RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 GTF2IRD2Q86UP8 949 aa7.38□□□□□ -1.23
CAST-243ENST00000515160 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.38□□□□□ -1.23
CAST-243ENST00000515160 PPP1R13LQ8WUF5 828 aa7.38□□□□□ -1.23
CAST-243ENST00000515160 SCLYQ96I15 445 aa7.38□□□□□ -1.23
CAST-243ENST00000515160 BTBD6Q96KE9 485 aa7.38□□□□□ -1.23
CAST-243ENST00000515160 KREMEN1Q96MU8 473 aa7.38□□□□□ -1.23
CAST-243ENST00000515160 PUS7LQ9H0K6 701 aaKnown RBP7.38□□□□□ -1.23
CAST-243ENST00000515160 RNF208Q9H0X6 261 aa7.38□□□□□ -1.23
CAST-243ENST00000515160 SUGCTQ9HAC7 445 aa7.38□□□□□ -1.23
CAST-243ENST00000515160 ZIM2Q9NZV7 527 aa7.38□□□□□ -1.23
CAST-243ENST00000515160 CGGBP1Q9UFW8 167 aaPredicted RBP7.38□□□□□ -1.23
CAST-243ENST00000515160 FBXL21Q9UKT6 434 aa7.38□□□□□ -1.23
CAST-243ENST00000515160 DIS3Q9Y2L1 958 aaKnown RBP7.38□□□□□ -1.23
CAST-243ENST00000515160 E2F8A0AVK6 867 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 BLACEA4D250 179 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 AKAP10O43572 662 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 NID1P14543 1247 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 HOXC12P31275 282 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 GFRA1P56159 465 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 SOX4Q06945 474 aaPredicted RBP7.37□□□□□ -1.23
CAST-243ENST00000515160 BIRC2Q13490 618 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 SEPT7Q16181 437 aaKnown RBP7.37□□□□□ -1.23
CAST-243ENST00000515160 BRINP3Q76B58 766 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 SMC5Q8IY18 1101 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 CHPFQ8IZ52 775 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 MYO1HQ8N1T3 1032 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 SMG8Q8ND04 991 aaKnown RBP7.37□□□□□ -1.23
CAST-243ENST00000515160 BRF1Q92994 677 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 ACDQ96AP0 544 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 IFT22Q9H7X7 185 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 AASDHPPTQ9NRN7 309 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 PCDHB12Q9Y5F1 795 aa7.37□□□□□ -1.23
CAST-243ENST00000515160 ZFYVE9O95405 1425 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 CEP162Q5TB80 1403 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 NCOA3Q9Y6Q9 1424 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 PIK3R2O00459 728 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 PLIN1O60240 522 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 EIF3JO75822 258 aaKnown RBP7.36□□□□□ -1.23
CAST-243ENST00000515160 SNRPB2P08579 225 aaKnown RBP7.36□□□□□ -1.23
CAST-243ENST00000515160 ATF3P18847 181 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 ASPAP45381 313 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 ZNF445P59923 1031 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 TMPRSS15P98073 1019 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 IDI1Q13907 227 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 SF1Q15637 639 aaKnown RBP7.36□□□□□ -1.23
CAST-243ENST00000515160 MAP9Q49MG5 647 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 CDCA2Q69YH5 1023 aaPredicted RBP7.36□□□□□ -1.23
CAST-243ENST00000515160 ARMCX6Q7L4S7 300 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 PASD1Q8IV76 773 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 SMYD4Q8IYR2 804 aaPredicted RBP7.36□□□□□ -1.23
CAST-243ENST00000515160 OR2W6PQ8NHA6 318 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 DNAJB8Q8NHS0 232 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 PI4K2BQ8TCG2 481 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 VWCEQ96DN2 955 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 CCDC8Q9H0W5 538 aaPredicted RBP7.36□□□□□ -1.23
CAST-243ENST00000515160 PCOLCE2Q9UKZ9 415 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 FHOD1Q9Y613 1164 aa7.36□□□□□ -1.23
CAST-243ENST00000515160 TCRBV16S1A1N1A0A5B0 115 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 OIP5O43482 229 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 ZEB2O60315 1214 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 CPP00450 1065 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 KRT18P05783 430 aaKnown RBP7.35□□□□□ -1.23
CAST-243ENST00000515160 AMPD1P23109 780 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 SCNN1BP51168 640 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 GRB10Q13322 594 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 UBE4AQ14139 1066 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 HLTFQ14527 1009 aaKnown RBP eCLIP7.35□□□□□ -1.23
CAST-243ENST00000515160 PPP2R5DQ14738 602 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 NTRK3Q16288 839 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 TRAPPC3LQ5T215 181 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 ACAD11Q709F0 780 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 ZBTB46Q86UZ6 589 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 SYTL5Q8TDW5 730 aaPredicted RBP7.35□□□□□ -1.23
CAST-243ENST00000515160 CHMP4CQ96CF2 233 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 WNK4Q96J92 1243 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 RPS6KC1Q96S38 1066 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 YIPF4Q9BSR8 244 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 ASPNQ9BXN1 380 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 NKX2-4Q9H2Z4 354 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 GSX1Q9H4S2 264 aaPredicted RBP7.35□□□□□ -1.23
CAST-243ENST00000515160 NOL6Q9H6R4 1146 aaKnown RBP7.35□□□□□ -1.23
CAST-243ENST00000515160 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.35□□□□□ -1.23
CAST-243ENST00000515160 SPEF1Q9Y4P9 236 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 ASXL1Q8IXJ9 1541 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 EHBP1L1Q8N3D4 1523 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 BCL9LQ86UU0 1499 aa7.35□□□□□ -1.23
CAST-243ENST00000515160 PNPLA6Q8IY17 1366 aa7.34□□□□□ -1.23
CAST-243ENST00000515160 MYO5BQ9ULV0 1848 aa7.34□□□□□ -1.23
CAST-243ENST00000515160 ADGRB3O60242 1522 aa7.34□□□□□ -1.23
CAST-243ENST00000515160 DLL1O00548 723 aa7.34□□□□□ -1.23
CAST-243ENST00000515160 AQP7O14520 342 aa7.34□□□□□ -1.23
CAST-243ENST00000515160 WISP1O95388 367 aa7.34□□□□□ -1.23
CAST-243ENST00000515160 DRD2P14416 443 aa7.34□□□□□ -1.23
CAST-243ENST00000515160 NAT1P18440 290 aa7.34□□□□□ -1.23
CAST-243ENST00000515160 PIN1Q13526 163 aaPredicted RBP7.34□□□□□ -1.23
CAST-243ENST00000515160 COL9A3Q14050 684 aaPredicted RBP7.34□□□□□ -1.23
CAST-243ENST00000515160 NBPF9Q3BBW0 867 aa7.34□□□□□ -1.23
CAST-243ENST00000515160 ZMYM1Q5SVZ6 1142 aa7.34□□□□□ -1.23
CAST-243ENST00000515160 PIK3R6Q5UE93 754 aa7.34□□□□□ -1.23
CAST-243ENST00000515160 LETMD1Q6P1Q0 360 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms