RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 ADAMTS19Q8TE59 1207 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ARNTL2Q8WYA1 636 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PURBQ96QR8 312 aaKnown RBP8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 UBAC1Q9BSL1 405 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 RANBP17Q9H2T7 1088 aaKnown RBP8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CERS4Q9HA82 394 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 IL17RBQ9NRM6 502 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CXXC1Q9P0U4 656 aaPredicted RBP8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ANAPC4Q9UJX5 808 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PCDHA11Q9Y5I1 949 aa8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 DDX49Q9Y6V7 483 aaKnown RBP8.62□□□□□ -1.03
TNFRSF11B-202ENST00000517352 UMODL1Q5DID0 1318 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 HIP1O00291 1037 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 TLL1O43897 1013 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PURAQ00577 322 aaKnown RBP8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 STXBP2Q15833 593 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PTGISQ16647 500 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 IMMTQ16891 758 aaKnown RBP8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 NBPF20Q3BBV1 942 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 SLC30A10Q6XR72 485 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 DHX37Q8IY37 1157 aaKnown RBP8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 USP38Q8NB14 1042 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 NSUN6Q8TEA1 469 aaKnown RBP8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 FAM227BQ96M60 508 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 FGD4Q96M96 766 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PHF12Q96QT6 1004 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 SLC9A7Q96T83 725 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ZKSCAN3Q9BRR0 538 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 KATNBL1Q9H079 304 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 RWDD1Q9H446 243 aaPredicted RBP8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PCDHB15Q9Y5E8 787 aa8.61□□□□□ -1.03
TNFRSF11B-202ENST00000517352 A0A0G2JMZ2 1700 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ASTN1O14525 1302 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ERICH2A1L162 156 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CTAGE5O15320 804 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 GALR2O43603 387 aaPredicted RBP8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 GH1P01241 217 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CA3P07451 260 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PARP1P09874 1014 aaKnown RBP8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 GOLGA8HP0CJ92 632 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 HSPD1P10809 573 aaKnown RBP8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PDHBP11177 359 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PTGS1P23219 599 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PDE1AP54750 535 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 NKX3-2P78367 333 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PTPN11Q06124 597 aaPredicted RBP8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 TRDNQ13061 729 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 TRAF1Q13077 416 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 NMIQ13287 307 aaPredicted RBP8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ALX1Q15699 326 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 NFRKBQ6P4R8 1299 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 SLC43A3Q8NBI5 491 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PHOSPHO2Q8TCD6 241 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 RMDN3Q96TC7 470 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 KATNAL1Q9BW62 490 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 LNPKQ9C0E8 428 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 UBA5Q9GZZ9 404 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 TCP11L1Q9NUJ3 509 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CTNNA3Q9UI47 895 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 MRPL11Q9Y3B7 192 aaKnown RBP8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 MRVI1Q9Y6F6 885 aa8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 BAZ2AQ9UIF9 1905 aaKnown RBP8.6□□□□□ -1.03
TNFRSF11B-202ENST00000517352 VCANP13611 3396 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ABCB11O95342 1321 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CCDC171Q6TFL3 1326 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 MYH8P13535 1937 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CFBP00751 764 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 IQCF3P0C7M6 154 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 MYCLP12524 364 aaPredicted RBP8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 MYOGP15173 224 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 COL9A1P20849 921 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 NT5C2P49902 561 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 RRP1P56182 461 aaKnown RBP8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ZNF543Q08ER8 600 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CDC37Q16543 378 aaPredicted RBP8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 DGKDQ16760 1214 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 TMEM63BQ5T3F8 832 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 RASIP1Q5U651 963 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CWC27Q6UX04 472 aaKnown RBP8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 BTNL9Q6UXG8 535 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 RASGRP2Q7LDG7 609 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 FBXO11Q86XK2 927 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 DGKHQ86XP1 1220 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 TICAM2Q86XR7 235 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PLCD3Q8N3E9 789 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 PNMA1Q8ND90 353 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 CAGE1Q8TC20 777 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 AFG1LQ8WV93 481 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ARID3AQ99856 593 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 ALG1Q9BT22 464 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 C1QTNF1Q9BXJ1 281 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 KRT23Q9C075 422 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 WNT8AQ9H1J5 351 aa8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 YBX2Q9Y2T7 364 aaKnown RBP8.59□□□□□ -1.03
TNFRSF11B-202ENST00000517352 GRIN2DO15399 1336 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 WDR19Q8NEZ3 1342 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 A0A0D9SFI3 127 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 A6NJR5 290 aa8.58□□□□□ -1.04
TNFRSF11B-202ENST00000517352 NOP56O00567 594 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms