RNA–Protein interactions for RNA: ENST00000514552.5

PDE4D-222, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-222ENST00000514552 ATG4CQ96DT6 458 aa9.12□□□□□ -0.95
PDE4D-222ENST00000514552 CCDC74BQ96LY2 380 aa9.12□□□□□ -0.95
PDE4D-222ENST00000514552 STRIP2Q9ULQ0 834 aa9.12□□□□□ -0.95
PDE4D-222ENST00000514552 CEP131Q9UPN4 1083 aa9.12□□□□□ -0.95
PDE4D-222ENST00000514552 KNSTRNQ9Y448 316 aa9.12□□□□□ -0.95
PDE4D-222ENST00000514552 BRCA1P38398 1863 aaKnown RBP9.11□□□□□ -0.95
PDE4D-222ENST00000514552 CYP26A1O43174 497 aa9.11□□□□□ -0.95
PDE4D-222ENST00000514552 FOSL1P15407 271 aa9.11□□□□□ -0.95
PDE4D-222ENST00000514552 RAG1P15918 1043 aa9.11□□□□□ -0.95
PDE4D-222ENST00000514552 GRIK1P39086 918 aa9.11□□□□□ -0.95
PDE4D-222ENST00000514552 ARSHQ5FYA8 562 aa9.11□□□□□ -0.95
PDE4D-222ENST00000514552 FBXW10Q5XX13 1052 aa9.11□□□□□ -0.95
PDE4D-222ENST00000514552 INTS5Q6P9B9 1019 aaKnown RBP9.11□□□□□ -0.95
PDE4D-222ENST00000514552 NLRC3Q7RTR2 1065 aa9.11□□□□□ -0.95
PDE4D-222ENST00000514552 PHACTR4Q8IZ21 702 aa9.11□□□□□ -0.95
PDE4D-222ENST00000514552 DNAJB8Q8NHS0 232 aa9.11□□□□□ -0.95
PDE4D-222ENST00000514552 RIN3Q8TB24 985 aa9.11□□□□□ -0.95
PDE4D-222ENST00000514552 COX4I2Q96KJ9 171 aa9.11□□□□□ -0.95
PDE4D-222ENST00000514552 HEXIM2Q96MH2 286 aaKnown RBP9.11□□□□□ -0.95
PDE4D-222ENST00000514552 SRRTQ9BXP5 876 aaKnown RBP9.11□□□□□ -0.95
PDE4D-222ENST00000514552 MKNK2Q9HBH9 465 aa9.11□□□□□ -0.95
PDE4D-222ENST00000514552 PRDM5Q9NQX1 630 aaPredicted RBP9.11□□□□□ -0.95
PDE4D-222ENST00000514552 MAPK8IP1Q9UQF2 711 aa9.11□□□□□ -0.95
PDE4D-222ENST00000514552 RGS13O14921 159 aa9.1□□□□□ -0.95
PDE4D-222ENST00000514552 GYS1P13807 737 aa9.1□□□□□ -0.95
PDE4D-222ENST00000514552 CYP7A1P22680 504 aa9.1□□□□□ -0.95
PDE4D-222ENST00000514552 IL13P35225 146 aa9.1□□□□□ -0.95
PDE4D-222ENST00000514552 ETV3P41162 512 aa9.1□□□□□ -0.95
PDE4D-222ENST00000514552 MTHFSP49914 203 aa9.1□□□□□ -0.95
PDE4D-222ENST00000514552 PPP1R13LQ8WUF5 828 aa9.1□□□□□ -0.95
PDE4D-222ENST00000514552 CRBNQ96SW2 442 aa9.1□□□□□ -0.95
PDE4D-222ENST00000514552 POLR3GLQ9BT43 218 aa9.1□□□□□ -0.95
PDE4D-222ENST00000514552 PCGF6Q9BYE7 350 aa9.1□□□□□ -0.95
PDE4D-222ENST00000514552 ANTXR1Q9H6X2 564 aa9.1□□□□□ -0.95
PDE4D-222ENST00000514552 TPX2Q9ULW0 747 aaKnown RBP9.1□□□□□ -0.95
PDE4D-222ENST00000514552 NPC1L1Q9UHC9 1359 aa9.1□□□□□ -0.95
PDE4D-222ENST00000514552 ARFGEF1Q9Y6D6 1849 aa9.1□□□□□ -0.95
PDE4D-222ENST00000514552 MYH14Q7Z406 1995 aaKnown RBP9.1□□□□□ -0.95
PDE4D-222ENST00000514552 USP42Q9H9J4 1324 aaKnown RBP9.09□□□□□ -0.95
PDE4D-222ENST00000514552 COBLO75128 1261 aa9.09□□□□□ -0.95
PDE4D-222ENST00000514552 NME1P15531 152 aaKnown RBP9.09□□□□□ -0.95
PDE4D-222ENST00000514552 RFC4P35249 363 aa9.09□□□□□ -0.95
PDE4D-222ENST00000514552 CCNFP41002 786 aa9.09□□□□□ -0.95
PDE4D-222ENST00000514552 EIF6P56537 245 aaKnown RBP9.09□□□□□ -0.95
PDE4D-222ENST00000514552 ARID5AQ03989 594 aa9.09□□□□□ -0.95
PDE4D-222ENST00000514552 NAALADL2Q58DX5 795 aa9.09□□□□□ -0.95
PDE4D-222ENST00000514552 INTS3Q68E01 1043 aaKnown RBP9.09□□□□□ -0.95
PDE4D-222ENST00000514552 SULT6B1Q6IMI4 303 aa9.09□□□□□ -0.95
PDE4D-222ENST00000514552 CDH24Q86UP0 819 aa9.09□□□□□ -0.95
PDE4D-222ENST00000514552 TAB3Q8N5C8 712 aaPredicted RBP9.09□□□□□ -0.95
PDE4D-222ENST00000514552 OR6P1Q8NGX9 317 aa9.09□□□□□ -0.95
PDE4D-222ENST00000514552 KIF2CQ99661 725 aa9.09□□□□□ -0.95
PDE4D-222ENST00000514552 TM9SF2Q99805 663 aa9.09□□□□□ -0.95
PDE4D-222ENST00000514552 LRRC4CQ9HCJ2 640 aa9.09□□□□□ -0.95
PDE4D-222ENST00000514552 UBR2Q8IWV8 1755 aa9.09□□□□□ -0.95
PDE4D-222ENST00000514552 TNFRSF10CO14798 259 aa9.08□□□□□ -0.96
PDE4D-222ENST00000514552 CRKLP46109 303 aaKnown RBP9.08□□□□□ -0.96
PDE4D-222ENST00000514552 GIPRP48546 466 aa9.08□□□□□ -0.96
PDE4D-222ENST00000514552 SFRP5Q5T4F7 317 aa9.08□□□□□ -0.96
PDE4D-222ENST00000514552 CCDC81Q6ZN84 652 aa9.08□□□□□ -0.96
PDE4D-222ENST00000514552 C22orf34Q6ZV56 151 aa9.08□□□□□ -0.96
PDE4D-222ENST00000514552 BAHD1Q8TBE0 780 aaPredicted RBP9.08□□□□□ -0.96
PDE4D-222ENST00000514552 CPLX3Q8WVH0 158 aa9.08□□□□□ -0.96
PDE4D-222ENST00000514552 GMLQ99445 158 aa9.08□□□□□ -0.96
PDE4D-222ENST00000514552 SLC52A2Q9HAB3 445 aa9.08□□□□□ -0.96
PDE4D-222ENST00000514552 KCPQ6ZWJ8 1503 aa9.08□□□□□ -0.96
PDE4D-222ENST00000514552 KIF7Q2M1P5 1343 aa9.07□□□□□ -0.96
PDE4D-222ENST00000514552 N4BP2Q86UW6 1770 aaPredicted RBP9.07□□□□□ -0.96
PDE4D-222ENST00000514552 HSPA6P17066 643 aa9.07□□□□□ -0.96
PDE4D-222ENST00000514552 HOXA10P31260 410 aaPredicted RBP9.07□□□□□ -0.96
PDE4D-222ENST00000514552 GBP1P32455 592 aa9.07□□□□□ -0.96
PDE4D-222ENST00000514552 OXCT1P55809 520 aa9.07□□□□□ -0.96
PDE4D-222ENST00000514552 SMIM5Q71RC9 77 aa9.07□□□□□ -0.96
PDE4D-222ENST00000514552 NRXN2Q9P2S2 1712 aa9.07□□□□□ -0.96
PDE4D-222ENST00000514552 COL3A1P02461 1466 aaPredicted RBP9.07□□□□□ -0.96
PDE4D-222ENST00000514552 GNAT3A8MTJ3 354 aa9.06□□□□□ -0.96
PDE4D-222ENST00000514552 CD97P48960 835 aa9.06□□□□□ -0.96
PDE4D-222ENST00000514552 ZMYM1Q5SVZ6 1142 aa9.06□□□□□ -0.96
PDE4D-222ENST00000514552 ARHGAP27Q6ZUM4 889 aa9.06□□□□□ -0.96
PDE4D-222ENST00000514552 LSRQ86X29 649 aaPredicted RBP9.06□□□□□ -0.96
PDE4D-222ENST00000514552 SHDQ96IW2 340 aa9.06□□□□□ -0.96
PDE4D-222ENST00000514552 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.06□□□□□ -0.96
PDE4D-222ENST00000514552 SOS1Q07889 1333 aaPredicted RBP9.05□□□□□ -0.96
PDE4D-222ENST00000514552 DLEC1Q9Y238 1755 aa9.05□□□□□ -0.96
PDE4D-222ENST00000514552 COL15A1P39059 1388 aa9.05□□□□□ -0.96
PDE4D-222ENST00000514552 UBOX5O94941 541 aa9.05□□□□□ -0.96
PDE4D-222ENST00000514552 FGRP09769 529 aa9.05□□□□□ -0.96
PDE4D-222ENST00000514552 ZNF865P0CJ78 1059 aaPredicted RBP9.05□□□□□ -0.96
PDE4D-222ENST00000514552 DPEP1P16444 411 aa9.05□□□□□ -0.96
PDE4D-222ENST00000514552 DNAJA1P31689 397 aaKnown RBP9.05□□□□□ -0.96
PDE4D-222ENST00000514552 KIR3DL1P43629 444 aa9.05□□□□□ -0.96
PDE4D-222ENST00000514552 MSMPQ1L6U9 139 aa9.05□□□□□ -0.96
PDE4D-222ENST00000514552 FAM181AQ8N9Y4 354 aa9.05□□□□□ -0.96
PDE4D-222ENST00000514552 RNF141Q8WVD5 230 aa9.05□□□□□ -0.96
PDE4D-222ENST00000514552 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.05□□□□□ -0.96
PDE4D-222ENST00000514552 ZC3H7BQ9UGR2 993 aaKnown RBP9.05□□□□□ -0.96
PDE4D-222ENST00000514552 VIRMAQ69YN4 1812 aaKnown RBP9.05□□□□□ -0.96
PDE4D-222ENST00000514552 A0A0G2JLW4 131 aa9.04□□□□□ -0.96
PDE4D-222ENST00000514552 KIAA1324LA8MWY0 1029 aaPredicted RBP9.04□□□□□ -0.96
PDE4D-222ENST00000514552 POLRMTO00411 1230 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms