RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ARIH2O95376 493 aa12.16□□□□□ -0.46
HMGXB3-205ENST00000514469 PSMC6P62333 389 aa12.16□□□□□ -0.46
HMGXB3-205ENST00000514469 PURAQ00577 322 aaKnown RBP12.16□□□□□ -0.46
HMGXB3-205ENST00000514469 TMEM67Q5HYA8 995 aa12.16□□□□□ -0.46
HMGXB3-205ENST00000514469 CHST3Q7LGC8 479 aa12.16□□□□□ -0.46
HMGXB3-205ENST00000514469 SKAP1Q86WV1 359 aa12.16□□□□□ -0.46
HMGXB3-205ENST00000514469 NSUN6Q8TEA1 469 aaKnown RBP12.16□□□□□ -0.46
HMGXB3-205ENST00000514469 IWS1Q96ST2 819 aa12.16□□□□□ -0.46
HMGXB3-205ENST00000514469 MTA3Q9BTC8 594 aa12.16□□□□□ -0.46
HMGXB3-205ENST00000514469 LY9Q9HBG7 655 aa12.16□□□□□ -0.46
HMGXB3-205ENST00000514469 A6NJR5 290 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 SLC27A2O14975 620 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 CYTH3O43739 400 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 B4GALT4O60513 344 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 CFBP00751 764 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 TXNP10599 105 aaKnown RBP12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 SMAD3P84022 425 aaKnown RBP12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 TTLL4Q14679 1199 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 CCDC62Q6P9F0 684 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 CATIPQ7Z7H3 387 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 HOMER1Q86YM7 354 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 SAMD3Q8N6K7 520 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 COPS5Q92905 334 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 RNPC3Q96LT9 517 aaKnown RBP12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 PIGSQ96S52 555 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 RMDN3Q96TC7 470 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 MAP3K14Q99558 947 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 PXMP2Q9NR77 195 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 MTMR10Q9NXD2 777 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 MAP3K20Q9NYL2 800 aaKnown RBP12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 PCDHA1Q9Y5I3 950 aa12.15□□□□□ -0.46
HMGXB3-205ENST00000514469 SH2B2O14492 632 aaPredicted RBP12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 PRC1O43663 620 aa12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 DDAH1O94760 285 aa12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 MYL3P08590 195 aa12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 EIF2AK2P19525 551 aaKnown RBP12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 PPIGQ13427 754 aaKnown RBP eCLIP12.14□□□□□ -0.473e-7■■■■□ 21.7
HMGXB3-205ENST00000514469 COL9A3Q14050 684 aaPredicted RBP12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 NECTIN1Q15223 517 aa12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 STXBP2Q15833 593 aa12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 BRDTQ58F21 947 aaPredicted RBP12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 ARHGEF16Q5VV41 709 aa12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 CASC1Q6TDU7 716 aa12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 ZNF654Q8IZM8 581 aa12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 TMEM199Q8N511 208 aa12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 MTG1Q9BT17 334 aaPredicted RBP12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 PPP1R12CQ9BZL4 782 aa12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 ALDH8A1Q9H2A2 487 aaPredicted RBP12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 ANO2Q9NQ90 1003 aa12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 GPHNQ9NQX3 736 aaPredicted RBP12.14□□□□□ -0.47
HMGXB3-205ENST00000514469 UMODL1Q5DID0 1318 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 PNMA6FA0A0J9YX94 578 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 CSF2RAP15509 400 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 MCM5P33992 734 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 ARHGAP1Q07960 439 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 TRAF1Q13077 416 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 RASIP1Q5U651 963 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 CREB3L3Q68CJ9 461 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 SEPT14Q6ZU15 432 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 C16orf59Q7L2K0 433 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 TMEM87BQ96K49 555 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 GUCD1Q96NT3 240 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.13□□□□□ -0.473e-7■■■□□ 16
HMGXB3-205ENST00000514469 PDCD2LQ9BRP1 358 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 MYL10Q9BUA6 226 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 NOC4LQ9BVI4 516 aaKnown RBP12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 SPZ1Q9BXG8 430 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 TRPV6Q9H1D0 765 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 HIPK3Q9H422 1215 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 STXBP5LQ9Y2K9 1186 aa12.13□□□□□ -0.47
HMGXB3-205ENST00000514469 FRMPD4Q14CM0 1322 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 MYH6P13533 1939 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 KPNA6O60684 536 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 EIF3JO75822 258 aaKnown RBP12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 GH1P01241 217 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 NR3C2P08235 984 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 MMP3P08254 477 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 HOXA13P31271 388 aaPredicted RBP12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 CYP2C18P33260 490 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 LIFRP42702 1097 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 PGM5Q15124 567 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 LY6KQ17RY6 165 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 TMEM240Q5SV17 173 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 ZNF697Q5TEC3 545 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 PSRC1Q6PGN9 363 aaPredicted RBP12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 CTCFLQ8NI51 663 aaPredicted RBP12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 EMID1Q96A84 441 aaPredicted RBP12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 WNT8AQ9H1J5 351 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 SCN10AQ9Y5Y9 1956 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 CDH23Q9H251 3354 aa12.12□□□□□ -0.47
HMGXB3-205ENST00000514469 GCOM1H8Y6P7 765 aaPredicted RBP12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 RGS20O76081 388 aa12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 POLR2MP0CAP2 368 aa12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 SMARCA1P28370 1054 aa12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 KIF5BP33176 963 aa12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 PTPN11Q06124 597 aaPredicted RBP12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 NBPF20Q3BBV1 942 aa12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 NFRKBQ6P4R8 1299 aa12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 IL31RAQ8NI17 732 aa12.11□□□□□ -0.47
HMGXB3-205ENST00000514469 AFG1LQ8WV93 481 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms