RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 PALMO75781 387 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 CHRNDQ07001 517 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 MEA1Q16626 185 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 TXNRD1Q16881 649 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 SV2BQ7L1I2 683 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 CCDC155Q8N6L0 562 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 GIMAP8Q8ND71 665 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 CNTNAP5Q8WYK1 1306 aa14.17□□□□□ -0.14
TRAPPC9-208ENST00000520857 KIF13AQ9H1H9 1805 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 ECM2O94769 699 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 POLR2FP61218 127 aaKnown RBP14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 PFKFB3Q16875 520 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 PNPLA7Q6ZV29 1317 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 KRT18P05783 430 aaKnown RBP14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 VWA3BQ502W6 1294 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 PNMA1Q8ND90 353 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 DUSP9Q99956 384 aaKnown RBP14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 EPN3Q9H201 632 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 PCDHA4Q9UN74 947 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 FAM205AQ6ZU69 1335 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 C5P01031 1676 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 RAD21O60216 631 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 RHOBTB3O94955 611 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 EVX2Q03828 476 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 TAX1BP1Q86VP1 789 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 NELFCDQ8IXH7 590 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 BANK1Q8NDB2 785 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 PIGBQ92521 554 aa14.16□□□□□ -0.14
TRAPPC9-208ENST00000520857 GRIN2DO15399 1336 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 ZC3H4Q9UPT8 1303 aaKnown RBP14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 EPHB6O15197 1021 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 EZRP15311 586 aaKnown RBP14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 GBP2P32456 591 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 SFMBT2Q5VUG0 894 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 SPATS2Q86XZ4 545 aaKnown RBP14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 STAG2Q8N3U4 1231 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 TBC1D5Q92609 795 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 N4BP2L2Q92802 583 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 SPAG5Q96R06 1193 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 NIP7Q9Y221 180 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 MYH10P35580 1976 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 ARHGAP23Q9P227 1491 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 CHUKO15111 745 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 KCNB1Q14721 858 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 KRT71Q3SY84 523 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 KCNV1Q6PIU1 500 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 ZNF444Q8N0Y2 327 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 MTMR8Q96EF0 704 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 FAM212AQ96EL1 285 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 TRIM9Q9C026 710 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 KLC4Q9NSK0 619 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 ODF2LQ9ULJ1 636 aa14.15□□□□□ -0.14
TRAPPC9-208ENST00000520857 RPSAP08865 295 aaKnown RBP14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 OR52Z1P0C646 297 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 KLHL30Q0D2K2 578 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 ATP6V1G3Q96LB4 118 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 MTA3Q9BTC8 594 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 LSM14BQ9BX40 385 aaKnown RBP14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 AP1M1Q9BXS5 423 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 ADAMTS1Q9UHI8 967 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 PLAGL2Q9UPG8 496 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 TSPY3P0CV98 308 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 TSPY8P0CW00 308 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 RPS6KA1Q15418 735 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 MAN2A1Q16706 1144 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 NAALADL2Q58DX5 795 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 GOLPH3Q9H4A6 298 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 BAIAP2L1Q9UHR4 511 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 TMOD1P28289 359 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 MDH1P40925 334 aaKnown RBP14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 FUT2Q10981 343 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 TRADDQ15628 312 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 PTGISQ16647 500 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 TCERG1LQ5VWI1 586 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 MSL1Q68DK7 614 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 DDX42Q86XP3 938 aaKnown RBP eCLIP14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 DZIP1Q86YF9 867 aaKnown RBP14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 MYCBPAPQ8TBZ2 947 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 SH3GL2Q99962 352 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 SELENOSQ9BQE4 189 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 DPH5Q9H2P9 285 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 SEC63Q9UGP8 760 aaKnown RBP14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 TSKSQ9UJT2 592 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 NWD2Q9ULI1 1742 aa14.14□□□□□ -0.15
TRAPPC9-208ENST00000520857 NEDD9Q14511 834 aa14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 NAA25Q14CX7 972 aa14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 TBC1D31Q96DN5 1066 aa14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 TLR10Q9BXR5 811 aa14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 TFCP2L1Q9NZI6 479 aa14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 NOVA2Q9UNW9 492 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 ZNF233A6NK53 670 aa14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 NKRFO15226 690 aaKnown RBP eCLIP14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 FGFR2P21802 821 aa14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 CLNS1AP54105 237 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 TMEM266Q2M3C6 531 aa14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 SWT1Q5T5J6 900 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 SUSD4Q5VX71 490 aa14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 PNMA8AQ86V59 439 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 CACNA2D3Q8IZS8 1091 aa14.13□□□□□ -0.15
TRAPPC9-208ENST00000520857 BMP2KQ9NSY1 1161 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms