RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 NECTIN1Q15223 517 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 RRP12Q5JTH9 1297 aaKnown RBP11.11□□□□□ -0.63
SNF8-211ENST00000512243 NOL9Q5SY16 702 aaKnown RBP11.11□□□□□ -0.63
SNF8-211ENST00000512243 CST9Q5W186 159 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 TATDN1Q6P1N9 297 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 MOB2Q70IA6 237 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 ANKRD13AQ8IZ07 590 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 USP26Q9BXU7 913 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 CNNM2Q9H8M5 875 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 PICK1Q9NRD5 415 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 MARK1Q9P0L2 795 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 ZNF112Q9UJU3 913 aa11.11□□□□□ -0.63
SNF8-211ENST00000512243 ABT1Q9ULW3 272 aaKnown RBP11.11□□□□□ -0.63
SNF8-211ENST00000512243 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
SNF8-211ENST00000512243 NEDD4P46934 1319 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 UNCXA6NJT0 531 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 UBE2Q2LH0YL09 131 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 PRDM1O75626 825 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 EPXP11678 715 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 HSPA4P34932 840 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 CAP2P40123 477 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 NT5C2P49902 561 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 HUNKP57058 714 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 PCBP4P57723 403 aaKnown RBP11.1□□□□□ -0.63
SNF8-211ENST00000512243 VGLL4Q14135 290 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 KRT32Q14532 448 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 GRIN2CQ14957 1233 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 ABCB5Q2M3G0 1257 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 RALYLQ86SE5 291 aaKnown RBP11.1□□□□□ -0.63
SNF8-211ENST00000512243 SCYL3Q8IZE3 742 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 ZNF444Q8N0Y2 327 aaPredicted RBP11.1□□□□□ -0.63
SNF8-211ENST00000512243 CCDC17Q96LX7 622 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 HINFPQ9BQA5 517 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 KRT23Q9C075 422 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 VRTNQ9H8Y1 702 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 CABP5Q9NP86 173 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 GINM1Q9NU53 330 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 KLF15Q9UIH9 416 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 PLIN4Q96Q06 1357 aa11.1□□□□□ -0.63
SNF8-211ENST00000512243 TSPY2A6NKD2 308 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 E7EWF7 191 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 RANBP6O60518 1105 aaKnown RBP11.09□□□□□ -0.63
SNF8-211ENST00000512243 GH2P01242 217 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 ASNSP08243 561 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 FGRP09769 529 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 TSPY3P0CV98 308 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 TSPY8P0CW00 308 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 AKR1B1P15121 316 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 TMEM179Q6ZVK1 233 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 ESR2Q92731 530 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 ZKSCAN4Q969J2 545 aaPredicted RBP11.09□□□□□ -0.63
SNF8-211ENST00000512243 BACH2Q9BYV9 841 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 ZBTB21Q9ULJ3 1066 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 PRR12Q9ULL5 1215 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 TACC3Q9Y6A5 838 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 SNCAIPQ9Y6H5 919 aa11.09□□□□□ -0.63
SNF8-211ENST00000512243 B4E1Z4 1266 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 ADH6P28332 368 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 RRP1BQ14684 758 aaKnown RBP11.08□□□□□ -0.64
SNF8-211ENST00000512243 FAM47AQ5JRC9 791 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 LDLRAD1Q5T700 205 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.08□□□□□ -0.64
SNF8-211ENST00000512243 STOX1Q6ZVD7 989 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 SAPCD2Q86UD0 394 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 FCHSD1Q86WN1 690 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 ANKMY2Q8IV38 441 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 NCOA7Q8NI08 942 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 KCNB2Q92953 911 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 CLMNQ96JQ2 1002 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 ELP3Q9H9T3 547 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 INCENPQ9NQS7 918 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 SNX14Q9Y5W7 946 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 GPC6Q9Y625 555 aaPredicted RBP11.08□□□□□ -0.64
SNF8-211ENST00000512243 TAF6LQ9Y6J9 622 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 LOC285556D6RIA3 1793 aa11.08□□□□□ -0.64
SNF8-211ENST00000512243 C1QTNF8P60827 252 aa11.07□□□□□ -0.64
SNF8-211ENST00000512243 TFAP4Q01664 338 aa11.07□□□□□ -0.64
SNF8-211ENST00000512243 ICA1Q05084 483 aa11.07□□□□□ -0.64
SNF8-211ENST00000512243 SFSWAPQ12872 951 aaKnown RBP11.07□□□□□ -0.64
SNF8-211ENST00000512243 RAB3GAP1Q15042 981 aa11.07□□□□□ -0.64
SNF8-211ENST00000512243 SHROOM1Q2M3G4 852 aaPredicted RBP11.07□□□□□ -0.64
SNF8-211ENST00000512243 C1orf53Q5VUE5 145 aa11.07□□□□□ -0.64
SNF8-211ENST00000512243 GPAT2Q6NUI2 795 aa11.07□□□□□ -0.64
SNF8-211ENST00000512243 IQCA1Q86XH1 822 aa11.07□□□□□ -0.64
SNF8-211ENST00000512243 ERO1BQ86YB8 467 aa11.07□□□□□ -0.64
SNF8-211ENST00000512243 ALDH16A1Q8IZ83 802 aa11.07□□□□□ -0.64
SNF8-211ENST00000512243 ZNF280CQ8ND82 737 aa11.07□□□□□ -0.64
SNF8-211ENST00000512243 AS3MTQ9HBK9 375 aa11.07□□□□□ -0.64
SNF8-211ENST00000512243 PTPRAP18433 802 aa11.06□□□□□ -0.64
SNF8-211ENST00000512243 RFX1P22670 979 aa11.06□□□□□ -0.64
SNF8-211ENST00000512243 PSMA5P28066 241 aa11.06□□□□□ -0.64
SNF8-211ENST00000512243 ZNF157P51786 506 aaPredicted RBP11.06□□□□□ -0.64
SNF8-211ENST00000512243 ANAPC15P60006 121 aa11.06□□□□□ -0.64
SNF8-211ENST00000512243 SEPT2Q15019 361 aa11.06□□□□□ -0.64
SNF8-211ENST00000512243 CCDC178Q5BJE1 867 aa11.06□□□□□ -0.64
SNF8-211ENST00000512243 ZNF468Q5VIY5 522 aaPredicted RBP11.06□□□□□ -0.64
SNF8-211ENST00000512243 RGMBQ6NW40 437 aa11.06□□□□□ -0.64
SNF8-211ENST00000512243 RASAL3Q86YV0 1011 aa11.06□□□□□ -0.64
SNF8-211ENST00000512243 MB21D2Q8IYB1 491 aaPredicted RBP11.06□□□□□ -0.64
SNF8-211ENST00000512243 OPTNQ96CV9 577 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms