RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 PURBQ96QR8 312 aaKnown RBP12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 SLC28A3Q9HAS3 691 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 VTA1Q9NP79 307 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 STARD7Q9NQZ5 370 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 MSRAQ9UJ68 235 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 ZNFX1Q9P2E3 1918 aaKnown RBP12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 ASTN1O14525 1302 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 ELP1O95163 1332 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 MYADML2A6NDP7 307 aa12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 ADCY6O43306 1168 aa12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 CYP21A2P08686 494 aa12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 PARP1P09874 1014 aaKnown RBP12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 CALML3P27482 149 aa12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 IRX5P78411 483 aaPredicted RBP12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 SKIV2LQ15477 1246 aaKnown RBP12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 TAPT1Q6NXT6 567 aa12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 CYB5R4Q7L1T6 521 aa12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 EEPD1Q7L9B9 569 aa12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 ADGRF4Q8IZF3 695 aa12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 GLT1D1Q96MS3 346 aa12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 MAF1Q9H063 256 aa12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 AP5M1Q9H0R1 490 aa12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 CPVLQ9H3G5 476 aa12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 GNEQ9Y223 722 aaKnown RBP12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 Q9Y3F1 56 aa12.34□□□□□ -0.43
PDGFRB-203ENST00000517660 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 DCDC2CA8MYV0 355 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 B4DLN1 442 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 DYNC1LI2O43237 492 aaPredicted RBP12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 ARHGEF15O94989 841 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 ASGR1P07306 291 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 SMPD1P17405 629 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 CDK7P50613 346 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 ALDH5A1P51649 535 aaPredicted RBP12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 MRPL12P52815 198 aaKnown RBP12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 RPS6P62753 249 aaKnown RBP12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 SEC23AQ15436 765 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 CDC37Q16543 378 aaPredicted RBP12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 PPP2R2DQ66LE6 453 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 PSRC1Q6PGN9 363 aaPredicted RBP12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 KIAA1211Q6ZU35 1233 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 MAP4K1Q92918 833 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 VTI1AQ96AJ9 217 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 MPHOSPH6Q99547 160 aaKnown RBP12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 VAT1LQ9HCJ6 419 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 PDGFCQ9NRA1 345 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 COG5Q9UP83 839 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 DDX49Q9Y6V7 483 aaKnown RBP12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 SMCHD1A6NHR9 2005 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 ABCB11O95342 1321 aa12.33□□□□□ -0.44
PDGFRB-203ENST00000517660 E7EWF7 191 aa12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 IFIT3O14879 490 aaKnown RBP12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 CTAGE5O15320 804 aa12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 DHX16O60231 1041 aaKnown RBP12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 ZEB2O60315 1214 aa12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 CABYRO75952 493 aa12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 QRICH1Q2TAL8 776 aa12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 USH1GQ495M9 461 aa12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 SLC30A10Q6XR72 485 aa12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 RALYLQ86SE5 291 aaKnown RBP12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 FBXO16Q8IX29 292 aaPredicted RBP12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 DNERQ8NFT8 737 aa12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 NCOA7Q8NI08 942 aa12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 PPP1R12CQ9BZL4 782 aa12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 JMJD4Q9H9V9 463 aa12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 IL23AQ9NPF7 189 aa12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 UMODL1Q5DID0 1318 aa12.32□□□□□ -0.44
PDGFRB-203ENST00000517660 C5orf42Q9H799 3197 aa12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 MYO9BQ13459 2157 aa12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 A0A0U1RQG5 324 aaPredicted RBP12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 RBM47A0AV96 593 aaKnown RBP12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 ERICH2A1L162 156 aa12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 KLRF2D3W0D1 207 aa12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 ARVCFO00192 962 aa12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 CYP2C18P33260 490 aa12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 BEX3Q00994 111 aa12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 PDE4DQ08499 809 aa12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 SART3Q15020 963 aaKnown RBP12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 FSCN1Q16658 493 aaKnown RBP12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 DUSP28Q4G0W2 176 aa12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 CENPQQ7L2Z9 268 aaPredicted RBP12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 TLK2Q86UE8 772 aa12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 FBXO11Q86XK2 927 aa12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 MCF2L2Q86YR7 1114 aa12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 STAG2Q8N3U4 1231 aa12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 WDR11Q9BZH6 1224 aa12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 MRPL11Q9Y3B7 192 aaKnown RBP12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 RBM8AQ9Y5S9 174 aaKnown RBP12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 PRRC2BQ5JSZ5 2229 aaKnown RBP12.31□□□□□ -0.44
PDGFRB-203ENST00000517660 PALM3A6NDB9 673 aaPredicted RBP12.3□□□□□ -0.44
PDGFRB-203ENST00000517660 EDNRBP24530 442 aa12.3□□□□□ -0.44
PDGFRB-203ENST00000517660 WTAPQ15007 396 aa12.3□□□□□ -0.44
PDGFRB-203ENST00000517660 TMEM199Q8N511 208 aa12.3□□□□□ -0.44
PDGFRB-203ENST00000517660 TBC1D5Q92609 795 aa12.3□□□□□ -0.44
PDGFRB-203ENST00000517660 HLA-CQ95604 372 aa12.3□□□□□ -0.44
PDGFRB-203ENST00000517660 AMNQ9BXJ7 453 aa12.3□□□□□ -0.44
PDGFRB-203ENST00000517660 SEZ6LQ9BYH1 1024 aa12.3□□□□□ -0.44
PDGFRB-203ENST00000517660 CERS4Q9HA82 394 aa12.3□□□□□ -0.44
PDGFRB-203ENST00000517660 MAD2L2Q9UI95 211 aa12.3□□□□□ -0.44
PDGFRB-203ENST00000517660 TAF6LQ9Y6J9 622 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms