RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 FAM160B2Q86V87 743 aa13.33□□□□□ -0.28
RNF4-218ENST00000513284 ITPRIPQ8IWB1 547 aa13.33□□□□□ -0.28
RNF4-218ENST00000513284 SIRT2Q8IXJ6 389 aa13.33□□□□□ -0.28
RNF4-218ENST00000513284 NEDD1Q8NHV4 660 aa13.33□□□□□ -0.28
RNF4-218ENST00000513284 AFAP1L1Q8TED9 768 aa13.33□□□□□ -0.28
RNF4-218ENST00000513284 MRPL38Q96DV4 380 aaKnown RBP13.33□□□□□ -0.28
RNF4-218ENST00000513284 KIF1BPQ96EK5 621 aa13.33□□□□□ -0.28
RNF4-218ENST00000513284 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.33□□□□□ -0.28
RNF4-218ENST00000513284 BCL11AQ9H165 835 aa13.33□□□□□ -0.28
RNF4-218ENST00000513284 GPHNQ9NQX3 736 aaPredicted RBP13.33□□□□□ -0.28
RNF4-218ENST00000513284 SIP14410 1827 aa13.32□□□□□ -0.28
RNF4-218ENST00000513284 ABHD14A-ACY1A0A1B0GW23 586 aa13.32□□□□□ -0.28
RNF4-218ENST00000513284 KPNA6O60684 536 aa13.32□□□□□ -0.28
RNF4-218ENST00000513284 SELPP16109 830 aa13.32□□□□□ -0.28
RNF4-218ENST00000513284 RBL2Q08999 1139 aa13.32□□□□□ -0.28
RNF4-218ENST00000513284 MBTPS1Q14703 1052 aa13.32□□□□□ -0.28
RNF4-218ENST00000513284 RCSD1Q6JBY9 416 aa13.32□□□□□ -0.28
RNF4-218ENST00000513284 GIMAP6Q6P9H5 292 aa13.32□□□□□ -0.28
RNF4-218ENST00000513284 LRRC8DQ7L1W4 858 aa13.32□□□□□ -0.28
RNF4-218ENST00000513284 KAT2BQ92831 832 aa13.32□□□□□ -0.28
RNF4-218ENST00000513284 OSBP2Q969R2 916 aa13.32□□□□□ -0.28
RNF4-218ENST00000513284 PABPC5Q96DU9 382 aaKnown RBP13.32□□□□□ -0.28
RNF4-218ENST00000513284 ALG13Q9NP73 1137 aaKnown RBP13.32□□□□□ -0.28
RNF4-218ENST00000513284 PRKAG3Q9UGI9 489 aa13.32□□□□□ -0.28
RNF4-218ENST00000513284 TECTAO75443 2155 aa13.32□□□□□ -0.28
RNF4-218ENST00000513284 NFIBO00712 420 aa13.31□□□□□ -0.28
RNF4-218ENST00000513284 ARIH2O95376 493 aa13.31□□□□□ -0.28
RNF4-218ENST00000513284 CKBP12277 381 aa13.31□□□□□ -0.28
RNF4-218ENST00000513284 HTRA4P83105 476 aaPredicted RBP13.31□□□□□ -0.28
RNF4-218ENST00000513284 HSP90AB4PQ58FF6 505 aa13.31□□□□□ -0.28
RNF4-218ENST00000513284 TCEAL5Q5H9L2 206 aa13.31□□□□□ -0.28
RNF4-218ENST00000513284 SESTD1Q86VW0 696 aa13.31□□□□□ -0.28
RNF4-218ENST00000513284 ADHFE1Q8IWW8 467 aa13.31□□□□□ -0.28
RNF4-218ENST00000513284 FBXO22Q8NEZ5 403 aa13.31□□□□□ -0.28
RNF4-218ENST00000513284 CAGE1Q8TC20 777 aa13.31□□□□□ -0.28
RNF4-218ENST00000513284 SP7Q8TDD2 431 aaPredicted RBP13.31□□□□□ -0.28
RNF4-218ENST00000513284 CLEC4DQ8WXI8 215 aa13.31□□□□□ -0.28
RNF4-218ENST00000513284 WNT8BQ93098 351 aa13.31□□□□□ -0.28
RNF4-218ENST00000513284 MFSD14AQ96MC6 490 aa13.31□□□□□ -0.28
RNF4-218ENST00000513284 ST18O60284 1047 aa13.3□□□□□ -0.28
RNF4-218ENST00000513284 EDNRBP24530 442 aa13.3□□□□□ -0.28
RNF4-218ENST00000513284 SLC1A4P43007 532 aa13.3□□□□□ -0.28
RNF4-218ENST00000513284 TFAP4Q01664 338 aa13.3□□□□□ -0.28
RNF4-218ENST00000513284 DLX2Q07687 328 aaPredicted RBP13.3□□□□□ -0.28
RNF4-218ENST00000513284 TCF15Q12870 199 aa13.3□□□□□ -0.28
RNF4-218ENST00000513284 TRIM71Q2Q1W2 868 aaKnown RBP13.3□□□□□ -0.28
RNF4-218ENST00000513284 EPC2Q52LR7 807 aa13.3□□□□□ -0.28
RNF4-218ENST00000513284 HERC4Q5GLZ8 1057 aaPredicted RBP13.3□□□□□ -0.28
RNF4-218ENST00000513284 TTBK2Q6IQ55 1244 aa13.3□□□□□ -0.28
RNF4-218ENST00000513284 CCDC62Q6P9F0 684 aa13.3□□□□□ -0.28
RNF4-218ENST00000513284 BANK1Q8NDB2 785 aa13.3□□□□□ -0.28
RNF4-218ENST00000513284 IL17RBQ9NRM6 502 aa13.3□□□□□ -0.28
RNF4-218ENST00000513284 ADD3Q9UEY8 706 aaKnown RBP13.3□□□□□ -0.28
RNF4-218ENST00000513284 MUTYHQ9UIF7 546 aa13.3□□□□□ -0.28
RNF4-218ENST00000513284 CCPG1Q9ULG6 757 aa13.3□□□□□ -0.28
RNF4-218ENST00000513284 NOD1Q9Y239 953 aa13.3□□□□□ -0.28
RNF4-218ENST00000513284 MYO7AQ13402 2215 aa13.29□□□□□ -0.28
RNF4-218ENST00000513284 LOC102724159A0A0B4J2E5 919 aa13.29□□□□□ -0.28
RNF4-218ENST00000513284 H3BNC9 293 aa13.29□□□□□ -0.28
RNF4-218ENST00000513284 NKRFO15226 690 aaKnown RBP eCLIP13.29□□□□□ -0.28
RNF4-218ENST00000513284 ICAM1P05362 532 aa13.29□□□□□ -0.28
RNF4-218ENST00000513284 CHMP4BP1P59074 171 aa13.29□□□□□ -0.28
RNF4-218ENST00000513284 IKQ13123 557 aaPredicted RBP13.29□□□□□ -0.28
RNF4-218ENST00000513284 IKBKEQ14164 716 aa13.29□□□□□ -0.28
RNF4-218ENST00000513284 HIC1Q14526 733 aa13.29□□□□□ -0.28
RNF4-218ENST00000513284 PWP2Q15269 919 aaKnown RBP13.29□□□□□ -0.28
RNF4-218ENST00000513284 SLC30A10Q6XR72 485 aa13.29□□□□□ -0.28
RNF4-218ENST00000513284 BMP8AQ7Z5Y6 402 aa13.29□□□□□ -0.28
RNF4-218ENST00000513284 FTSJ3Q8IY81 847 aaKnown RBP13.29□□□□□ -0.28
RNF4-218ENST00000513284 RANBP17Q9H2T7 1088 aaKnown RBP13.29□□□□□ -0.28
RNF4-218ENST00000513284 INCENPQ9NQS7 918 aa13.29□□□□□ -0.28
RNF4-218ENST00000513284 INSL6Q9Y581 213 aa13.29□□□□□ -0.28
RNF4-218ENST00000513284 PLIN4Q96Q06 1357 aa13.29□□□□□ -0.28
RNF4-218ENST00000513284 NMT2O60551 498 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 TSPY3P0CV98 308 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 TSPY8P0CW00 308 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 TXNP10599 105 aaKnown RBP13.28□□□□□ -0.28
RNF4-218ENST00000513284 SLC16A2P36021 539 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 PPP2R5BQ15173 497 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 CTC1Q2NKJ3 1217 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 ZNF618Q5T7W0 954 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 RNF135Q8IUD6 432 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 SCFD2Q8WU76 684 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 AFG1LQ8WV93 481 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 EDAQ92838 391 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 OSBPL7Q9BZF2 842 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 HDAC6Q9UBN7 1215 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 CTNNA3Q9UI47 895 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 ISY1Q9ULR0 285 aaKnown RBP13.28□□□□□ -0.28
RNF4-218ENST00000513284 MYH7P12883 1935 aa13.28□□□□□ -0.28
RNF4-218ENST00000513284 ZFHX2Q9C0A1 2572 aaPredicted RBP13.27□□□□□ -0.28
RNF4-218ENST00000513284 M0R2C6 588 aa13.27□□□□□ -0.29
RNF4-218ENST00000513284 LGR5O75473 907 aa13.27□□□□□ -0.29
RNF4-218ENST00000513284 PARNO95453 639 aaKnown RBP13.27□□□□□ -0.29
RNF4-218ENST00000513284 CALML3P27482 149 aa13.27□□□□□ -0.29
RNF4-218ENST00000513284 NOVP48745 357 aa13.27□□□□□ -0.29
RNF4-218ENST00000513284 ZNF200P98182 395 aaPredicted RBP13.27□□□□□ -0.29
RNF4-218ENST00000513284 GPM6BQ13491 265 aa13.27□□□□□ -0.29
RNF4-218ENST00000513284 SMAD2Q15796 467 aaKnown RBP13.27□□□□□ -0.29
RNF4-218ENST00000513284 BRDTQ58F21 947 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms