RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 FAM84BQ96KN1 310 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 OSBPL10Q9BXB5 764 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 HSD3B7Q9H2F3 369 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 WDR37Q9Y2I8 494 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 IRS2Q9Y4H2 1338 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 CAPN7Q9Y6W3 813 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 PPP1R37O75864 691 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 RNF8O76064 485 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 DESP17661 470 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 ROR2Q01974 943 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 EVX2Q03828 476 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 ACTN3Q08043 901 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 FAM98CQ17RN3 349 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 RESP18Q5W5W9 173 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 STK11IPQ8N1F8 1099 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 CMTR1Q8N1G2 835 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 CCDC150Q8NCX0 1101 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 GABPB2Q8TAK5 448 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 MPP4Q96JB8 637 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 CLIC6Q96NY7 704 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 ZCWPW1Q9H0M4 648 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 ZNHIT6Q9NWK9 470 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 TUBE1Q9UJT0 475 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 SPO11Q9Y5K1 396 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 COMMD10Q9Y6G5 202 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 UBR3Q6ZT12 1888 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 BECN2A8MW95 431 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 BIN1O00499 593 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 NDUFB5O43674 189 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 FGRP09769 529 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 RCAN1P53805 252 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 DYNLL1P63167 89 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 SSRP1Q08945 709 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 CUL4BQ13620 913 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 WTAPQ15007 396 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 CEP85LQ5SZL2 805 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 CATIPQ7Z7H3 387 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 WDR75Q8IWA0 830 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 SDF4Q9BRK5 362 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 NACAP1Q9BZK3 213 aa8.28□□□□□ -1.08
PDLIM5-219ENST00000514743 MAGEB6P1A0A0J9YX57 407 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 USP27XA6NNY8 438 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 NLRP12P59046 1061 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 MYBPC3Q14896 1274 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 NOSTRINQ8IVI9 506 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 LRRC8AQ8IWT6 810 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 ZNF654Q8IZM8 581 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 CRACR2BQ8N4Y2 399 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 CCDC102AQ96A19 550 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 GORASP1Q9BQQ3 440 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 CENPHQ9H3R5 247 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 BATF3Q9NR55 127 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 PCDHGC5Q9Y5F6 944 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 TNKSO95271 1327 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 ZC3H4Q9UPT8 1303 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 CYP2D7A0A087X1C5 515 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 BTBD18B2RXH4 712 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 TGFB3P10600 412 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 MATR3P43243 847 aaKnown RBP eCLIP8.27□□□□□ -1.091e-6■■■□□ 17.1
PDLIM5-219ENST00000514743 GCLCP48506 637 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 CUL3Q13618 768 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 RTN1Q16799 776 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 FAM117BQ6P1L5 589 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 MTHFD1LQ6UB35 978 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 FBXO33Q7Z6M2 555 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 HDAC7Q8WUI4 952 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 SH3GL1Q99961 368 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 GABBR1Q9UBS5 961 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 KCNJ14Q9UNX9 436 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 FOCADQ5VW36 1801 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 SLC3A2P08195 630 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 MLLT3P42568 568 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 CCZ1BP86790 482 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 CCZ1P86791 482 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 GRIN1Q05586 938 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 FUT2Q10981 343 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 SLC4A8Q2Y0W8 1093 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 GNPTABQ3T906 1256 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 C11orf96Q7Z7L8 435 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 SLC51AQ86UW1 340 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 METTL16Q86W50 562 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 ENAHQ8N8S7 591 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 FANCBQ8NB91 859 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 SLC35B4Q969S0 331 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 JAKMIP2Q96AA8 810 aa8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 PAPOLBQ9NRJ5 636 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 SRP68Q9UHB9 627 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-219ENST00000514743 PDS5AQ29RF7 1337 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 SLC26A4O43511 780 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 SASH3O75995 380 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 SYKP43405 635 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 PTPN14Q15678 1187 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 GJC2Q5T442 439 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 FOXP4Q8IVH2 680 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 DIS3L2Q8IYB7 885 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 ERMNQ8TAM6 284 aa8.26□□□□□ -1.09
PDLIM5-219ENST00000514743 FAM76AQ8TAV0 307 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms