RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 RGPD1P0DJD0 1748 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 OR52Z1P0C646 297 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 PDE6BP35913 854 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 ATP1A2P50993 1020 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 PTPROQ16827 1216 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 GPBP1Q86WP2 473 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 KLHL7Q8IXQ5 586 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 TUBGCP2Q9BSJ2 902 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 PSD3Q9NYI0 1048 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 PCDHA1Q9Y5I3 950 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 FAM205CA6NFA0 338 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 GOLGA8KD6RF30 607 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 NOP56O00567 594 aaKnown RBP11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 FOXP4Q8IVH2 680 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 CTTNBP2NLQ9P2B4 639 aa11.93□□□□□ -0.5
PCDHGA1-202ENST00000517417 KIF4AO95239 1232 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 ALAS1P13196 640 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 ICA1Q05084 483 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 SOS2Q07890 1332 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 ACTN4O43707 911 aaKnown RBP11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 SORBS3O60504 671 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 PLEKHA8P1O95397 391 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 EEF1GP26641 437 aaKnown RBP11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 CYP27A1Q02318 531 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 CCDC121Q6ZUS5 278 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 CPLX4Q7Z7G2 160 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 NT5C3AQ9H0P0 336 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 KCNK9Q9NPC2 374 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 SERPINA10Q9UK55 444 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 BCS1LQ9Y276 419 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 JRKLQ9Y4A0 524 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 HYOU1Q9Y4L1 999 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 ZBED4O75132 1171 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 SERPINB2P05120 415 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 USP17L8P0C7I0 530 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 LONP1P36776 959 aaKnown RBP11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 CYP2J2P51589 502 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 BEND6Q5SZJ8 279 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 MB21D1Q8N884 522 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 CHURC1Q8WUH1 139 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 DYNLL2Q96FJ2 89 aa11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 MTRF1LQ9UGC7 380 aaKnown RBP11.92□□□□□ -0.5
PCDHGA1-202ENST00000517417 TRIM49BA6NDI0 452 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 CALRP27797 417 aaKnown RBP11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 SLFN13Q68D06 897 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 SEPT12Q8IYM1 358 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 STAG1Q8WVM7 1258 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 GPR101Q96P66 508 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 PRPF3O43395 683 aaKnown RBP11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 GYPCP04921 128 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 GGCXP38435 758 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 USP14P54578 494 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 STRN3Q13033 797 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 MYOCDQ8IZQ8 938 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 ANKRD13CQ8N6S4 541 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 NOA1Q8NC60 698 aaKnown RBP11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 MRRFQ96E11 262 aaKnown RBP11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 CNOT6LQ96LI5 555 aaKnown RBP11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 DBNDD1Q9H9R9 158 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 CAPN7Q9Y6W3 813 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 ABCC12Q96J65 1359 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 A0A087WUV0 522 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 CLRN2A0PK11 232 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 CA8P35219 290 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 SLC16A2P36021 539 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 MRPS25P82663 173 aaKnown RBP11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 CFAP221Q4G0U5 840 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 SEL1L2Q5TEA6 688 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 FBXL16Q8N461 479 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 SUPT20HQ8NEM7 779 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 HNRNPLLQ8WVV9 542 aaKnown RBP11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 NHEJ1Q9H9Q4 299 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 OVOS2A0A0G2JMS6 1433 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 XDHP47989 1333 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 CACNA1FO60840 1977 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 A6NNZ2 444 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 DDAH1O94760 285 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 GUCY2FP51841 1108 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 PAK2Q13177 524 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 TUBB8Q3ZCM7 444 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 SFMBT2Q5VUG0 894 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 KCTD16Q68DU8 428 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 NLGN1Q8N2Q7 840 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 ARFGAP2Q8N6H7 521 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 CCDC26Q8TAB7 109 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 ISCA1Q9BUE6 129 aa11.91□□□□□ -0.5
PCDHGA1-202ENST00000517417 BUB1O43683 1085 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 ATP1A1P05023 1023 aaKnown RBP11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 TBX2Q13207 712 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 FBF1Q8TES7 1133 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 KIFAP3Q92845 792 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 CHP1Q99653 195 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 TRIM10Q9UDY6 481 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 NWD1Q149M9 1564 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 TTC26A0AVF1 554 aa11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 TCP1P17987 556 aaKnown RBP11.9□□□□□ -0.5
PCDHGA1-202ENST00000517417 TRPC3Q13507 836 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms