RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 MARCH6O60337 910 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 TRAF1Q13077 416 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 TMEM132BQ14DG7 1078 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 POTEEQ6S8J3 1075 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 GADL1Q6ZQY3 521 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 LRRC15Q8TF66 581 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 PAGE5Q96GU1 130 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 PURBQ96QR8 312 aaKnown RBP10.35□□□□□ -0.75
CPNE4-213ENST00000515418 TTC12Q9H892 705 aaPredicted RBP10.35□□□□□ -0.75
CPNE4-213ENST00000515418 CBX8Q9HC52 389 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 COL20A1Q9P218 1284 aa10.35□□□□□ -0.75
CPNE4-213ENST00000515418 WDR90Q96KV7 1748 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 CYP3A7-CYP3A51PA0A087WV96 503 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 POTEMA6NI47 508 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 SOCS7O14512 581 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 CYP3A7P24462 503 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 ZNF76P36508 570 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 SREBF1P36956 1147 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 POSTNQ15063 836 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 E2F4Q16254 413 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 DPCR1Q3MIW9 517 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 SH3D19Q5HYK7 790 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 SLC30A10Q6XR72 485 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 ERO1BQ86YB8 467 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 CEP57L1Q8IYX8 460 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 IGSF22Q8N9C0 903 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 IQUBQ8NA54 791 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 RASSF8Q8NHQ8 419 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 RBM46Q8TBY0 533 aaKnown RBP10.34□□□□□ -0.75
CPNE4-213ENST00000515418 OPTNQ96CV9 577 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 TRERF1Q96PN7 1200 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 MTRQ99707 1265 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 MMTAG2Q9BU76 263 aaKnown RBP10.34□□□□□ -0.75
CPNE4-213ENST00000515418 NMRK2Q9NPI5 230 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 LRWD1Q9UFC0 647 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 ADAMTS5Q9UNA0 930 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 GCFC2P16383 781 aaKnown RBP10.34□□□□□ -0.75
CPNE4-213ENST00000515418 ZNF165P49910 485 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 PPATQ06203 517 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 ORC2Q13416 577 aaPredicted RBP10.34□□□□□ -0.75
CPNE4-213ENST00000515418 PLS1Q14651 629 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 STX1AQ16623 288 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 NAALADL2Q58DX5 795 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 SNRNP48Q6IEG0 339 aaKnown RBP10.34□□□□□ -0.75
CPNE4-213ENST00000515418 PDXDC2PQ6P474 469 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 ARMC9Q7Z3E5 817 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 CABP7Q86V35 215 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 REPS2Q8NFH8 660 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 LENG9Q96B70 501 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 NUDT12Q9BQG2 462 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 BLZF1Q9H2G9 400 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 HOXC10Q9NYD6 342 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 TUBE1Q9UJT0 475 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 PCDHA12Q9UN75 941 aa10.34□□□□□ -0.75
CPNE4-213ENST00000515418 SPDYE16A6NNV3 312 aaPredicted RBP10.33□□□□□ -0.76
CPNE4-213ENST00000515418 BMP6P22004 513 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 GJA5P36382 358 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 STAT3P40763 770 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 STAT6P42226 847 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 HSD17B4P51659 736 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 PLCB2Q00722 1185 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 MKRN3Q13064 507 aaKnown RBP10.33□□□□□ -0.76
CPNE4-213ENST00000515418 RRAGBQ5VZM2 374 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 MCTP2Q6DN12 878 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 NSMFQ6X4W1 530 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 SH3RF1Q7Z6J0 888 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 FAM200AQ8TCP9 573 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 SLC10A4Q96EP9 437 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 MBOAT7Q96N66 472 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 TAAR1Q96RJ0 339 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 KCNMB3Q9NPA1 279 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 DISC1Q9NRI5 854 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 ANO10Q9NW15 660 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 ZNF214Q9UL59 606 aaPredicted RBP10.33□□□□□ -0.76
CPNE4-213ENST00000515418 PAPPA2Q9BXP8 1791 aa10.33□□□□□ -0.76
CPNE4-213ENST00000515418 A0A0G2JLL6 359 aaPredicted RBP10.32□□□□□ -0.76
CPNE4-213ENST00000515418 SPDYE5A6NIY4 337 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 AP5Z1O43299 807 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 CYP3A4P08684 503 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 TXLNAP40222 546 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 FXR2P51116 673 aaKnown RBP eCLIP10.32□□□□□ -0.76
CPNE4-213ENST00000515418 NLRP12P59046 1061 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 RPS6P62753 249 aaKnown RBP10.32□□□□□ -0.76
CPNE4-213ENST00000515418 CUL4BQ13620 913 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 PDIA5Q14554 519 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 LDLRAD1Q5T700 205 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 KANK3Q6NY19 840 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 PRRT2Q7Z6L0 340 aaPredicted RBP10.32□□□□□ -0.76
CPNE4-213ENST00000515418 IL31RAQ8NI17 732 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 ETNPPLQ8TBG4 499 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 AK8Q96MA6 479 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 CCSER1Q9C0I3 900 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 RNF146Q9NTX7 359 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 IGLV3-22A0A075B6J6 115 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 MSH4O15457 936 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 PLCG1P19174 1290 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 CIITAP33076 1130 aa10.32□□□□□ -0.76
CPNE4-213ENST00000515418 SARSP49591 514 aaKnown RBP10.32□□□□□ -0.76
CPNE4-213ENST00000515418 BAATQ14032 418 aaPredicted RBP10.32□□□□□ -0.76
CPNE4-213ENST00000515418 DHX8Q14562 1220 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms