RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.01□□□□□ -0.49
TRIM41-209ENST00000515834 SLC7A5P2Q9GIP4 190 aa12.01□□□□□ -0.49
TRIM41-209ENST00000515834 BABAM1Q9NWV8 329 aa12.01□□□□□ -0.49
TRIM41-209ENST00000515834 DDX41Q9UJV9 622 aaKnown RBP12.01□□□□□ -0.49
TRIM41-209ENST00000515834 SGSM2O43147 1006 aa12.01□□□□□ -0.49
TRIM41-209ENST00000515834 ATF2P15336 505 aa12.01□□□□□ -0.49
TRIM41-209ENST00000515834 PHKA1P46020 1223 aa12.01□□□□□ -0.49
TRIM41-209ENST00000515834 INPP1P49441 399 aa12.01□□□□□ -0.49
TRIM41-209ENST00000515834 ACBD5Q5T8D3 534 aaPredicted RBP12.01□□□□□ -0.49
TRIM41-209ENST00000515834 ZNF467Q7Z7K2 595 aaPredicted RBP12.01□□□□□ -0.49
TRIM41-209ENST00000515834 C10orf67Q8IYJ2 551 aa12.01□□□□□ -0.49
TRIM41-209ENST00000515834 TUBBP07437 444 aa12.01□□□□□ -0.49
TRIM41-209ENST00000515834 MAP7D3Q8IWC1 876 aa12.01□□□□□ -0.49
TRIM41-209ENST00000515834 CDKL2Q92772 493 aa12.01□□□□□ -0.49
TRIM41-209ENST00000515834 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRIM41-209ENST00000515834 PNMA3Q9UL41 463 aa12.01□□□□□ -0.49
TRIM41-209ENST00000515834 MGEA5O60502 916 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 PPFIA4O75335 1185 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 PSMD2Q13200 908 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 MTMR3Q13615 1198 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 B4GALNT4Q76KP1 1039 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 LEMD3Q9Y2U8 911 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 BAG2O95816 211 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 CD58P19256 250 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 PDE1BQ01064 536 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 MESDQ14696 234 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 SZRD1Q7Z422 152 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 PNMA8AQ86V59 439 aaPredicted RBP12□□□□□ -0.49
TRIM41-209ENST00000515834 ACRBPQ8NEB7 543 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 FRMD4AQ9P2Q2 1039 aaPredicted RBP12□□□□□ -0.49
TRIM41-209ENST00000515834 MFAP3P55082 362 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 LMNTD2Q8IXW0 634 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 SMC5Q8IY18 1101 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 TTC25Q96NG3 672 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 THOC5Q13769 683 aaKnown RBP12□□□□□ -0.49
TRIM41-209ENST00000515834 SPDL1Q96EA4 605 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 NT5C1BQ96P26 610 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 HAUS8Q9BT25 410 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 HACD3Q9P035 362 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 FAM8A1Q9UBU6 413 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 ABCC10Q5T3U5 1492 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 NEMP1O14524 444 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 SEMA3EO15041 775 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 ARHGAP6O43182 974 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 SMIM24O75264 130 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 ATP5JP18859 108 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 ADORA1P30542 326 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 ADD1P35611 737 aaKnown RBP12□□□□□ -0.49
TRIM41-209ENST00000515834 AOC3Q16853 763 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 RASGRP4Q8TDF6 673 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 RMDN2Q96LZ7 410 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 WDR62O43379 1518 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 USP17L3A6NCW0 530 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 USP17L4A6NCW7 530 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 ZNF233A6NK53 670 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 COG7P83436 770 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 MYO1EQ12965 1108 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 RWDD4Q6NW29 188 aaKnown RBP12□□□□□ -0.49
TRIM41-209ENST00000515834 KRBA2Q6ZNG9 492 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 USP17L1Q7RTZ2 530 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 CROCCP2Q86T23 111 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 TTLL6Q8N841 843 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 SDCCAG3Q96C92 435 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 FGD4Q96M96 766 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 HEXIM2Q96MH2 286 aaKnown RBP12□□□□□ -0.49
TRIM41-209ENST00000515834 ZNF341Q9BYN7 854 aa12□□□□□ -0.49
TRIM41-209ENST00000515834 METTL14Q9HCE5 456 aaKnown RBP12□□□□□ -0.49
TRIM41-209ENST00000515834 EIF2AK4Q9P2K8 1649 aaKnown RBP11.99□□□□□ -0.49
TRIM41-209ENST00000515834 DENND3A2RUS2 1198 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 CLIC2O15247 247 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 BMP3P12645 472 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 DBN1Q16643 649 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 SEPT12Q8IYM1 358 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 SEC31BQ9NQW1 1179 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 MAP3K1Q13233 1512 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 POC1B-GALNT4F8VUJ3 575 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 GPC4O75487 556 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 PDXDC2PQ6P474 469 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 NOSTRINQ8IVI9 506 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 COA7Q96BR5 231 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 PRAG1Q86YV5 1406 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 CTNNA1P35221 906 aaKnown RBP11.99□□□□□ -0.49
TRIM41-209ENST00000515834 SYDE2Q5VT97 1194 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 OR6B2Q6IFH4 312 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 ZMYM6O95789 1325 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 LLGL1Q15334 1064 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 RNF181Q9P0P0 153 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 PIM2Q9P1W9 311 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 SRP68Q9UHB9 627 aaKnown RBP11.99□□□□□ -0.49
TRIM41-209ENST00000515834 FOSP01100 380 aaPredicted RBP11.99□□□□□ -0.49
TRIM41-209ENST00000515834 SNX1Q13596 522 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 CCDC17Q96LX7 622 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 LRGUKQ96M69 825 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 SFMBT1Q9UHJ3 866 aa11.99□□□□□ -0.49
TRIM41-209ENST00000515834 DDAH1O94760 285 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 RPN1P04843 607 aaKnown RBP11.98□□□□□ -0.49
TRIM41-209ENST00000515834 ARHGEF37A1IGU5 675 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 SYNDIG1LA6NDD5 238 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 ATP6V1E1P36543 226 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 ZNF827Q17R98 1081 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms