RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 XBP1P17861 261 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 PTPREP23469 700 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 GHRHRQ02643 423 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 GRB14Q14449 540 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 BECN1Q14457 450 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 KCTD2Q14681 263 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 MCF2L2Q86YR7 1114 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 TEX2Q8IWB9 1127 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 SAMD3Q8N6K7 520 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 CLEC4DQ8WXI8 215 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 DDX11Q96FC9 970 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 INTS4Q96HW7 963 aaKnown RBP8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 MMP19Q99542 508 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 GLT8D2Q9H1C3 349 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 A1CFQ9NQ94 594 aaKnown RBP8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 SH3GLB2Q9NR46 395 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 MAP3K20Q9NYL2 800 aaKnown RBP8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 SLC15A5A6NIM6 579 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 OPLAHO14841 1288 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 HSP90AA1P07900 732 aaKnown RBP8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 FDPSP14324 419 aaKnown RBP8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 HOXD10P28358 340 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 ADORA2AP29274 412 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 CTGFP29279 349 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 LBX1P52954 281 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 PRMT2P55345 433 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 MORN1Q5T089 497 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 TYW1BQ6NUM6 668 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 NSMFQ6X4W1 530 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 RNF207Q6ZRF8 634 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 ANKRD35Q8N283 1001 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 FAM184AQ8NB25 1140 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 RGS22Q8NE09 1264 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 TRIM47Q96LD4 638 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 AIFM3Q96NN9 605 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 NUDT12Q9BQG2 462 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 ALG1Q9BT22 464 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 ARHGAP39Q9C0H5 1083 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 ZMYND12Q9H0C1 365 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 SLC5A4Q9NY91 659 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 VPS54Q9P1Q0 977 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 SMC3Q9UQE7 1217 aa8.72□□□□□ -1.01
HMGXB3-204ENST00000513318 KAT6AQ92794 2004 aa8.71□□□□□ -1.01
HMGXB3-204ENST00000513318 PIK3CDO00329 1044 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 CFBP00751 764 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 GJB2P29033 226 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 GNA11P29992 359 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 ANP32AP39687 249 aaKnown RBP8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 RGS2P41220 211 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 HSD17B4P51659 736 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 ADCY7P51828 1080 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 RPS6P62753 249 aaKnown RBP8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 MAP2K5Q13163 448 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 GALNT17Q6IS24 598 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 SLC30A10Q6XR72 485 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 OTOP1Q7RTM1 612 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 BICD2Q8TD16 824 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 CUL5Q93034 780 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 APBA2Q99767 749 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 C6orf50Q9HD87 102 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 RIC8AQ9NPQ8 531 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 PRDM10Q9NQV6 1147 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 CYP39A1Q9NYL5 469 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 SRRDQ9UH36 339 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 LHX6Q9UPM6 363 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 TRIM17Q9Y577 477 aa8.71□□□□□ -1.02
HMGXB3-204ENST00000513318 DNAJC25-GNG10A0A024R161 153 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 LOC102724159A0A0B4J2E5 919 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 SMCO2A6NFE2 343 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 GCOM1H8Y6P7 765 aaPredicted RBP8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 MEIS2O14770 477 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 DTNBO60941 627 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 HOXC6P09630 235 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 POLR2MP0CAP2 368 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 CALML3P27482 149 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 FLT3LGP49771 235 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 MRPL12P52815 198 aaKnown RBP8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 EMP3P54852 163 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 NLRP5P59047 1200 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 CAP1Q01518 475 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 PRKCZQ05513 592 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 AP3B2Q13367 1082 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 IRF5Q13568 498 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 BAATQ14032 418 aaPredicted RBP8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 TRIM29Q14134 588 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 PWP2Q15269 919 aaKnown RBP8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 CTU1Q7Z7A3 348 aaKnown RBP8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 DPP9Q86TI2 863 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 REXO1Q8N1G1 1221 aaKnown RBP8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 FAM133AQ8N9E0 248 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 DAGLBQ8NCG7 672 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 DNERQ8NFT8 737 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 USP6NLQ92738 828 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 C8orf76Q96K31 380 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 PHF20Q9BVI0 1012 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 PSTPIP2Q9H939 334 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 ADD3Q9UEY8 706 aaKnown RBP8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 GJD2Q9UKL4 321 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 GABRQQ9UN88 632 aa8.7□□□□□ -1.02
HMGXB3-204ENST00000513318 DIS3Q9Y2L1 958 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms