RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 AMNQ9BXJ7 453 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 ZSCAN16Q9H4T2 348 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-206ENST00000519115 ZHX1Q9UKY1 873 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-206ENST00000519115 PNMA2Q9UL42 364 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 CNPY2Q9Y2B0 182 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 ABCB11O95342 1321 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 SYNGAP1Q96PV0 1343 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 STK36Q9NRP7 1315 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 CEP290O15078 2479 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 MYH7BA7E2Y1 1941 aa8.74□□□□□ -1.01
SDCBP-206ENST00000519115 DOCK5Q9H7D0 1870 aa8.73□□□□□ -1.01
SDCBP-206ENST00000519115 CPLX1O14810 134 aa8.73□□□□□ -1.01
SDCBP-206ENST00000519115 OPLAHO14841 1288 aa8.73□□□□□ -1.01
SDCBP-206ENST00000519115 SEPT4O43236 478 aa8.73□□□□□ -1.01
SDCBP-206ENST00000519115 STX6O43752 255 aa8.73□□□□□ -1.01
SDCBP-206ENST00000519115 MNX1P50219 401 aaPredicted RBP8.73□□□□□ -1.01
SDCBP-206ENST00000519115 METAP2P50579 478 aaKnown RBP eCLIP8.73□□□□□ -1.01
SDCBP-206ENST00000519115 RPS6P62753 249 aaKnown RBP8.73□□□□□ -1.01
SDCBP-206ENST00000519115 SCRN1Q12765 414 aa8.73□□□□□ -1.01
SDCBP-206ENST00000519115 RTN1Q16799 776 aa8.73□□□□□ -1.01
SDCBP-206ENST00000519115 LARP1BQ659C4 914 aaKnown RBP8.73□□□□□ -1.01
SDCBP-206ENST00000519115 LHX8Q68G74 356 aa8.73□□□□□ -1.01
SDCBP-206ENST00000519115 MAMDC4Q6UXC1 1216 aa8.73□□□□□ -1.01
SDCBP-206ENST00000519115 TMTC3Q6ZXV5 915 aa8.73□□□□□ -1.01
SDCBP-206ENST00000519115 ZNF467Q7Z7K2 595 aaPredicted RBP8.73□□□□□ -1.01
SDCBP-206ENST00000519115 RRP36Q96EU6 259 aaKnown RBP8.73□□□□□ -1.01
SDCBP-206ENST00000519115 LARP6Q9BRS8 491 aaKnown RBP8.73□□□□□ -1.01
SDCBP-206ENST00000519115 ANP32EQ9BTT0 268 aa8.73□□□□□ -1.01
SDCBP-206ENST00000519115 CRISPLD2Q9H0B8 497 aa8.73□□□□□ -1.01
SDCBP-206ENST00000519115 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.73□□□□□ -1.01
SDCBP-206ENST00000519115 DDX20Q9UHI6 824 aaKnown RBP8.73□□□□□ -1.01
SDCBP-206ENST00000519115 MRPL11Q9Y3B7 192 aaKnown RBP8.73□□□□□ -1.01
SDCBP-206ENST00000519115 PCDHA1Q9Y5I3 950 aa8.73□□□□□ -1.01
SDCBP-206ENST00000519115 CNTNAP5Q8WYK1 1306 aa8.73□□□□□ -1.01
SDCBP-206ENST00000519115 PNMA6FA0A0J9YX94 578 aa8.72□□□□□ -1.01
SDCBP-206ENST00000519115 CFBP00751 764 aa8.72□□□□□ -1.01
SDCBP-206ENST00000519115 ZNF865P0CJ78 1059 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-206ENST00000519115 SYT1P21579 422 aa8.72□□□□□ -1.01
SDCBP-206ENST00000519115 GJB2P29033 226 aa8.72□□□□□ -1.01
SDCBP-206ENST00000519115 CDC27P30260 824 aa8.72□□□□□ -1.01
SDCBP-206ENST00000519115 HOXA13P31271 388 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-206ENST00000519115 ALDH5A1P51649 535 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-206ENST00000519115 NTRK3Q16288 839 aa8.72□□□□□ -1.01
SDCBP-206ENST00000519115 EEPD1Q7L9B9 569 aa8.72□□□□□ -1.01
SDCBP-206ENST00000519115 CCDC83Q8IWF9 413 aa8.72□□□□□ -1.01
SDCBP-206ENST00000519115 FBXO16Q8IX29 292 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-206ENST00000519115 MSL3Q8N5Y2 521 aaKnown RBP8.72□□□□□ -1.01
SDCBP-206ENST00000519115 NSUN7Q8NE18 718 aaKnown RBP8.72□□□□□ -1.01
SDCBP-206ENST00000519115 RNF26Q9BY78 433 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-206ENST00000519115 COL20A1Q9P218 1284 aa8.72□□□□□ -1.01
SDCBP-206ENST00000519115 ADD3Q9UEY8 706 aaKnown RBP8.72□□□□□ -1.01
SDCBP-206ENST00000519115 SEC63Q9UGP8 760 aaKnown RBP8.72□□□□□ -1.01
SDCBP-206ENST00000519115 OGDHLQ9ULD0 1010 aa8.72□□□□□ -1.01
SDCBP-206ENST00000519115 ASB14A6NK59 587 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 GOLGA6L22H0YM25 854 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 ADCY6O43306 1168 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 PRPF3O43395 683 aaKnown RBP8.71□□□□□ -1.02
SDCBP-206ENST00000519115 MSCO60682 206 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 PPFIA3O75145 1194 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 ZSCAN22P10073 491 aaPredicted RBP8.71□□□□□ -1.02
SDCBP-206ENST00000519115 AKR1A1P14550 325 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 PTGS1P23219 599 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 ACVR2BQ13705 512 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 CSPP1Q1MSJ5 1256 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 SKOR2Q2VWA4 1001 aaPredicted RBP8.71□□□□□ -1.02
SDCBP-206ENST00000519115 CCDC144BQ3MJ40 725 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 NOL8Q76FK4 1167 aaKnown RBP8.71□□□□□ -1.02
SDCBP-206ENST00000519115 UBE2Q1Q7Z7E8 422 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 MCF2L2Q86YR7 1114 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 TRIM22Q8IYM9 498 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 FAM184AQ8NB25 1140 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 SYTL5Q8TDW5 730 aaPredicted RBP8.71□□□□□ -1.02
SDCBP-206ENST00000519115 GPKOWQ92917 476 aaPredicted RBP eCLIP8.71□□□□□ -1.021e-6■□□□□ 11.3
SDCBP-206ENST00000519115 PAWRQ96IZ0 340 aaKnown RBP8.71□□□□□ -1.02
SDCBP-206ENST00000519115 TAAR1Q96RJ0 339 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 KATNBL1Q9H079 304 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 ABHD16BQ9H3Z7 469 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 NCOA5Q9HCD5 579 aaKnown RBP8.71□□□□□ -1.02
SDCBP-206ENST00000519115 FAM217BQ9NTX9 383 aaPredicted RBP8.71□□□□□ -1.02
SDCBP-206ENST00000519115 NRBP1Q9UHY1 535 aa8.71□□□□□ -1.02
SDCBP-206ENST00000519115 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.7□□□□□ -1.02
SDCBP-206ENST00000519115 hCG_1984214I3L0E3 225 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 DEXIO95424 95 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 LARGE1O95461 756 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 CTDNEP1O95476 244 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 PGK1P00558 417 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 RARBP10826 455 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 XBP1P17861 261 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 EIF2AK2P19525 551 aaKnown RBP8.7□□□□□ -1.02
SDCBP-206ENST00000519115 ADD1P35611 737 aaKnown RBP8.7□□□□□ -1.02
SDCBP-206ENST00000519115 HSD17B4P51659 736 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 CCT2P78371 535 aaKnown RBP8.7□□□□□ -1.02
SDCBP-206ENST00000519115 PDE4DQ08499 809 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 SSRP1Q08945 709 aaKnown RBP8.7□□□□□ -1.02
SDCBP-206ENST00000519115 FUT2Q10981 343 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 ST3GAL1Q11201 340 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 GJC2Q5T442 439 aaPredicted RBP8.7□□□□□ -1.02
SDCBP-206ENST00000519115 GALNT17Q6IS24 598 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 HEATR3Q7Z4Q2 680 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 FCHSD1Q86WN1 690 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 1452.2 ms