□ 0.94
VEGFA-222ENST00000520948 KIAA0355O15063 1070 aa20.91■□□□□ 0.94
VEGFA-222ENST00000520948 SMAD3P84022 425 aaKnown RBP20.91■□□□□ 0.94
VEGFA-222ENST00000520948 BAATQ14032 418 aaPredicted RBP20.91■□□□□ 0.94
VEGFA-222ENST00000520948 EYSQ5T1H1 3165 aa20.91■□□□□ 0.94
VEGFA-222ENST00000520948 MSL3Q8N5Y2 521 aaKnown RBP20.91■□□□□ 0.94
VEGFA-222ENST00000520948 SAMD3Q8N6K7 520 aa20.91■□□□□ 0.94
VEGFA-222ENST00000520948 MYLIPQ8WY64 445 aa20.91■□□□□ 0.94
VEGFA-222ENST00000520948 FGD4Q96M96 766 aa20.91■□□□□ 0.94
VEGFA-222ENST00000520948 TTYH1Q9H313 450 aaPredicted RBP20.91■□□□□ 0.94
VEGFA-222ENST00000520948 KCNA10Q16322 511 aa20.9■□□□□ 0.94
VEGFA-222ENST00000520948 PFKFB3Q16875 520 aaPredicted RBP20.9■□□□□ 0.94
VEGFA-222ENST00000520948 MAMDC4Q6UXC1 1216 aa20.9■□□□□ 0.94
VEGFA-222ENST00000520948 NSMFQ6X4W1 530 aa20.9■□□□□ 0.94
VEGFA-222ENST00000520948 MCF2L2Q86YR7 1114 aa20.9■□□□□ 0.94
VEGFA-222ENST00000520948 MAP3K20Q9NYL2 800 aaKnown RBP20.9■□□□□ 0.94
VEGFA-222ENST00000520948 hCG_1984214I3L0E3 225 aa20.89■□□□□ 0.93
VEGFA-222ENST00000520948 CPLX1O14810 134 aa20.89■□□□□ 0.93
VEGFA-222ENST00000520948 ADCY6O43306 1168 aa20.89■□□□□ 0.93
VEGFA-222ENST00000520948 HSD17B4P51659 736 aa20.89■□□□□ 0.93
VEGFA-222ENST00000520948 RPS6P62753 249 aaKnown RBP20.89■□□□□ 0.93
VEGFA-222ENST00000520948 CNTN2Q02246 1040 aa20.89■□□□□ 0.93
VEGFA-222ENST00000520948 FPGSQ05932 587 aa20.89■□□□□ 0.93
VEGFA-222ENST00000520948 FAAP100Q0VG06 881 aa20.89■□□□□ 0.93
VEGFA-222ENST00000520948 WWC2Q6AWC2 1192 aa20.89■□□□□ 0.93
VEGFA-222ENST00000520948 TYW1BQ6NUM6 668 aa20.89■□□□□ 0.93
VEGFA-222ENST00000520948 RNF207Q6ZRF8 634 aa20.89■□□□□ 0.93
VEGFA-222ENST00000520948 ZNF713Q8N859 430 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-222ENST00000520948 KLHDC9Q8NEP7 349 aa20.89■□□□□ 0.93
VEGFA-222ENST00000520948 MAFAQ8NHW3 353 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-222ENST00000520948 TSEN34Q9BSV6 310 aaKnown RBP20.89■□□□□ 0.93
VEGFA-222ENST00000520948 SLC26A6Q9BXS9 759 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms