RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 P3H4Q92791 437 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 RMI1Q9H9A7 625 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 ETAA1Q9NY74 926 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 SCINQ9Y6U3 715 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 TTC4O95801 387 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 P4HA1P13674 534 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 RAP1GDS1P52306 607 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 GNPTABQ3T906 1256 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 FBXO11Q86XK2 927 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 MCF2L2Q86YR7 1114 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 DEPTORQ8TB45 409 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 SYMPKQ92797 1274 aaKnown RBP13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 TEKT3Q9BXF9 490 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 XDHP47989 1333 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 LOC102724428A0A0B4J2F2 783 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 TCP10L2B9ZVM9 353 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 PPEF1O14829 653 aaPredicted RBP13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 IL6STP40189 918 aaPredicted RBP13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 SCNN1DP51172 638 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 NDUFA8P51970 172 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 SIK1P57059 783 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 DOK7Q18PE1 504 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 MFSD4BQ5TF39 518 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 FNBP4Q8N3X1 1017 aaPredicted RBP13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 LRGUKQ96M69 825 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 M0QZ92 97 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 CYP2J2P51589 502 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 NXNQ6DKJ4 435 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 U2AF1L4Q8WU68 220 aaKnown RBP13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 TCP11Q8WWU5 503 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 CCDC124Q96CT7 223 aaKnown RBP13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 PCDHA12Q9UN75 941 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 CHD1O14646 1710 aa13.18□□□□□ -0.3
ERGIC1-208ENST00000520399 RASSF10A6NK89 507 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 N4BP1O75113 896 aaKnown RBP13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 SKIP12755 728 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 LRMPQ12912 555 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 NBPF10Q6P3W6 841 aaKnown RBP13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 CLIC6Q96NY7 704 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 NLRC4Q9NPP4 1024 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 AMFRQ9UKV5 643 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 CARMIL3Q8ND23 1372 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 PPP6R2O75170 966 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 TNNI1P19237 187 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 MX2P20592 715 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 APBA1Q02410 837 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 MAGEF1Q9HAY2 307 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 RTEL1Q9NZ71 1219 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 PARP2Q9UGN5 583 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 IQGAP3Q86VI3 1631 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 H7C1D1 291 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 VPS41P49754 854 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 LONRF2Q1L5Z9 754 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 CCDC105Q8IYK2 499 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 ORC6Q9Y5N6 252 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 TESPA1A2RU30 521 aaPredicted RBP13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 ARHGAP42A6NI28 874 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 PYGLP06737 847 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 PNMA6AP0CW24 399 aaPredicted RBP13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 ICA1Q05084 483 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 LEMD3Q9Y2U8 911 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 K7ENM7 598 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 CDC25BP30305 580 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 OR8K1Q8NGG5 319 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 PSMB7Q99436 277 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 TEKT2Q9UIF3 430 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 STK38LQ9Y2H1 464 aa13.17□□□□□ -0.3
ERGIC1-208ENST00000520399 LAD1O00515 517 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 IL1RL1Q01638 556 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 SEPT2Q15019 361 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 ADCK5Q3MIX3 580 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 FOXP1Q9H334 677 aaPredicted RBP13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 PALMDQ9NP74 551 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 SCHIP1Q9P0W5 487 aaPredicted RBP13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 ITGB1BP2Q9UKP3 347 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 A0A1W2PQ27 194 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 A0A1W2PQ64 194 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 A0A1W2PQD8 194 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 DYTNA2CJ06 578 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 BTBD18B2RXH4 712 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 KRT15P19012 456 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 PKP1Q13835 747 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 RAB17Q9H0T7 212 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 PCDHA4Q9UN74 947 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 SAR1BQ9Y6B6 198 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 ZNF521Q96K83 1311 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 ANKRD20A4Q4UJ75 823 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 ANKRD20A8PQ5CZ79 823 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 ANKRD20A2Q5SQ80 823 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 ANKRD20A1Q5TYW2 823 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 SPATA1Q5VX52 437 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 RDH13Q8NBN7 331 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 PNMA2Q9UL42 364 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 CD19P15391 556 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 ADD2P35612 726 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 UNC5CLQ8IV45 518 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 GINS2Q9Y248 185 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms