RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-222ENST00000515494 C16orf45Q96MC5 204 aaPredicted RBP11.83□□□□□ -0.51
CDK18-222ENST00000515494 GEMIN8Q9NWZ8 242 aaKnown RBP11.83□□□□□ -0.51
CDK18-222ENST00000515494 GDAQ9Y2T3 454 aa11.83□□□□□ -0.51
CDK18-222ENST00000515494 FAM83BQ5T0W9 1011 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 CREBRFQ8IUR6 639 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 ST7Q9NRC1 585 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 SPTLC3Q9NUV7 552 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 TRMT1Q9NXH9 659 aaKnown RBP11.83□□□□□ -0.52
CDK18-222ENST00000515494 GGA3Q9NZ52 723 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 NYAP2Q9P242 653 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 HERC5Q9UII4 1024 aaKnown RBP11.83□□□□□ -0.52
CDK18-222ENST00000515494 PCDHA1Q9Y5I3 950 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 NPM3O75607 178 aaKnown RBP11.83□□□□□ -0.52
CDK18-222ENST00000515494 PLCG1P19174 1290 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 ZNF280AP59817 542 aaPredicted RBP11.83□□□□□ -0.52
CDK18-222ENST00000515494 RAD51AP2Q09MP3 1159 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 CDC37Q16543 378 aaPredicted RBP11.83□□□□□ -0.52
CDK18-222ENST00000515494 TRIML1Q8N9V2 468 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 GSDMAQ96QA5 445 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 PSTPIP2Q9H939 334 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 FBXO28Q9NVF7 368 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 CTNND2Q9UQB3 1225 aa11.83□□□□□ -0.52
CDK18-222ENST00000515494 ESYT2A0FGR8 921 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 POTEMA6NI47 508 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 PPP1R3GB7ZBB8 358 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 HIRAP54198 1017 aaPredicted RBP11.82□□□□□ -0.52
CDK18-222ENST00000515494 CCZ1BP86790 482 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 CCZ1P86791 482 aaPredicted RBP11.82□□□□□ -0.52
CDK18-222ENST00000515494 CABP7Q86V35 215 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 ZKSCAN4Q969J2 545 aaPredicted RBP11.82□□□□□ -0.52
CDK18-222ENST00000515494 RASSF4Q9H2L5 321 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 MTMR14Q8NCE2 650 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 BANK1Q8NDB2 785 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 ENOX1Q8TC92 643 aaKnown RBP11.82□□□□□ -0.52
CDK18-222ENST00000515494 EEF2KMTQ96G04 330 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDK18-222ENST00000515494 V9GYY5 206 aaPredicted RBP11.82□□□□□ -0.52
CDK18-222ENST00000515494 CCDC174Q6PII3 467 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 KIF18AQ8NI77 898 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 MKL1Q969V6 931 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 KIFC2Q96AC6 838 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 TEPSINQ96N21 525 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 ZNF341Q9BYN7 854 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 RIC8AQ9NPQ8 531 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 DACH1Q9UI36 760 aa11.82□□□□□ -0.52
CDK18-222ENST00000515494 PSME4Q14997 1843 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 GTPBP6O43824 516 aaPredicted RBP11.81□□□□□ -0.52
CDK18-222ENST00000515494 RPN1P04843 607 aaKnown RBP11.81□□□□□ -0.52
CDK18-222ENST00000515494 CAP2P40123 477 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 PSEN1P49768 467 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 CALCRLQ16602 461 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 C9orf131Q5VYM1 1079 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 CUL5Q93034 780 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 SYNRGQ9UMZ2 1314 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 SMCHD1A6NHR9 2005 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 BMP3P12645 472 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 ZNF18P17022 549 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 RPS12P25398 132 aaKnown RBP11.81□□□□□ -0.52
CDK18-222ENST00000515494 GPR162Q16538 588 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 FAM83AQ86UY5 434 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 MMTAG2Q9BU76 263 aaKnown RBP11.81□□□□□ -0.52
CDK18-222ENST00000515494 GPRC5DQ9NZD1 345 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 LTBP3Q9NS15 1303 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 P2RX7Q99572 595 aaKnown RBP11.81□□□□□ -0.52
CDK18-222ENST00000515494 NUDT12Q9BQG2 462 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 ARHGEF10LQ9HCE6 1279 aa11.81□□□□□ -0.52
CDK18-222ENST00000515494 CCDC112Q8NEF3 446 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 MTMR8Q96EF0 704 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 YY1AP1Q9H869 796 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 PGAP2Q9UHJ9 254 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 GREB1LQ9C091 1923 aaPredicted RBP11.8□□□□□ -0.52
CDK18-222ENST00000515494 TEX33O43247 280 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 TNNT1P13805 278 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 SFPQP23246 707 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDK18-222ENST00000515494 PRPHP41219 470 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 MMP14P50281 582 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
CDK18-222ENST00000515494 HPS3Q969F9 1004 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 CCSER1Q9C0I3 900 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 TRIM49BA6NDI0 452 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 hCG_1984214I3L0E3 225 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 LAD1O00515 517 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 PRCPP42785 496 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 TNFAIP1Q13829 316 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 TPD52L1Q16890 204 aaPredicted RBP11.8□□□□□ -0.52
CDK18-222ENST00000515494 ZNF713Q8N859 430 aaPredicted RBP11.8□□□□□ -0.52
CDK18-222ENST00000515494 DCAF4Q8WV16 495 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 MTMR9Q96QG7 549 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 LRWD1Q9UFC0 647 aa11.8□□□□□ -0.52
CDK18-222ENST00000515494 CTIFO43310 598 aaKnown RBP11.79□□□□□ -0.52
CDK18-222ENST00000515494 ERCC5P28715 1186 aaPredicted RBP11.79□□□□□ -0.52
CDK18-222ENST00000515494 HOXA13P31271 388 aaPredicted RBP11.79□□□□□ -0.52
CDK18-222ENST00000515494 GYS2P54840 703 aa11.79□□□□□ -0.52
CDK18-222ENST00000515494 MARCH6O60337 910 aa11.79□□□□□ -0.52
CDK18-222ENST00000515494 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
CDK18-222ENST00000515494 KMT5BQ4FZB7 885 aa11.79□□□□□ -0.52
CDK18-222ENST00000515494 VSTM4Q8IW00 320 aa11.79□□□□□ -0.52
CDK18-222ENST00000515494 MYCBPQ99417 103 aaPredicted RBP11.79□□□□□ -0.52
CDK18-222ENST00000515494 DDX25Q9UHL0 483 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms