RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 MSX1P28360 303 aa7.23□□□□□ -1.25
MRPS28-203ENST00000518371 GUCY1A2P33402 732 aa7.23□□□□□ -1.25
MRPS28-203ENST00000518371 MAP2K3P46734 347 aa7.23□□□□□ -1.25
MRPS28-203ENST00000518371 ZNF589Q86UQ0 364 aaPredicted RBP7.23□□□□□ -1.25
MRPS28-203ENST00000518371 CD99L2Q8TCZ2 262 aa7.23□□□□□ -1.25
MRPS28-203ENST00000518371 MCOLN1Q9GZU1 580 aa7.23□□□□□ -1.25
MRPS28-203ENST00000518371 KIAA1683Q9H0B3 1180 aa7.23□□□□□ -1.25
MRPS28-203ENST00000518371 SH2D4AQ9H788 454 aa7.23□□□□□ -1.25
MRPS28-203ENST00000518371 KANSL2Q9H9L4 492 aa7.23□□□□□ -1.25
MRPS28-203ENST00000518371 EFCC1Q9HA90 598 aa7.23□□□□□ -1.25
MRPS28-203ENST00000518371 TOMM22Q9NS69 142 aa7.23□□□□□ -1.25
MRPS28-203ENST00000518371 TRIM17Q9Y577 477 aa7.23□□□□□ -1.25
MRPS28-203ENST00000518371 USP17L15C9J2P7 530 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 USP17L13C9JLJ4 530 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 USP17L11C9JVI0 530 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 USP17L18D6R9N7 530 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 USP17L22D6RA61 530 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 USP17L17D6RBQ6 530 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 USP17L19D6RCP7 530 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 USP17L20D6RJB6 530 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 ZNF213O14771 459 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 RANBP6O60518 1105 aaKnown RBP7.22□□□□□ -1.25
MRPS28-203ENST00000518371 INHAP05111 366 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 TSPY3P0CV98 308 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 TSPY8P0CW00 308 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 EEF2P13639 858 aaKnown RBP7.22□□□□□ -1.25
MRPS28-203ENST00000518371 CHMLP26374 656 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 HOXD10P28358 340 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 HOXA7P31268 230 aaPredicted RBP7.22□□□□□ -1.25
MRPS28-203ENST00000518371 CHRNA4P43681 627 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 GDF10P55107 478 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 TFAP4Q01664 338 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 ICA1Q05084 483 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 USP17L24Q0WX57 530 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 TLR1Q15399 786 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 PKN2Q16513 984 aaKnown RBP7.22□□□□□ -1.25
MRPS28-203ENST00000518371 FAM47AQ5JRC9 791 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 GNASQ5JWF2 1037 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 ERICH6BQ5W0A0 696 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 C17orf99Q6UX52 265 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 ANKRD13CQ8N6S4 541 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 EDARADDQ8WWZ3 215 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 P2RX7Q99572 595 aaKnown RBP7.22□□□□□ -1.25
MRPS28-203ENST00000518371 ASCC2Q9H1I8 757 aaPredicted RBP7.22□□□□□ -1.25
MRPS28-203ENST00000518371 PPP4R2Q9NY27 417 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 CLIP2Q9UDT6 1046 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 CTNNA3Q9UI47 895 aa7.22□□□□□ -1.25
MRPS28-203ENST00000518371 OTOFQ9HC10 1997 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 A0A1W2PRG0 241 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 TSPY2A6NKD2 308 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 FOXP2O15409 715 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 PSMC4P43686 418 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 GCLCP48506 637 aaPredicted RBP7.21□□□□□ -1.26
MRPS28-203ENST00000518371 HAND2P61296 217 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 LACTBP83111 547 aaPredicted RBP7.21□□□□□ -1.26
MRPS28-203ENST00000518371 RRP12Q5JTH9 1297 aaKnown RBP7.21□□□□□ -1.26
MRPS28-203ENST00000518371 CATSPERGQ6ZRH7 1159 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 MFSD6Q6ZSS7 791 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 OTOP1Q7RTM1 612 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 SKAP1Q86WV1 359 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 CLEC10AQ8IUN9 316 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 SIAH1Q8IUQ4 282 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 CCAR1Q8IX12 1150 aaKnown RBP7.21□□□□□ -1.26
MRPS28-203ENST00000518371 SPICE1Q8N0Z3 855 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 RHBDD1Q8TEB9 315 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 ABHD8Q96I13 439 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 C12orf42Q96LP6 360 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 TANGO6Q9C0B7 1094 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 RPAP3Q9H6T3 665 aaPredicted RBP7.21□□□□□ -1.26
MRPS28-203ENST00000518371 INCENPQ9NQS7 918 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 NYAP2Q9P242 653 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 ANAPC4Q9UJX5 808 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 TMX2Q9Y320 296 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 PCDHGA11Q9Y5H2 935 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 USP3Q9Y6I4 520 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 MYH1P12882 1939 aa7.21□□□□□ -1.26
MRPS28-203ENST00000518371 CCDC85CA6NKD9 419 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 TMEM229AB2RXF0 380 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 HOXB4P17483 251 aaPredicted RBP7.2□□□□□ -1.26
MRPS28-203ENST00000518371 VCAM1P19320 739 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 PLA2G4AP47712 749 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 FCGRTP55899 365 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 HERVK_113P62684 666 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 COG2Q14746 738 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 IMMTQ16891 758 aaKnown RBP7.2□□□□□ -1.26
MRPS28-203ENST00000518371 FOXD4L6Q3SYB3 417 aaPredicted RBP7.2□□□□□ -1.26
MRPS28-203ENST00000518371 AKNAD1Q5T1N1 836 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 FBXO46Q6PJ61 603 aaPredicted RBP7.2□□□□□ -1.26
MRPS28-203ENST00000518371 FOXD4L3Q6VB84 417 aaPredicted RBP7.2□□□□□ -1.26
MRPS28-203ENST00000518371 KIAA1211Q6ZU35 1233 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 GPRC5AQ8NFJ5 357 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 GTF3C2Q8WUA4 911 aaPredicted RBP7.2□□□□□ -1.26
MRPS28-203ENST00000518371 LPAR1Q92633 364 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 PAGR1Q9BTK6 254 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 DSCC1Q9BVC3 393 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 ARHGAP39Q9C0H5 1083 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 RNF41Q9H4P4 317 aaPredicted RBP7.2□□□□□ -1.26
MRPS28-203ENST00000518371 VCPKMTQ9H867 229 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 CWC22Q9HCG8 908 aaKnown RBP7.2□□□□□ -1.26
MRPS28-203ENST00000518371 MTMR4Q9NYA4 1195 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms