RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 PTPDC1A2A3K4 754 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 KLHL33A6NCF5 533 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 LRRC10BA6NIK2 292 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GOLGA8AA7E2F4 631 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GOLGA8BA8MQT2 603 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TCERG1O14776 1098 aaKnown RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DDX3YO15523 660 aaKnown RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 EPB41L2O43491 1005 aaKnown RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SNX2O60749 519 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 OFD1O75665 1012 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 KRT37O76014 449 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DLGAP3O95886 979 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CFBP00751 764 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CYP11A1P05108 521 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ITGA4P13612 1032 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 FGFR3P22607 806 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RXRBP28702 533 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NTF4P34130 210 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MAPK9P45984 424 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GPR3P46089 330 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DNM2P50570 870 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SESN3P58005 492 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NLRP12P59046 1061 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NEUROD1Q13562 356 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SNW1Q13573 536 aaKnown RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 AUHQ13825 339 aaKnown RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 KRT72Q14CN4 511 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DDB1Q16531 1140 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TMEM177Q53S58 311 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CCDC93Q567U6 631 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NBPF12Q5TAG4 269 aaPredicted RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PRAMEF13Q5VWM6 474 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SLC6A19Q695T7 634 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 POMZP3Q6PJE2 187 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SYDE1Q6ZW31 735 aaPredicted RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TRIM46Q7Z4K8 759 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MAATS1Q7Z4T9 603 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 COL23A1Q86Y22 540 aaPredicted RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 HID1Q8IV36 788 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ZC3H7AQ8IWR0 971 aaKnown RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GRAMD1CQ8IYS0 662 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 C7orf61Q8IZ16 206 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MYCT1Q8N699 235 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 IL22RA1Q8N6P7 574 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CHST14Q8NCH0 376 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 KREMEN2Q8NCW0 462 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ACRBPQ8NEB7 543 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DCAF4Q8WV16 495 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 JADE3Q92613 823 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GTPBP3Q969Y2 492 aaKnown RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RCC1LQ96I51 464 aaKnown RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CCDC138Q96M89 665 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NUP88Q99567 741 aaPredicted RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MCMBPQ9BTE3 642 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CENPOQ9BU64 300 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 USP26Q9BXU7 913 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RNF38Q9H0F5 515 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NKX2-4Q9H2Z4 354 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SOX17Q9H6I2 414 aaPredicted RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CABP5Q9NP86 173 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TRMT13Q9NUP7 481 aaKnown RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 OXSMQ9NWU1 459 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 RRN3Q9NYV6 651 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 EVLQ9UI08 416 aaPredicted RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TMEFF2Q9UIK5 374 aaPredicted RBP3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CDC23Q9UJX2 597 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 FBXL21Q9UKT6 434 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MINPP1Q9UNW1 487 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 POLHQ9Y253 713 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MRFAP1Q9Y605 127 aa3.29□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TRIM75PA6NK02 468 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 GPR25O00155 361 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ARVCFO00192 962 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ARNTLO00327 626 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 DLL1O00548 723 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 AOC2O75106 756 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ZBED1O96006 694 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 LCP1P13796 627 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 HOXC12P31275 282 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 IL6STP40189 918 aaPredicted RBP3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 TM4SF4P48230 202 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MECP2P51608 486 aaKnown RBP3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 AFF1P51825 1210 aaKnown RBP3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SCRN1Q12765 414 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SCARF1Q14162 830 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 SLBPQ14493 270 aaKnown RBP eCLIP3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PDCD1Q15116 288 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 KIAA0753Q2KHM9 967 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ANKRD39Q53RE8 183 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 NOL9Q5SY16 702 aaKnown RBP3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 ICE2Q659A1 982 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PSAPL1Q6NUJ1 521 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 LILRA6Q6PI73 481 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 OTOP3Q7RTS5 596 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 MYLK4Q86YV6 388 aaPredicted RBP3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 PPIL6Q8IXY8 311 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CNPY4Q8N129 248 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 FAM43AQ8N2R8 423 aa3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 CRACR2BQ8N4Y2 399 aaPredicted RBP3.28□□□□□ -1.88
SCARNA11.3-201ENST00000517276 FIBCD1Q8N539 461 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms