RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 WHAMMP3Q1A5X7 153 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 PRPF40BQ6NWY9 871 aaKnown RBP9.66□□□□□ -0.86
SHPRH-208ENST00000520752 CACTIN-AS1Q8N1I8 211 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 SVOPQ8N4V2 548 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 TBC1D5Q92609 795 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 JAKMIP2Q96AA8 810 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 TCF12Q99081 682 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 POP1Q99575 1024 aaKnown RBP9.66□□□□□ -0.86
SHPRH-208ENST00000520752 BCO2Q9BYV7 579 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 OSBPL7Q9BZF2 842 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 EBF2Q9HAK2 575 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 ABCB6Q9NP58 842 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 SLC40A1Q9NP59 571 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 RNF19AQ9NV58 838 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 CDC23Q9UJX2 597 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 WDR37Q9Y2I8 494 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 AK5Q9Y6K8 562 aa9.66□□□□□ -0.86
SHPRH-208ENST00000520752 SPDYE3A6NKU9 549 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 MYO1FO00160 1098 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 KIF3BO15066 747 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 TRPA1O75762 1119 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 ECEL1O95672 775 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 SYF2O95926 243 aaKnown RBP9.65□□□□□ -0.86
SHPRH-208ENST00000520752 PENKP01210 267 aaPredicted RBP9.65□□□□□ -0.86
SHPRH-208ENST00000520752 CNGA1P29973 690 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 GRIK5Q16478 980 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 EMC10Q5UCC4 262 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 NUGGCQ68CJ6 796 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 ARMCX5Q6P1M9 558 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 CYB5D1Q6P9G0 228 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 RPAP2Q8IXW5 612 aaPredicted RBP9.65□□□□□ -0.86
SHPRH-208ENST00000520752 GLIS3Q8NEA6 775 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 RBM17Q96I25 401 aaKnown RBP9.65□□□□□ -0.86
SHPRH-208ENST00000520752 RBM41Q96IZ5 413 aaKnown RBP9.65□□□□□ -0.86
SHPRH-208ENST00000520752 SH3GL2Q99962 352 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 GORASP1Q9BQQ3 440 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 TSGA10Q9BZW7 698 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 ANKZF1Q9H8Y5 726 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 LIN7BQ9HAP6 207 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 PAPOLBQ9NRJ5 636 aaKnown RBP9.65□□□□□ -0.86
SHPRH-208ENST00000520752 DACT1Q9NYF0 836 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 GMEB1Q9Y692 573 aa9.65□□□□□ -0.86
SHPRH-208ENST00000520752 NRXN1Q9ULB1 1477 aa9.65□□□□□ -0.87
SHPRH-208ENST00000520752 TRAPPC8Q9Y2L5 1435 aa9.65□□□□□ -0.87
SHPRH-208ENST00000520752 HECW2Q9P2P5 1572 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 TARSL2A2RTX5 802 aaKnown RBP9.64□□□□□ -0.87
SHPRH-208ENST00000520752 M0R082 166 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 CREB3O43889 395 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 LILRB5O75023 590 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 E2F6O75461 281 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 MYL1P05976 194 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 PYGLP06737 847 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 EPB41P11171 864 aaKnown RBP9.64□□□□□ -0.87
SHPRH-208ENST00000520752 HOXB4P17483 251 aaPredicted RBP9.64□□□□□ -0.87
SHPRH-208ENST00000520752 AMPD1P23109 780 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 GNG11P61952 73 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 BLMHQ13867 455 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 SLC4A8Q2Y0W8 1093 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 CCDC181Q5TID7 509 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 CCDC80Q76M96 950 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 CEP57Q86XR8 500 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 SMARCC2Q8TAQ2 1214 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 ZNF417Q8TAU3 575 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 NUDT8Q8WV74 236 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 ACSBG1Q96GR2 724 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 CLIC6Q96NY7 704 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 HHIPQ96QV1 700 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 ZNF587Q96SQ5 575 aaPredicted RBP9.64□□□□□ -0.87
SHPRH-208ENST00000520752 TSC22D3Q99576 134 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 LRRCC1Q9C099 1032 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 JPH1Q9HDC5 661 aaPredicted RBP9.64□□□□□ -0.87
SHPRH-208ENST00000520752 ABCF2Q9UG63 623 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 CDK13Q14004 1512 aaKnown RBP9.64□□□□□ -0.87
SHPRH-208ENST00000520752 USP32Q8NFA0 1604 aa9.64□□□□□ -0.87
SHPRH-208ENST00000520752 ENO4A6NNW6 628 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 B4DLN1 442 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 NDUFAB1O14561 156 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 N4BP1O75113 896 aaKnown RBP9.63□□□□□ -0.87
SHPRH-208ENST00000520752 RNF8O76064 485 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 VIMP08670 466 aaKnown RBP9.63□□□□□ -0.87
SHPRH-208ENST00000520752 GHRP10912 638 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 RANBP1P43487 201 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 PSMD7P51665 324 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 AFF1P51825 1210 aaKnown RBP9.63□□□□□ -0.87
SHPRH-208ENST00000520752 EXOSC9Q06265 439 aaKnown RBP9.63□□□□□ -0.87
SHPRH-208ENST00000520752 XRCC4Q13426 336 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 STIM1Q13586 685 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 SNX1Q13596 522 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 LACTB2Q53H82 288 aaPredicted RBP9.63□□□□□ -0.87
SHPRH-208ENST00000520752 ATL3Q6DD88 541 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 NXPE4Q6UWF7 544 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 BZW1Q7L1Q6 419 aaKnown RBP9.63□□□□□ -0.87
SHPRH-208ENST00000520752 TTC6Q86TZ1 520 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 CCDC13Q8IYE1 715 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 FUKQ8N0W3 1084 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 IGSF22Q8N9C0 903 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 ZSCAN1Q8NBB4 408 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 C1orf131Q8NDD1 294 aaKnown RBP9.63□□□□□ -0.87
SHPRH-208ENST00000520752 NEDD1Q8NHV4 660 aa9.63□□□□□ -0.87
SHPRH-208ENST00000520752 RPGRIP1Q96KN7 1286 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms