RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 PPP1R18Q6NYC8 613 aa25.33■■□□□ 1.65
VEGFA-217ENST00000518538 CUL5Q93034 780 aa25.33■■□□□ 1.65
VEGFA-217ENST00000518538 KIF2CQ99661 725 aa25.33■■□□□ 1.65
VEGFA-217ENST00000518538 RNF26Q9BY78 433 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-217ENST00000518538 PSTPIP2Q9H939 334 aa25.33■■□□□ 1.65
VEGFA-217ENST00000518538 XPNPEP3Q9NQH7 507 aa25.33■■□□□ 1.65
VEGFA-217ENST00000518538 DUSP11O75319 330 aaKnown RBP25.32■■□□□ 1.64
VEGFA-217ENST00000518538 EIF2AK2P19525 551 aaKnown RBP25.32■■□□□ 1.64
VEGFA-217ENST00000518538 FCHSD1Q86WN1 690 aa25.32■■□□□ 1.64
VEGFA-217ENST00000518538 ARRDC4Q8NCT1 418 aa25.32■■□□□ 1.64
VEGFA-217ENST00000518538 DIS3LQ8TF46 1054 aaKnown RBP25.32■■□□□ 1.64
VEGFA-217ENST00000518538 PHKBQ93100 1093 aa25.32■■□□□ 1.64
VEGFA-217ENST00000518538 LENG1Q96BZ8 264 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-217ENST00000518538 SLKQ9H2G2 1235 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-217ENST00000518538 BARHL2Q9NY43 387 aa25.32■■□□□ 1.64
VEGFA-217ENST00000518538 STXBP3O00186 592 aa25.31■■□□□ 1.64
VEGFA-217ENST00000518538 DNM1LO00429 736 aa25.31■■□□□ 1.64
VEGFA-217ENST00000518538 MEIS2O14770 477 aa25.31■■□□□ 1.64
VEGFA-217ENST00000518538 CPLX1O14810 134 aa25.31■■□□□ 1.64
VEGFA-217ENST00000518538 ADCY6O43306 1168 aa25.31■■□□□ 1.64
VEGFA-217ENST00000518538 SCG2P13521 617 aa25.31■■□□□ 1.64
VEGFA-217ENST00000518538 ADCYAP1R1P41586 468 aa25.31■■□□□ 1.64
VEGFA-217ENST00000518538 NAPAP54920 295 aa25.31■■□□□ 1.64
VEGFA-217ENST00000518538 AKAP17AQ02040 695 aaKnown RBP25.31■■□□□ 1.64
VEGFA-217ENST00000518538 IQSEC1Q6DN90 963 aa25.31■■□□□ 1.64
VEGFA-217ENST00000518538 NECAB2Q7Z6G3 386 aa25.31■■□□□ 1.64
VEGFA-217ENST00000518538 SMARCC2Q8TAQ2 1214 aa25.31■■□□□ 1.64
VEGFA-217ENST00000518538 PAWRQ96IZ0 340 aaKnown RBP25.31■■□□□ 1.64
VEGFA-217ENST00000518538 PDGFCQ9NRA1 345 aa25.31■■□□□ 1.64
VEGFA-217ENST00000518538 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.3■■□□□ 1.64
VEGFA-217ENST00000518538 PFKFB2O60825 505 aa25.3■■□□□ 1.64
VEGFA-217ENST00000518538 NR3C2P08235 984 aa25.3■■□□□ 1.64
VEGFA-217ENST00000518538 TNFAIP2Q03169 654 aa25.3■■□□□ 1.64
VEGFA-217ENST00000518538 STXBP2Q15833 593 aa25.3■■□□□ 1.64
VEGFA-217ENST00000518538 PKN1Q16512 942 aa25.3■■□□□ 1.64
VEGFA-217ENST00000518538 TYW1BQ6NUM6 668 aa25.3■■□□□ 1.64
VEGFA-217ENST00000518538 CPLX2Q6PUV4 134 aaKnown RBP25.3■■□□□ 1.64
VEGFA-217ENST00000518538 USP17L6PQ6QN14 398 aa25.3■■□□□ 1.64
VEGFA-217ENST00000518538 TEX2Q8IWB9 1127 aa25.3■■□□□ 1.64
VEGFA-217ENST00000518538 PDCD2LQ9BRP1 358 aa25.3■■□□□ 1.64
VEGFA-217ENST00000518538 SLC26A6Q9BXS9 759 aa25.3■■□□□ 1.64
VEGFA-217ENST00000518538 RBM47A0AV96 593 aaKnown RBP25.29■■□□□ 1.64
VEGFA-217ENST00000518538 PGK1P00558 417 aa25.29■■□□□ 1.64
VEGFA-217ENST00000518538 SCRN1Q12765 414 aa25.29■■□□□ 1.64
VEGFA-217ENST00000518538 LRRC41Q15345 812 aa25.29■■□□□ 1.64
VEGFA-217ENST00000518538 C11orf49Q9H6J7 331 aa25.29■■□□□ 1.64
VEGFA-217ENST00000518538 FRMPD4Q14CM0 1322 aa25.29■■□□□ 1.64
VEGFA-217ENST00000518538 SYNRGQ9UMZ2 1314 aa25.29■■□□□ 1.64
VEGFA-217ENST00000518538 ADAMTS4O75173 837 aa25.28■■□□□ 1.64
VEGFA-217ENST00000518538 SMPD1P17405 629 aa25.28■■□□□ 1.64
VEGFA-217ENST00000518538 PGM5Q15124 567 aa25.28■■□□□ 1.64
VEGFA-217ENST00000518538 GJC2Q5T442 439 aaPredicted RBP25.28■■□□□ 1.64
VEGFA-217ENST00000518538 NOL8Q76FK4 1167 aaKnown RBP25.28■■□□□ 1.64
VEGFA-217ENST00000518538 RNF180Q86T96 592 aa25.28■■□□□ 1.64
VEGFA-217ENST00000518538 TRIM22Q8IYM9 498 aa25.28■■□□□ 1.64
VEGFA-217ENST00000518538 GNEQ9Y223 722 aaKnown RBP25.28■■□□□ 1.64
VEGFA-217ENST00000518538 KBTBD13C9JR72 458 aa25.27■■□□□ 1.64
VEGFA-217ENST00000518538 PPFIA3O75145 1194 aa25.27■■□□□ 1.64
VEGFA-217ENST00000518538 COL6A1P12109 1028 aa25.27■■□□□ 1.64
VEGFA-217ENST00000518538 SSRP1Q08945 709 aaKnown RBP25.27■■□□□ 1.64
VEGFA-217ENST00000518538 SCFD2Q8WU76 684 aa25.27■■□□□ 1.64
VEGFA-217ENST00000518538 WDR11Q9BZH6 1224 aa25.27■■□□□ 1.64
VEGFA-217ENST00000518538 UPF3AQ9H1J1 476 aaKnown RBP25.27■■□□□ 1.64
VEGFA-217ENST00000518538 RIC8AQ9NPQ8 531 aa25.27■■□□□ 1.64
VEGFA-217ENST00000518538 EIF3JO75822 258 aaKnown RBP25.26■■□□□ 1.63
VEGFA-217ENST00000518538 CDKL5O76039 1030 aa25.26■■□□□ 1.63
VEGFA-217ENST00000518538 MYCNP04198 464 aaPredicted RBP25.26■■□□□ 1.63
VEGFA-217ENST00000518538 ADCY7P51828 1080 aa25.26■■□□□ 1.63
VEGFA-217ENST00000518538 GJA9P57773 515 aa25.26■■□□□ 1.63
VEGFA-217ENST00000518538 UBE2SQ16763 222 aa25.26■■□□□ 1.63
VEGFA-217ENST00000518538 ME3Q16798 604 aa25.26■■□□□ 1.63
VEGFA-217ENST00000518538 DUSP28Q4G0W2 176 aa25.26■■□□□ 1.63
VEGFA-217ENST00000518538 VSIG10LQ86VR7 867 aa25.26■■□□□ 1.63
VEGFA-217ENST00000518538 IL31RAQ8NI17 732 aa25.26■■□□□ 1.63
VEGFA-217ENST00000518538 CCDC12Q8WUD4 166 aaPredicted RBP25.26■■□□□ 1.63
VEGFA-217ENST00000518538 BACH2Q9BYV9 841 aa25.26■■□□□ 1.63
VEGFA-217ENST00000518538 GLT8D2Q9H1C3 349 aa25.26■■□□□ 1.63
VEGFA-217ENST00000518538 SPC25Q9HBM1 224 aa25.26■■□□□ 1.63
VEGFA-217ENST00000518538 Q9Y3F1 56 aa25.26■■□□□ 1.63
VEGFA-217ENST00000518538 ESYT2A0FGR8 921 aa25.25■■□□□ 1.63
VEGFA-217ENST00000518538 SMCO2A6NFE2 343 aa25.25■■□□□ 1.63
VEGFA-217ENST00000518538 MYCLP12524 364 aaPredicted RBP25.25■■□□□ 1.63
VEGFA-217ENST00000518538 CCND2P30279 289 aa25.25■■□□□ 1.63
VEGFA-217ENST00000518538 NKX3-2P78367 333 aa25.25■■□□□ 1.63
VEGFA-217ENST00000518538 TLK2Q86UE8 772 aa25.25■■□□□ 1.63
VEGFA-217ENST00000518538 KLHDC9Q8NEP7 349 aa25.25■■□□□ 1.63
VEGFA-217ENST00000518538 TBC1D32Q96NH3 1257 aa25.25■■□□□ 1.63
VEGFA-217ENST00000518538 HTATIP2Q9BUP3 242 aa25.25■■□□□ 1.63
VEGFA-217ENST00000518538 NKRFO15226 690 aaKnown RBP eCLIP25.24■■□□□ 1.631e-7■□□□□ 10.5
VEGFA-217ENST00000518538 DEXIO95424 95 aa25.24■■□□□ 1.63
VEGFA-217ENST00000518538 LARGE1O95461 756 aa25.24■■□□□ 1.63
VEGFA-217ENST00000518538 C6orf222P0C671 652 aaPredicted RBP25.24■■□□□ 1.63
VEGFA-217ENST00000518538 CST5P28325 142 aaPredicted RBP25.24■■□□□ 1.63
VEGFA-217ENST00000518538 TTLL4Q14679 1199 aa25.24■■□□□ 1.63
VEGFA-217ENST00000518538 RABEP1Q15276 862 aa25.24■■□□□ 1.63
VEGFA-217ENST00000518538 SEPT14Q6ZU15 432 aa25.24■■□□□ 1.63
VEGFA-217ENST00000518538 GTF3C6Q969F1 213 aa25.24■■□□□ 1.63
VEGFA-217ENST00000518538 ZMYND12Q9H0C1 365 aa25.24■■□□□ 1.63
VEGFA-217ENST00000518538 SPDYE3A6NKU9 549 aa25.23■■□□□ 1.63
VEGFA-217ENST00000518538 TMEM63BQ5T3F8 832 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms