RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 MYSM1Q5VVJ2 828 aa14.31□□□□□ -0.12
PDPN-210ENST00000513143 PLEKHH3Q7Z736 793 aa14.31□□□□□ -0.12
PDPN-210ENST00000513143 PGBD1Q96JS3 809 aa14.31□□□□□ -0.12
PDPN-210ENST00000513143 ATP6V1DQ9Y5K8 247 aa14.31□□□□□ -0.12
PDPN-210ENST00000513143 RPTORQ8N122 1335 aa14.31□□□□□ -0.12
PDPN-210ENST00000513143 PTPREP23469 700 aa14.3□□□□□ -0.12
PDPN-210ENST00000513143 SREBF1P36956 1147 aa14.3□□□□□ -0.12
PDPN-210ENST00000513143 TRAPPC10P48553 1259 aa14.3□□□□□ -0.12
PDPN-210ENST00000513143 TOB1P50616 345 aaPredicted RBP14.3□□□□□ -0.12
PDPN-210ENST00000513143 GRB14Q14449 540 aa14.3□□□□□ -0.12
PDPN-210ENST00000513143 INF2Q27J81 1249 aa14.3□□□□□ -0.12
PDPN-210ENST00000513143 RILPL1Q5EBL4 403 aa14.3□□□□□ -0.12
PDPN-210ENST00000513143 FAM173BQ6P4H8 233 aa14.3□□□□□ -0.12
PDPN-210ENST00000513143 FAM133AQ8N9E0 248 aa14.3□□□□□ -0.12
PDPN-210ENST00000513143 TBCKQ8TEA7 893 aa14.3□□□□□ -0.12
PDPN-210ENST00000513143 CRYGNQ8WXF5 182 aa14.3□□□□□ -0.12
PDPN-210ENST00000513143 TAAR1Q96RJ0 339 aa14.3□□□□□ -0.12
PDPN-210ENST00000513143 EHMT1Q9H9B1 1298 aa14.3□□□□□ -0.12
PDPN-210ENST00000513143 IVNS1ABPQ9Y6Y0 642 aa14.3□□□□□ -0.12
PDPN-210ENST00000513143 FRMPD4Q14CM0 1322 aa14.3□□□□□ -0.12
PDPN-210ENST00000513143 SLC15A5A6NIM6 579 aa14.29□□□□□ -0.12
PDPN-210ENST00000513143 POTEB2H3BUK9 544 aa14.29□□□□□ -0.12
PDPN-210ENST00000513143 EDIL3O43854 480 aa14.29□□□□□ -0.12
PDPN-210ENST00000513143 LACTBP83111 547 aaPredicted RBP14.29□□□□□ -0.12
PDPN-210ENST00000513143 CNTN2Q02246 1040 aa14.29□□□□□ -0.12
PDPN-210ENST00000513143 SP3Q02447 781 aa14.29□□□□□ -0.12
PDPN-210ENST00000513143 NEK8Q86SG6 692 aa14.29□□□□□ -0.12
PDPN-210ENST00000513143 DNERQ8NFT8 737 aa14.29□□□□□ -0.12
PDPN-210ENST00000513143 TNPO1Q92973 898 aaKnown RBP14.29□□□□□ -0.12
PDPN-210ENST00000513143 PURBQ96QR8 312 aaKnown RBP14.29□□□□□ -0.12
PDPN-210ENST00000513143 RMDN3Q96TC7 470 aa14.29□□□□□ -0.12
PDPN-210ENST00000513143 PXMP2Q9NR77 195 aa14.29□□□□□ -0.12
PDPN-210ENST00000513143 NOL7Q9UMY1 257 aaKnown RBP14.29□□□□□ -0.12
PDPN-210ENST00000513143 CYP3A4P08684 503 aa14.28□□□□□ -0.12
PDPN-210ENST00000513143 ADORA2AP29274 412 aa14.28□□□□□ -0.12
PDPN-210ENST00000513143 CTGFP29279 349 aa14.28□□□□□ -0.12
PDPN-210ENST00000513143 USP11P51784 963 aa14.28□□□□□ -0.12
PDPN-210ENST00000513143 ARHGAP4P98171 946 aa14.28□□□□□ -0.12
PDPN-210ENST00000513143 MORN1Q5T089 497 aa14.28□□□□□ -0.12
PDPN-210ENST00000513143 ARHGEF16Q5VV41 709 aa14.28□□□□□ -0.12
PDPN-210ENST00000513143 ATL3Q6DD88 541 aa14.28□□□□□ -0.12
PDPN-210ENST00000513143 NSUN6Q8TEA1 469 aaKnown RBP14.28□□□□□ -0.12
PDPN-210ENST00000513143 PDCD2LQ9BRP1 358 aa14.28□□□□□ -0.12
PDPN-210ENST00000513143 WBP1LQ9NX94 342 aa14.28□□□□□ -0.12
PDPN-210ENST00000513143 CEP350Q5VT06 3117 aa14.28□□□□□ -0.12
PDPN-210ENST00000513143 ZSWIM8A7E2V4 1837 aa14.28□□□□□ -0.12
PDPN-210ENST00000513143 SOWAHBA6NEL2 793 aa14.27□□□□□ -0.12
PDPN-210ENST00000513143 GPR25O00155 361 aa14.27□□□□□ -0.12
PDPN-210ENST00000513143 COBLO75128 1261 aa14.27□□□□□ -0.12
PDPN-210ENST00000513143 PGK2P07205 417 aa14.27□□□□□ -0.12
PDPN-210ENST00000513143 EIF2AK2P19525 551 aaKnown RBP14.27□□□□□ -0.12
PDPN-210ENST00000513143 FCGRTP55899 365 aa14.27□□□□□ -0.12
PDPN-210ENST00000513143 DNM1Q05193 864 aaKnown RBP14.27□□□□□ -0.12
PDPN-210ENST00000513143 PGM5Q15124 567 aa14.27□□□□□ -0.12
PDPN-210ENST00000513143 ZNF792Q3KQV3 632 aa14.27□□□□□ -0.12
PDPN-210ENST00000513143 FOXD4L6Q3SYB3 417 aaPredicted RBP14.27□□□□□ -0.12
PDPN-210ENST00000513143 FOXD4L3Q6VB84 417 aaPredicted RBP14.27□□□□□ -0.12
PDPN-210ENST00000513143 CLEC17AQ6ZS10 378 aa14.27□□□□□ -0.12
PDPN-210ENST00000513143 FGD4Q96M96 766 aa14.27□□□□□ -0.12
PDPN-210ENST00000513143 ZNF396Q96N95 335 aaPredicted RBP14.27□□□□□ -0.12
PDPN-210ENST00000513143 IWS1Q96ST2 819 aa14.27□□□□□ -0.12
PDPN-210ENST00000513143 BEGAINQ9BUH8 593 aa14.27□□□□□ -0.12
PDPN-210ENST00000513143 ADD3Q9UEY8 706 aaKnown RBP14.27□□□□□ -0.12
PDPN-210ENST00000513143 DIS3Q9Y2L1 958 aaKnown RBP14.27□□□□□ -0.12
PDPN-210ENST00000513143 ASTN1O14525 1302 aa14.27□□□□□ -0.13
PDPN-210ENST00000513143 MCM3APO60318 1980 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 CYP3A7-CYP3A51PA0A087WV96 503 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 LOC102724159A0A0B4J2E5 919 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 WNT7AO00755 349 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 TNPO2O14787 897 aaKnown RBP14.26□□□□□ -0.13
PDPN-210ENST00000513143 ATP2B1P20020 1258 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 CYP3A7P24462 503 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 CIITAP33076 1130 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 PSMC4P43686 418 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 ALDH5A1P51649 535 aaPredicted RBP14.26□□□□□ -0.13
PDPN-210ENST00000513143 NBR1Q14596 966 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 KIF22Q14807 665 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 PWP2Q15269 919 aaKnown RBP14.26□□□□□ -0.13
PDPN-210ENST00000513143 LETM2Q2VYF4 491 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 TTC38Q5R3I4 469 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 PCNX4Q63HM2 1172 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 PPP4R3AQ6IN85 833 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 XRRA1Q6P2D8 792 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 MOXD1Q6UVY6 613 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 VSIG10LQ86VR7 867 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 USP6NLQ92738 828 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 CHAMP1Q96JM3 812 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 TRIM47Q96LD4 638 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 USP28Q96RU2 1077 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 NAP1L4Q99733 375 aaKnown RBP14.26□□□□□ -0.13
PDPN-210ENST00000513143 ARHGAP39Q9C0H5 1083 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.26□□□□□ -0.13
PDPN-210ENST00000513143 GJD2Q9UKL4 321 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 PCDHB6Q9Y5E3 794 aa14.26□□□□□ -0.13
PDPN-210ENST00000513143 LRRC37A2A6NM11 1700 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 ECM2O94769 699 aaPredicted RBP14.25□□□□□ -0.13
PDPN-210ENST00000513143 NR3C2P08235 984 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 GCFC2P16383 781 aaKnown RBP14.25□□□□□ -0.13
PDPN-210ENST00000513143 EDNRBP24530 442 aa14.25□□□□□ -0.13
PDPN-210ENST00000513143 UBXN2AP68543 259 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms