RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 IFNAR1P17181 557 aa8.58□□□□□ -1.04
NR1I3-231ENST00000512340 CCND2P30279 289 aa8.58□□□□□ -1.04
NR1I3-231ENST00000512340 RBM25P49756 843 aaKnown RBP8.58□□□□□ -1.04
NR1I3-231ENST00000512340 ALDH5A1P51649 535 aaPredicted RBP8.58□□□□□ -1.04
NR1I3-231ENST00000512340 CNTN2Q02246 1040 aa8.58□□□□□ -1.04
NR1I3-231ENST00000512340 TRIM29Q14134 588 aa8.58□□□□□ -1.04
NR1I3-231ENST00000512340 TTLL4Q14679 1199 aa8.58□□□□□ -1.04
NR1I3-231ENST00000512340 GNPTABQ3T906 1256 aa8.58□□□□□ -1.04
NR1I3-231ENST00000512340 NECAB2Q7Z6G3 386 aa8.58□□□□□ -1.04
NR1I3-231ENST00000512340 FCHSD1Q86WN1 690 aa8.58□□□□□ -1.04
NR1I3-231ENST00000512340 RAB11FIP4Q86YS3 637 aa8.58□□□□□ -1.04
NR1I3-231ENST00000512340 PCSK9Q8NBP7 692 aaKnown RBP8.58□□□□□ -1.04
NR1I3-231ENST00000512340 SCFD2Q8WU76 684 aa8.58□□□□□ -1.04
NR1I3-231ENST00000512340 SH2B1Q9NRF2 756 aaPredicted RBP8.58□□□□□ -1.04
NR1I3-231ENST00000512340 LIMCH1Q9UPQ0 1083 aa8.58□□□□□ -1.04
NR1I3-231ENST00000512340 NID2Q14112 1375 aa8.58□□□□□ -1.04
NR1I3-231ENST00000512340 PIK3CDO00329 1044 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 CYTH3O43739 400 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 DUSP11O75319 330 aaKnown RBP8.57□□□□□ -1.04
NR1I3-231ENST00000512340 EIF3JO75822 258 aaKnown RBP8.57□□□□□ -1.04
NR1I3-231ENST00000512340 DEXIO95424 95 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 MYCNP04198 464 aaPredicted RBP8.57□□□□□ -1.04
NR1I3-231ENST00000512340 ADD1P35611 737 aaKnown RBP8.57□□□□□ -1.04
NR1I3-231ENST00000512340 HSD17B4P51659 736 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 CCT2P78371 535 aaKnown RBP8.57□□□□□ -1.04
NR1I3-231ENST00000512340 GHRHRQ02643 423 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 TNFAIP2Q03169 654 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 STK3Q13188 491 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 TOB2Q14106 344 aaPredicted RBP8.57□□□□□ -1.04
NR1I3-231ENST00000512340 PFKFB3Q16875 520 aaPredicted RBP8.57□□□□□ -1.04
NR1I3-231ENST00000512340 GALNT17Q6IS24 598 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 SLC30A10Q6XR72 485 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 NLRX1Q86UT6 975 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 SYTL5Q8TDW5 730 aaPredicted RBP8.57□□□□□ -1.04
NR1I3-231ENST00000512340 CDHR1Q96JP9 859 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 SLC26A6Q9BXS9 759 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 SEZ6LQ9BYH1 1024 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 BRMS1Q9HCU9 246 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 XPNPEP3Q9NQH7 507 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 SH3GLB2Q9NR46 395 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 BARHL2Q9NY43 387 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 FLRT1Q9NZU1 646 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 Q9Y3F1 56 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 ZSWIM8A7E2V4 1837 aa8.57□□□□□ -1.04
NR1I3-231ENST00000512340 CNTNAP5Q8WYK1 1306 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 PLXNA1Q9UIW2 1896 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 SOWAHBA6NEL2 793 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 SMCO2A6NFE2 343 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 KPNA6O60684 536 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 PFKFB2O60825 505 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 NR3C2P08235 984 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 TGFB3P10600 412 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 EIF2AK2P19525 551 aaKnown RBP8.56□□□□□ -1.04
NR1I3-231ENST00000512340 EN2P19622 333 aaPredicted RBP8.56□□□□□ -1.04
NR1I3-231ENST00000512340 CCND3P30281 292 aaPredicted RBP8.56□□□□□ -1.04
NR1I3-231ENST00000512340 AK2P54819 239 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 AP3B2Q13367 1082 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 CCDC144BQ3MJ40 725 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 CMTR1Q8N1G2 835 aaKnown RBP8.56□□□□□ -1.04
NR1I3-231ENST00000512340 GIMAP8Q8ND71 665 aaPredicted RBP8.56□□□□□ -1.04
NR1I3-231ENST00000512340 MORC4Q8TE76 937 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 TSEN34Q9BSV6 310 aaKnown RBP8.56□□□□□ -1.04
NR1I3-231ENST00000512340 CRISPLD2Q9H0B8 497 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 PXMP2Q9NR77 195 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 TCEAL9Q9UHQ7 104 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 OGDHLQ9ULD0 1010 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 COLQQ9Y215 455 aaPredicted RBP8.56□□□□□ -1.04
NR1I3-231ENST00000512340 NR2E3Q9Y5X4 410 aa8.56□□□□□ -1.04
NR1I3-231ENST00000512340 A0A1W2PPC1 479 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 ESYT2A0FGR8 921 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 MOXD2PA6NHM9 499 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 DNM1LO00429 736 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 CABYRO75952 493 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 SEC24BO95487 1268 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 SNAI1O95863 264 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-231ENST00000512340 ZNF865P0CJ78 1059 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-231ENST00000512340 MYCLP12524 364 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-231ENST00000512340 CDC27P30260 824 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 HOXA13P31271 388 aaPredicted RBP8.55□□□□□ -1.04
NR1I3-231ENST00000512340 ZNF76P36508 570 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 CPT1AP50416 773 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 NLRP5P59047 1200 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 TRIM32Q13049 653 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 PRAMEF19Q5SWL8 479 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 REXO1Q8N1G1 1221 aaKnown RBP8.55□□□□□ -1.04
NR1I3-231ENST00000512340 FAM184AQ8NB25 1140 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 VTI1AQ96AJ9 217 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 TAAR1Q96RJ0 339 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 PDCD2LQ9BRP1 358 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 LLPHQ9BRT6 129 aaKnown RBP8.55□□□□□ -1.04
NR1I3-231ENST00000512340 WDR11Q9BZH6 1224 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 C11orf49Q9H6J7 331 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 RIC8AQ9NPQ8 531 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 TSHZ2Q9NRE2 1034 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 CUL9Q8IWT3 2517 aa8.55□□□□□ -1.04
NR1I3-231ENST00000512340 STK36Q9NRP7 1315 aa8.54□□□□□ -1.04
NR1I3-231ENST00000512340 hCG_1642624A0A1W2PR95 340 aa8.54□□□□□ -1.04
NR1I3-231ENST00000512340 STXBP3O00186 592 aa8.54□□□□□ -1.04
NR1I3-231ENST00000512340 MAFGO15525 162 aa8.54□□□□□ -1.04
NR1I3-231ENST00000512340 PPP1R11O60927 126 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms