RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 TAPT1Q6NXT6 567 aa14.29□□□□□ -0.12
COPB2-212ENST00000514508 HEATR3Q7Z4Q2 680 aa14.29□□□□□ -0.12
COPB2-212ENST00000514508 RNF180Q86T96 592 aa14.29□□□□□ -0.12
COPB2-212ENST00000514508 SPC25Q9HBM1 224 aa14.29□□□□□ -0.12
COPB2-212ENST00000514508 PXMP2Q9NR77 195 aa14.29□□□□□ -0.12
COPB2-212ENST00000514508 PDGFCQ9NRA1 345 aa14.29□□□□□ -0.12
COPB2-212ENST00000514508 RBM47A0AV96 593 aaKnown RBP14.28□□□□□ -0.12
COPB2-212ENST00000514508 KBTBD13C9JR72 458 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 ADCY6O43306 1168 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 PRPF3O43395 683 aaKnown RBP14.28□□□□□ -0.12
COPB2-212ENST00000514508 ADAMTS4O75173 837 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 PGK1P00558 417 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 NR3C2P08235 984 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 EIF2AK2P19525 551 aaKnown RBP14.28□□□□□ -0.12
COPB2-212ENST00000514508 CCT2P78371 535 aaKnown RBP14.28□□□□□ -0.12
COPB2-212ENST00000514508 AKAP17AQ02040 695 aaKnown RBP14.28□□□□□ -0.12
COPB2-212ENST00000514508 STXBP2Q15833 593 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 NTRK3Q16288 839 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 GJC2Q5T442 439 aaPredicted RBP14.28□□□□□ -0.12
COPB2-212ENST00000514508 PPP1R18Q6NYC8 613 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 NOL8Q76FK4 1167 aaKnown RBP14.28□□□□□ -0.12
COPB2-212ENST00000514508 FCHSD1Q86WN1 690 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 TEX2Q8IWB9 1127 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 SMARCC2Q8TAQ2 1214 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 SCFD2Q8WU76 684 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 GPKOWQ92917 476 aaPredicted RBP eCLIP14.28□□□□□ -0.122e-8■■■■□ 20.3
COPB2-212ENST00000514508 LENG1Q96BZ8 264 aaPredicted RBP14.28□□□□□ -0.12
COPB2-212ENST00000514508 PSTPIP2Q9H939 334 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 SYNRGQ9UMZ2 1314 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 Q9Y3F1 56 aa14.28□□□□□ -0.12
COPB2-212ENST00000514508 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.27□□□□□ -0.13
COPB2-212ENST00000514508 MEIS2O14770 477 aa14.27□□□□□ -0.13
COPB2-212ENST00000514508 EIF3JO75822 258 aaKnown RBP14.27□□□□□ -0.13
COPB2-212ENST00000514508 MYCNP04198 464 aaPredicted RBP14.27□□□□□ -0.13
COPB2-212ENST00000514508 IFNAR1P17181 557 aa14.27□□□□□ -0.13
COPB2-212ENST00000514508 SMPD1P17405 629 aa14.27□□□□□ -0.13
COPB2-212ENST00000514508 NEK4P51957 841 aa14.27□□□□□ -0.13
COPB2-212ENST00000514508 AK2P54819 239 aa14.27□□□□□ -0.13
COPB2-212ENST00000514508 NAPAP54920 295 aa14.27□□□□□ -0.13
COPB2-212ENST00000514508 GJA9P57773 515 aa14.27□□□□□ -0.13
COPB2-212ENST00000514508 PFKFB3Q16875 520 aaPredicted RBP14.27□□□□□ -0.13
COPB2-212ENST00000514508 WWC2Q6AWC2 1192 aa14.27□□□□□ -0.13
COPB2-212ENST00000514508 CPLX2Q6PUV4 134 aaKnown RBP14.27□□□□□ -0.13
COPB2-212ENST00000514508 KLHDC9Q8NEP7 349 aa14.27□□□□□ -0.13
COPB2-212ENST00000514508 PDCD2LQ9BRP1 358 aa14.27□□□□□ -0.13
COPB2-212ENST00000514508 LARP6Q9BRS8 491 aaKnown RBP14.27□□□□□ -0.13
COPB2-212ENST00000514508 TSEN34Q9BSV6 310 aaKnown RBP14.27□□□□□ -0.13
COPB2-212ENST00000514508 RNF26Q9BY78 433 aaPredicted RBP14.27□□□□□ -0.13
COPB2-212ENST00000514508 C22orf23Q9BZE7 217 aa14.27□□□□□ -0.13
COPB2-212ENST00000514508 WDR11Q9BZH6 1224 aa14.27□□□□□ -0.13
COPB2-212ENST00000514508 UPF3AQ9H1J1 476 aaKnown RBP14.27□□□□□ -0.13
COPB2-212ENST00000514508 UPF2Q9HAU5 1272 aaKnown RBP14.27□□□□□ -0.13
COPB2-212ENST00000514508 BARHL2Q9NY43 387 aa14.27□□□□□ -0.13
COPB2-212ENST00000514508 GNEQ9Y223 722 aaKnown RBP14.27□□□□□ -0.13
COPB2-212ENST00000514508 ALPK3Q96L96 1907 aa14.27□□□□□ -0.13
COPB2-212ENST00000514508 FRMPD4Q14CM0 1322 aa14.26□□□□□ -0.13
COPB2-212ENST00000514508 CPLX1O14810 134 aa14.26□□□□□ -0.13
COPB2-212ENST00000514508 NKRFO15226 690 aaKnown RBP eCLIP14.26□□□□□ -0.13
COPB2-212ENST00000514508 C6orf222P0C671 652 aaPredicted RBP14.26□□□□□ -0.13
COPB2-212ENST00000514508 SCG2P13521 617 aa14.26□□□□□ -0.13
COPB2-212ENST00000514508 CST5P28325 142 aaPredicted RBP14.26□□□□□ -0.13
COPB2-212ENST00000514508 NKX3-2P78367 333 aa14.26□□□□□ -0.13
COPB2-212ENST00000514508 TTLL4Q14679 1199 aa14.26□□□□□ -0.13
COPB2-212ENST00000514508 PGM5Q15124 567 aa14.26□□□□□ -0.13
COPB2-212ENST00000514508 DUSP28Q4G0W2 176 aa14.26□□□□□ -0.13
COPB2-212ENST00000514508 USP17L6PQ6QN14 398 aa14.26□□□□□ -0.13
COPB2-212ENST00000514508 PCSK9Q8NBP7 692 aaKnown RBP14.26□□□□□ -0.13
COPB2-212ENST00000514508 DPF3Q92784 378 aa14.26□□□□□ -0.13
COPB2-212ENST00000514508 PHKBQ93100 1093 aa14.26□□□□□ -0.13
COPB2-212ENST00000514508 SENP6Q9GZR1 1112 aaPredicted RBP14.26□□□□□ -0.13
COPB2-212ENST00000514508 AP5M1Q9H0R1 490 aa14.26□□□□□ -0.13
COPB2-212ENST00000514508 GLT8D2Q9H1C3 349 aa14.26□□□□□ -0.13
COPB2-212ENST00000514508 NCOA5Q9HCD5 579 aaKnown RBP14.26□□□□□ -0.13
COPB2-212ENST00000514508 TPCN1Q9ULQ1 816 aa14.26□□□□□ -0.13
COPB2-212ENST00000514508 PHF24Q9UPV7 400 aa14.26□□□□□ -0.13
COPB2-212ENST00000514508 MKI67P46013 3256 aaKnown RBP14.25□□□□□ -0.13
COPB2-212ENST00000514508 STXBP3O00186 592 aa14.25□□□□□ -0.13
COPB2-212ENST00000514508 PFKFB2O60825 505 aa14.25□□□□□ -0.13
COPB2-212ENST00000514508 MYCLP12524 364 aaPredicted RBP14.25□□□□□ -0.13
COPB2-212ENST00000514508 CCND2P30279 289 aa14.25□□□□□ -0.13
COPB2-212ENST00000514508 RBM25P49756 843 aaKnown RBP14.25□□□□□ -0.13
COPB2-212ENST00000514508 STK3Q13188 491 aa14.25□□□□□ -0.13
COPB2-212ENST00000514508 TYW1BQ6NUM6 668 aa14.25□□□□□ -0.13
COPB2-212ENST00000514508 SEPT14Q6ZU15 432 aa14.25□□□□□ -0.13
COPB2-212ENST00000514508 TLK2Q86UE8 772 aa14.25□□□□□ -0.13
COPB2-212ENST00000514508 VSIG10LQ86VR7 867 aa14.25□□□□□ -0.13
COPB2-212ENST00000514508 TRIM22Q8IYM9 498 aa14.25□□□□□ -0.13
COPB2-212ENST00000514508 CCDC12Q8WUD4 166 aaPredicted RBP14.25□□□□□ -0.13
COPB2-212ENST00000514508 SLC26A6Q9BXS9 759 aa14.25□□□□□ -0.13
COPB2-212ENST00000514508 SLKQ9H2G2 1235 aaPredicted RBP14.25□□□□□ -0.13
COPB2-212ENST00000514508 RIC8AQ9NPQ8 531 aa14.25□□□□□ -0.13
COPB2-212ENST00000514508 SMCO2A6NFE2 343 aa14.24□□□□□ -0.13
COPB2-212ENST00000514508 MOXD2PA6NHM9 499 aa14.24□□□□□ -0.13
COPB2-212ENST00000514508 SPDYE3A6NKU9 549 aa14.24□□□□□ -0.13
COPB2-212ENST00000514508 DYNC1LI2O43237 492 aaPredicted RBP14.24□□□□□ -0.13
COPB2-212ENST00000514508 STAM2O75886 525 aa14.24□□□□□ -0.13
COPB2-212ENST00000514508 CDKL5O76039 1030 aa14.24□□□□□ -0.13
COPB2-212ENST00000514508 TXNP10599 105 aaKnown RBP14.24□□□□□ -0.13
COPB2-212ENST00000514508 ADCY7P51828 1080 aa14.24□□□□□ -0.13
COPB2-212ENST00000514508 SSRP1Q08945 709 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms