RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 BTBD18B2RXH4 712 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 KLRF2D3W0D1 207 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 RAD21O60216 631 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 CYP2C8P10632 490 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 HSPA8P11142 646 aaKnown RBP8.25□□□□□ -1.09
MRPS28-205ENST00000519386 PDHBP11177 359 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 LIG1P18858 919 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 PRSS12P56730 875 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 CCDC173Q0VFZ6 552 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 CRHR2Q13324 411 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 AXDND1Q5T1B0 1012 aaPredicted RBP8.25□□□□□ -1.09
MRPS28-205ENST00000519386 FMR1NBQ8N0W7 255 aaPredicted RBP8.25□□□□□ -1.09
MRPS28-205ENST00000519386 KRI1Q8N9T8 703 aaKnown RBP8.25□□□□□ -1.09
MRPS28-205ENST00000519386 GMCL1P1Q8NEA9 526 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 DCAF4Q8WV16 495 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 FERMT2Q96AC1 680 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 RRP36Q96EU6 259 aaKnown RBP8.25□□□□□ -1.09
MRPS28-205ENST00000519386 ASCC2Q9H1I8 757 aaPredicted RBP8.25□□□□□ -1.09
MRPS28-205ENST00000519386 RPAP3Q9H6T3 665 aaPredicted RBP8.25□□□□□ -1.09
MRPS28-205ENST00000519386 RIOX1Q9H6W3 641 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 SH2D4AQ9H788 454 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 GOPCQ9HD26 462 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 GJB4Q9NTQ9 266 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 BARHL2Q9NY43 387 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 SEC63Q9UGP8 760 aaKnown RBP8.25□□□□□ -1.09
MRPS28-205ENST00000519386 SLC45A1Q9Y2W3 748 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 CLIC4Q9Y696 253 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 ADGRA2Q96PE1 1338 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 LOXHD1Q8IVV2 1947 aa8.25□□□□□ -1.09
MRPS28-205ENST00000519386 F5H6K3 240 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 M0R2N6 131 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 LAD1O00515 517 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 PPFIA3O75145 1194 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 NR1I2O75469 434 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 NDUFB10O96000 172 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 GNA11P29992 359 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 HOXA7P31268 230 aaPredicted RBP8.24□□□□□ -1.09
MRPS28-205ENST00000519386 CTCFP49711 727 aaPredicted RBP8.24□□□□□ -1.09
MRPS28-205ENST00000519386 LBX1P52954 281 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 IRX3P78415 501 aaPredicted RBP8.24□□□□□ -1.09
MRPS28-205ENST00000519386 KLRC3Q07444 240 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 ZNF543Q08ER8 600 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 PABPC4Q13310 644 aaKnown RBP eCLIP8.24□□□□□ -1.095e-6■□□□□ 10.8
MRPS28-205ENST00000519386 SNW1Q13573 536 aaKnown RBP8.24□□□□□ -1.09
MRPS28-205ENST00000519386 RESP18Q5W5W9 173 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 ARL6IP4Q66PJ3 421 aaKnown RBP8.24□□□□□ -1.09
MRPS28-205ENST00000519386 LAPTM4BQ86VI4 370 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 CCAR1Q8IX12 1150 aaKnown RBP8.24□□□□□ -1.09
MRPS28-205ENST00000519386 FSIP1Q8NA03 581 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 LPAR1Q92633 364 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 PARK7Q99497 189 aaKnown RBP8.24□□□□□ -1.09
MRPS28-205ENST00000519386 NUP88Q99567 741 aaPredicted RBP8.24□□□□□ -1.09
MRPS28-205ENST00000519386 PYM1Q9BRP8 204 aaKnown RBP8.24□□□□□ -1.09
MRPS28-205ENST00000519386 CFHR5Q9BXR6 569 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 FTOQ9C0B1 505 aaKnown RBP eCLIP8.24□□□□□ -1.09
MRPS28-205ENST00000519386 TANGO6Q9C0B7 1094 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 ZMYND12Q9H0C1 365 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 GLT8D2Q9H1C3 349 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 ZFYVE28Q9HCC9 887 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 VPS54Q9P1Q0 977 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 HCSTQ9UBK5 93 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 PCDHA4Q9UN74 947 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 HPSEQ9Y251 543 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 RLFQ13129 1914 aa8.24□□□□□ -1.09
MRPS28-205ENST00000519386 USP17L15C9J2P7 530 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 USP17L13C9JLJ4 530 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 USP17L11C9JVI0 530 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 USP17L18D6R9N7 530 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 USP17L22D6RA61 530 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 USP17L17D6RBQ6 530 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 USP17L19D6RCP7 530 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 USP17L20D6RJB6 530 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 STXBP3O00186 592 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 WDR46O15213 610 aaKnown RBP8.23□□□□□ -1.09
MRPS28-205ENST00000519386 CYTH3O43739 400 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 TLR2O60603 784 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 TOB1P50616 345 aaPredicted RBP8.23□□□□□ -1.09
MRPS28-205ENST00000519386 NLRP5P59047 1200 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 USP17L24Q0WX57 530 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 FAM83BQ5T0W9 1011 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 MCTP2Q6DN12 878 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 CATSPERGQ6ZRH7 1159 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 RASGRP2Q7LDG7 609 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 BLIDQ8IZY5 108 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 CMTR1Q8N1G2 835 aaKnown RBP8.23□□□□□ -1.09
MRPS28-205ENST00000519386 STAG2Q8N3U4 1231 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 CCDC82Q8N4S0 544 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 FAM200AQ8TCP9 573 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 SHISA4Q96DD7 197 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 MTMR8Q96EF0 704 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 CCDC34Q96HJ3 373 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 GMCL1Q96IK5 515 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 PDLIM2Q96JY6 352 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 PPP1R9BQ96SB3 815 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 P2RX7Q99572 595 aaKnown RBP8.23□□□□□ -1.09
MRPS28-205ENST00000519386 SEPT9Q9UHD8 586 aaPredicted RBP8.23□□□□□ -1.09
MRPS28-205ENST00000519386 CPA4Q9UI42 421 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 PNMA3Q9UL41 463 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 KCNJ14Q9UNX9 436 aa8.23□□□□□ -1.09
MRPS28-205ENST00000519386 MTMR7Q9Y216 660 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms