RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 ZNF532Q9HCE3 1301 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 RBM8AQ9Y5S9 174 aaKnown RBP8.67□□□□□ -1.02
PVT1-206ENST00000517838 SNX14Q9Y5W7 946 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 REV3LO60673 3130 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 GRIN2DO15399 1336 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 CYP2D7A0A087X1C5 515 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 RFXAPO00287 272 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 CASTP20810 708 aaKnown RBP8.66□□□□□ -1.02
PVT1-206ENST00000517838 COPB2P35606 906 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 CDK8P49336 464 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 CCL23P55773 120 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 NKX3-2P78367 333 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 AAK1Q2M2I8 961 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 LRRFIP1Q32MZ4 808 aaKnown RBP8.66□□□□□ -1.02
PVT1-206ENST00000517838 CCDC144BQ3MJ40 725 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 SLFNL1Q499Z3 407 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 TMX3Q96JJ7 454 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 CCDC17Q96LX7 622 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 NUP88Q99567 741 aaPredicted RBP8.66□□□□□ -1.02
PVT1-206ENST00000517838 TEX13BQ9BXU2 312 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 GZF1Q9H116 711 aaPredicted RBP8.66□□□□□ -1.02
PVT1-206ENST00000517838 TRPV6Q9H1D0 765 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 IL25Q9H293 177 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 ABHD16BQ9H3Z7 469 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 HIPK3Q9H422 1215 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 ARMT1Q9H993 441 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 KANSL2Q9H9L4 492 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 C11orf16Q9NQ32 467 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 MTCH2Q9Y6C9 303 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 NCOR1O75376 2440 aa8.66□□□□□ -1.02
PVT1-206ENST00000517838 ASTN1O14525 1302 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 A0A0D9SFI3 127 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.65□□□□□ -1.02
PVT1-206ENST00000517838 USP17L12C9JPN9 530 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 USP17L21D6R901 530 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 GOLIM4O00461 696 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 ATP2A1O14983 1001 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 TLR3O15455 904 aaKnown RBP8.65□□□□□ -1.02
PVT1-206ENST00000517838 TLL1O43897 1013 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 TRAK2O60296 914 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 ZMYND10O75800 440 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 POU3F3P20264 500 aaPredicted RBP8.65□□□□□ -1.02
PVT1-206ENST00000517838 PSMA5P28066 241 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 DDIT3P35638 169 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 BEX3Q00994 111 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 PTH1RQ03431 593 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 L1TD1Q5T7N2 865 aaKnown RBP8.65□□□□□ -1.02
PVT1-206ENST00000517838 C12orf60Q5U649 245 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 FOXD4L5Q5VV16 416 aaPredicted RBP8.65□□□□□ -1.02
PVT1-206ENST00000517838 PPP2R2DQ66LE6 453 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 SNRNP48Q6IEG0 339 aaKnown RBP8.65□□□□□ -1.02
PVT1-206ENST00000517838 CXCL17Q6UXB2 119 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 C16orf86Q6ZW13 317 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 FOXD4L4Q8WXT5 416 aaPredicted RBP8.65□□□□□ -1.02
PVT1-206ENST00000517838 HAUS7Q99871 368 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 SLF1Q9BQI6 1058 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 NOC4LQ9BVI4 516 aaKnown RBP8.65□□□□□ -1.02
PVT1-206ENST00000517838 KATNBL1Q9H079 304 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 MTIF3Q9H2K0 278 aaKnown RBP8.65□□□□□ -1.02
PVT1-206ENST00000517838 SPC25Q9HBM1 224 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 GOPCQ9HD26 462 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 PDRG1Q9NUG6 133 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 PAG1Q9NWQ8 432 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 PLA2G2EQ9NZK7 142 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 PCDHA11Q9Y5I1 949 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 CYP46A1Q9Y6A2 500 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 SLC4A7Q9Y6M7 1214 aa8.65□□□□□ -1.02
PVT1-206ENST00000517838 A0A0G2JMZ2 1700 aa8.65□□□□□ -1.03
PVT1-206ENST00000517838 FOCADQ5VW36 1801 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 EPOPA6NHQ4 379 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 F5H6K3 240 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 RAD21O60216 631 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 RNF40O75150 1001 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 CHGBP05060 677 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 ATP2A2P16615 1042 aaKnown RBP8.64□□□□□ -1.03
PVT1-206ENST00000517838 NCLP19338 710 aaKnown RBP8.64□□□□□ -1.03
PVT1-206ENST00000517838 PTGS1P23219 599 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 KLRC3Q07444 240 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 TTF1Q15361 905 aaPredicted RBP8.64□□□□□ -1.03
PVT1-206ENST00000517838 SKIV2LQ15477 1246 aaKnown RBP8.64□□□□□ -1.03
PVT1-206ENST00000517838 SKOR2Q2VWA4 1001 aaPredicted RBP8.64□□□□□ -1.03
PVT1-206ENST00000517838 TMEM31Q5JXX7 168 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 CREB3L3Q68CJ9 461 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 KRT40Q6A162 431 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 MCTP1Q6DN14 999 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 ARMCX2Q7L311 632 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 CCDC144CPQ8IYA2 1237 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 PRPF38AQ8NAV1 312 aaKnown RBP8.64□□□□□ -1.03
PVT1-206ENST00000517838 WNT8AQ9H1J5 351 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 CERS4Q9HA82 394 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 RAVER2Q9HCJ3 691 aaKnown RBP8.64□□□□□ -1.03
PVT1-206ENST00000517838 ATP8A2Q9NTI2 1148 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 HCN4Q9Y3Q4 1203 aa8.64□□□□□ -1.03
PVT1-206ENST00000517838 SLC27A2O14975 620 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 B4GALT4O60513 344 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 GPR37L1O60883 481 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 MBD4O95243 580 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 BAG4O95429 457 aaKnown RBP8.63□□□□□ -1.03
PVT1-206ENST00000517838 NDUFB10O96000 172 aa8.63□□□□□ -1.03
PVT1-206ENST00000517838 AK2P54819 239 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms