RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 DBNDD1Q9H9R9 158 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 ZNF711Q9Y462 761 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 KIF28PB7ZC32 967 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 PPEF1O14829 653 aaPredicted RBP11.88□□□□□ -0.51
CPNE4-209ENST00000512055 CRCPO75575 148 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 PPME1Q9Y570 386 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 hCG_2014768A0A024R1R8 64 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 ZBBXA8MT70 800 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 OR52Z1P0C646 297 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 CYP26C1Q6V0L0 522 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 ARMCX6Q7L4S7 300 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 C2CD5Q86YS7 1000 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 ENAHQ8N8S7 591 aaPredicted RBP11.88□□□□□ -0.51
CPNE4-209ENST00000512055 CFAP61Q8NHU2 1237 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 SH3RF3Q8TEJ3 882 aaPredicted RBP11.88□□□□□ -0.51
CPNE4-209ENST00000512055 CCDC159P0C7I6 412 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 RAPGEF1Q13905 1077 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 MORC3Q14149 939 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 GRAMD4Q6IC98 578 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 HS2ST1Q7LGA3 356 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 SLC44A5Q8NCS7 719 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 FAM84BQ96KN1 310 aaPredicted RBP11.88□□□□□ -0.51
CPNE4-209ENST00000512055 CPVLQ9H3G5 476 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.88□□□□□ -0.51
CPNE4-209ENST00000512055 SLIT1O75093 1534 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 KCNJ18B7U540 433 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 PRPF3O43395 683 aaKnown RBP11.88□□□□□ -0.51
CPNE4-209ENST00000512055 KRT10P13645 584 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 KCNJ12Q14500 433 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 NKX1-1Q15270 411 aaPredicted RBP11.88□□□□□ -0.51
CPNE4-209ENST00000512055 ZNF354CQ86Y25 554 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 CPXCR1Q8N123 301 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 FAM71BQ8TC56 605 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 PSTPIP2Q9H939 334 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 ARHGEF10LQ9HCE6 1279 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 MAN1B1Q9UKM7 699 aa11.88□□□□□ -0.51
CPNE4-209ENST00000512055 PPP4R3AQ6IN85 833 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 TRIML1Q8N9V2 468 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 LMBR1Q8WVP7 490 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 SAAL1Q96ER3 474 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 BRIP1Q9BX63 1249 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 GJA3Q9Y6H8 435 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 UBN2Q6ZU65 1347 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 FER1L4A9Z1Z3 1794 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 RPN1P04843 607 aaKnown RBP11.87□□□□□ -0.51
CPNE4-209ENST00000512055 HNRNPCP07910 306 aaKnown RBP eCLIP11.87□□□□□ -0.51
CPNE4-209ENST00000512055 ITPK1Q13572 414 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 MAP3K21Q5TCX8 1036 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 HHATQ5VTY9 493 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 MAEAQ7L5Y9 396 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 TSGA10Q9BZW7 698 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 FAM207AQ9NSI2 230 aaPredicted RBP11.87□□□□□ -0.51
CPNE4-209ENST00000512055 DDX39AO00148 427 aaKnown RBP11.87□□□□□ -0.51
CPNE4-209ENST00000512055 BBOX1O75936 387 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 SLC16A2P36021 539 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 SPATA1Q5VX52 437 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 NLGN1Q8N2Q7 840 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 PCDHA4Q9UN74 947 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 ATP6V0A2Q9Y487 856 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 GTPBP6O43824 516 aaPredicted RBP11.87□□□□□ -0.51
CPNE4-209ENST00000512055 CAMTA2O94983 1202 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 GUCY1A2P33402 732 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 GNGT1P63211 74 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 FMR1NBQ8N0W7 255 aaPredicted RBP11.87□□□□□ -0.51
CPNE4-209ENST00000512055 TBC1D5Q92609 795 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 SENP2Q9HC62 589 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 ARHGAP23Q9P227 1491 aa11.87□□□□□ -0.51
CPNE4-209ENST00000512055 DMTNQ08495 405 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 CERKLQ49MI3 558 aaPredicted RBP11.86□□□□□ -0.51
CPNE4-209ENST00000512055 JAKMIP2Q96AA8 810 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 PDLIM2Q96JY6 352 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 PIGSQ96S52 555 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 NAP1L4Q99733 375 aaKnown RBP11.86□□□□□ -0.51
CPNE4-209ENST00000512055 DCP1AQ9NPI6 582 aaPredicted RBP11.86□□□□□ -0.51
CPNE4-209ENST00000512055 RRP15Q9Y3B9 282 aaKnown RBP11.86□□□□□ -0.51
CPNE4-209ENST00000512055 PPFIA4O75335 1185 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 CASP1P29466 404 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 PPFIA1Q13136 1202 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 TRIM14Q14142 442 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 TRIM60Q495X7 471 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 CCDC14Q49A88 953 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 HAUS3Q68CZ6 603 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 TMTC1Q8IUR5 882 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 SAMSN1Q9NSI8 373 aaKnown RBP11.86□□□□□ -0.51
CPNE4-209ENST00000512055 BCAP29Q9UHQ4 241 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 ZNF215Q9UL58 517 aaPredicted RBP11.86□□□□□ -0.51
CPNE4-209ENST00000512055 SRPRBQ9Y5M8 271 aaKnown RBP11.86□□□□□ -0.51
CPNE4-209ENST00000512055 TCP10L2B9ZVM9 353 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 ALX1Q15699 326 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 RUFY4Q6ZNE9 571 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 KCTD1Q719H9 257 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 RILPQ96NA2 401 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 SLC39A2Q9NP94 309 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 SCOCQ9UIL1 159 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 MST1RQ04912 1400 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 PPP1R2P41236 205 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 ANTXR2P58335 489 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 DLGAP5Q15398 846 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 C8orf74Q6P047 294 aa11.86□□□□□ -0.51
CPNE4-209ENST00000512055 BCAS4Q8TDM0 211 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms