RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 SHROOM1Q2M3G4 852 aaPredicted RBP9.21□□□□□ -0.94
HTT-209ENST00000512068 NBPF12Q5TAG4 269 aaPredicted RBP9.21□□□□□ -0.94
HTT-209ENST00000512068 TTBK2Q6IQ55 1244 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 USP50Q70EL3 339 aaPredicted RBP9.21□□□□□ -0.94
HTT-209ENST00000512068 FAM160B2Q86V87 743 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 SCYL3Q8IZE3 742 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 SPICE1Q8N0Z3 855 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 REXO1Q8N1G1 1221 aaKnown RBP9.21□□□□□ -0.94
HTT-209ENST00000512068 ANP32BQ92688 251 aaKnown RBP9.21□□□□□ -0.94
HTT-209ENST00000512068 CUL5Q93034 780 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 TEPSINQ96N21 525 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 WRNIP1Q96S55 665 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 ZMYND12Q9H0C1 365 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 TNMDQ9H2S6 317 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 JMJD4Q9H9V9 463 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 PRM3Q9NNZ6 103 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 EVA1BQ9NVM1 165 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 FAM13BQ9NYF5 915 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 TMEM63CQ9P1W3 806 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 PCDHA7Q9UN72 937 aa9.21□□□□□ -0.94
HTT-209ENST00000512068 ASTN2O75129 1339 aaPredicted RBP9.21□□□□□ -0.94
HTT-209ENST00000512068 SCN4AP35499 1836 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 USP17L10C9JJH3 530 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 PPP1R12BO60237 982 aaPredicted RBP9.2□□□□□ -0.94
HTT-209ENST00000512068 S1PR4O95977 384 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 CCNYL3P0C7X3 344 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 EPHX2P34913 555 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 ECE1P42892 770 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 ZNF445P59923 1031 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 FAM160A1Q05DH4 1040 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 RRP1BQ14684 758 aaKnown RBP9.2□□□□□ -0.94
HTT-209ENST00000512068 MAP3K11Q16584 847 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 QRICH1Q2TAL8 776 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 FAM83BQ5T0W9 1011 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 MCTP2Q6DN12 878 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 FBXO11Q86XK2 927 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 ACER1Q8TDN7 264 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 LPAR1Q92633 364 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 COA7Q96BR5 231 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 NUP88Q99567 741 aaPredicted RBP9.2□□□□□ -0.94
HTT-209ENST00000512068 NUDT12Q9BQG2 462 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 AMNQ9BXJ7 453 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 TSPY26PQ9H489 355 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 DACT1Q9NYF0 836 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 PGAP2Q9UHJ9 254 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 HOOK1Q9UJC3 728 aaKnown RBP9.2□□□□□ -0.94
HTT-209ENST00000512068 FEM1BQ9UK73 627 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 PCDHA1Q9Y5I3 950 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 CSADQ9Y600 493 aa9.2□□□□□ -0.94
HTT-209ENST00000512068 A0A1W2PRG0 241 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 GLTPD2A6NH11 291 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 PHF20L1A8MW92 1017 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 WDR46O15213 610 aaKnown RBP9.19□□□□□ -0.94
HTT-209ENST00000512068 MCM7P33993 719 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 TXLNAP40222 546 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 IREB2P48200 963 aaKnown RBP9.19□□□□□ -0.94
HTT-209ENST00000512068 ZNF174Q15697 407 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 EAPPQ56P03 285 aaPredicted RBP9.19□□□□□ -0.94
HTT-209ENST00000512068 LRSAM1Q6UWE0 723 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 KRT26Q7Z3Y9 468 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 FERMT2Q96AC1 680 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 KIFC2Q96AC6 838 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 POM121Q96HA1 1249 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 PGBD1Q96JS3 809 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 NAP1L4Q99733 375 aaKnown RBP9.19□□□□□ -0.94
HTT-209ENST00000512068 TANGO6Q9C0B7 1094 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 PSTPIP2Q9H939 334 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 EHMT1Q9H9B1 1298 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 TMOD4Q9NZQ9 345 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 PNMA2Q9UL42 364 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 PCDHA6Q9UN73 950 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 PCDHB6Q9Y5E3 794 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 PCDHA8Q9Y5H6 950 aa9.19□□□□□ -0.94
HTT-209ENST00000512068 MARCH6O60337 910 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 CCDC192P0DO97 292 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 LIG1P18858 919 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 CMA1P23946 247 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 INPP5BP32019 993 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 DEKP35659 375 aaKnown RBP9.18□□□□□ -0.94
HTT-209ENST00000512068 SYKP43405 635 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 MRE11P49959 708 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 HIRAP54198 1017 aaPredicted RBP9.18□□□□□ -0.94
HTT-209ENST00000512068 JAG1P78504 1218 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 ORC2Q13416 577 aaPredicted RBP9.18□□□□□ -0.94
HTT-209ENST00000512068 PRKG1Q13976 671 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 PTPAQ15257 358 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 NR6A1Q15406 480 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 INF2Q27J81 1249 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 SLC35G1Q2M3R5 365 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 USH1GQ495M9 461 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 PRAMEF18Q5VWM3 479 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 JAKMIP3Q5VZ66 844 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 SASS6Q6UVJ0 657 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 BTNL9Q6UXG8 535 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 NEK8Q86SG6 692 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 PNMA8AQ86V59 439 aaPredicted RBP9.18□□□□□ -0.94
HTT-209ENST00000512068 SIAH1Q8IUQ4 282 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 RASGRP4Q8TDF6 673 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 EPS8L1Q8TE68 723 aa9.18□□□□□ -0.94
HTT-209ENST00000512068 TNFRSF25Q93038 417 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms