RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 SH3RF3Q8TEJ3 882 aaPredicted RBP5.35□□□□□ -1.55
SCAMP1-204ENST00000511551 SPON2Q9BUD6 331 aa5.35□□□□□ -1.55
SCAMP1-204ENST00000511551 MENTQ9BUN1 341 aa5.35□□□□□ -1.55
SCAMP1-204ENST00000511551 MRIQ9BWK5 157 aa5.35□□□□□ -1.55
SCAMP1-204ENST00000511551 WHRNQ9P202 907 aa5.35□□□□□ -1.55
SCAMP1-204ENST00000511551 ST6GALNAC2Q9UJ37 374 aa5.35□□□□□ -1.55
SCAMP1-204ENST00000511551 KRTAP1-1Q07627 177 aa5.34□□□□□ -1.55
SCAMP1-204ENST00000511551 PPP2R5DQ14738 602 aa5.34□□□□□ -1.55
SCAMP1-204ENST00000511551 LIMS2Q7Z4I7 341 aa5.34□□□□□ -1.55
SCAMP1-204ENST00000511551 MIB1Q86YT6 1006 aa5.34□□□□□ -1.55
SCAMP1-204ENST00000511551 TXNDC5Q8NBS9 432 aaKnown RBP5.34□□□□□ -1.55
SCAMP1-204ENST00000511551 RNF34Q969K3 372 aa5.34□□□□□ -1.55
SCAMP1-204ENST00000511551 GULP1Q9UBP9 304 aa5.34□□□□□ -1.55
SCAMP1-204ENST00000511551 ZNF536O15090 1300 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 LTBP3Q9NS15 1303 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 TRBV23OR9-2A0A075B6M9 112 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 C2orf71A6NGG8 1288 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 C9orf118A6NHY6 69 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 SEPHS1P49903 392 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 SURF1Q15526 300 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 C9orf131Q5VYM1 1079 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 MCTP2Q6DN12 878 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 PLEKHO2Q8TD55 490 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 KISS1RQ969F8 398 aaPredicted RBP5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 HAUS7Q99871 368 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 SYT3Q9BQG1 590 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 CD248Q9HCU0 757 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 FAM86C1Q9NVL1 165 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 SIT1Q9Y3P8 196 aa5.33□□□□□ -1.56
SCAMP1-204ENST00000511551 C7orf72A4D263 438 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 STXBP3O00186 592 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 VAMP4O75379 141 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 NTRK1P04629 796 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 PAMP19021 973 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 ETV3LQ6ZN32 361 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 RUFY4Q6ZNE9 571 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 CPNE8Q86YQ8 564 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 ARHGEF39Q8N4T4 335 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 DNERQ8NFT8 737 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 USP33Q8TEY7 942 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 FERD3LQ96RJ6 166 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 CDK5RAP1Q96SZ6 601 aaKnown RBP5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 KLHL25Q9H0H3 589 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 SLITRK6Q9H5Y7 841 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 PPP4R1LQ9P1A2 415 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 BACE2Q9Y5Z0 518 aa5.32□□□□□ -1.56
SCAMP1-204ENST00000511551 NPHP3-ACAD11A0A0J9YXS1 232 aa5.31□□□□□ -1.56
SCAMP1-204ENST00000511551 LAMTOR5O43504 91 aa5.31□□□□□ -1.56
SCAMP1-204ENST00000511551 B4GALT3O60512 393 aa5.31□□□□□ -1.56
SCAMP1-204ENST00000511551 FZD7O75084 574 aa5.31□□□□□ -1.56
SCAMP1-204ENST00000511551 GRB10Q13322 594 aa5.31□□□□□ -1.56
SCAMP1-204ENST00000511551 ZFPM1Q8IX07 1006 aa5.31□□□□□ -1.56
SCAMP1-204ENST00000511551 FAM26EQ8N5C1 309 aa5.31□□□□□ -1.56
SCAMP1-204ENST00000511551 RCC1LQ96I51 464 aaKnown RBP5.31□□□□□ -1.56
SCAMP1-204ENST00000511551 LCORQ96JN0 433 aaPredicted RBP5.31□□□□□ -1.56
SCAMP1-204ENST00000511551 ZNF747Q9BV97 191 aa5.31□□□□□ -1.56
SCAMP1-204ENST00000511551 KLC2Q9H0B6 622 aa5.31□□□□□ -1.56
SCAMP1-204ENST00000511551 DDX3XO00571 662 aaKnown RBP eCLIP5.3□□□□□ -1.569e-11■■■■■ 54
SCAMP1-204ENST00000511551 SGSM2O43147 1006 aa5.3□□□□□ -1.56
SCAMP1-204ENST00000511551 NPHS1O60500 1241 aa5.3□□□□□ -1.56
SCAMP1-204ENST00000511551 FUCA1P04066 466 aa5.3□□□□□ -1.56
SCAMP1-204ENST00000511551 ITGA1P56199 1179 aa5.3□□□□□ -1.56
SCAMP1-204ENST00000511551 ICAM4Q14773 271 aa5.3□□□□□ -1.56
SCAMP1-204ENST00000511551 DPY19L1Q2PZI1 675 aa5.3□□□□□ -1.56
SCAMP1-204ENST00000511551 CD300LDQ6UXZ3 194 aa5.3□□□□□ -1.56
SCAMP1-204ENST00000511551 DCP2Q8IU60 420 aaKnown RBP5.3□□□□□ -1.56
SCAMP1-204ENST00000511551 ADCY4Q8NFM4 1077 aa5.3□□□□□ -1.56
SCAMP1-204ENST00000511551 AMPD2Q01433 879 aa5.29□□□□□ -1.56
SCAMP1-204ENST00000511551 LDLRAD1Q5T700 205 aa5.29□□□□□ -1.56
SCAMP1-204ENST00000511551 HEATR6Q6AI08 1181 aaKnown RBP5.29□□□□□ -1.56
SCAMP1-204ENST00000511551 PLEKHH3Q7Z736 793 aa5.29□□□□□ -1.56
SCAMP1-204ENST00000511551 ZC3H18Q86VM9 953 aaKnown RBP5.29□□□□□ -1.56
SCAMP1-204ENST00000511551 DPF3Q92784 378 aa5.29□□□□□ -1.56
SCAMP1-204ENST00000511551 MMP19Q99542 508 aa5.29□□□□□ -1.56
SCAMP1-204ENST00000511551 GBP3Q9H0R5 595 aa5.29□□□□□ -1.56
SCAMP1-204ENST00000511551 PCED1AQ9H1Q7 454 aa5.29□□□□□ -1.56
SCAMP1-204ENST00000511551 NGRNQ9NPE2 291 aaKnown RBP5.29□□□□□ -1.56
SCAMP1-204ENST00000511551 CGGBP1Q9UFW8 167 aaPredicted RBP5.29□□□□□ -1.56
SCAMP1-204ENST00000511551 GPR42O15529 346 aa5.28□□□□□ -1.56
SCAMP1-204ENST00000511551 PPM1BO75688 479 aa5.28□□□□□ -1.56
SCAMP1-204ENST00000511551 ZNF28P17035 718 aa5.28□□□□□ -1.56
SCAMP1-204ENST00000511551 GNPTABQ3T906 1256 aa5.28□□□□□ -1.56
SCAMP1-204ENST00000511551 USP51Q70EK9 711 aa5.28□□□□□ -1.56
SCAMP1-204ENST00000511551 STK32CQ86UX6 486 aa5.28□□□□□ -1.56
SCAMP1-204ENST00000511551 SEC14L1Q92503 715 aa5.28□□□□□ -1.56
SCAMP1-204ENST00000511551 COPS5Q92905 334 aa5.28□□□□□ -1.56
SCAMP1-204ENST00000511551 MBD6Q96DN6 1003 aa5.28□□□□□ -1.56
SCAMP1-204ENST00000511551 AP5M1Q9H0R1 490 aa5.28□□□□□ -1.56
SCAMP1-204ENST00000511551 VPS11Q9H270 941 aa5.28□□□□□ -1.56
SCAMP1-204ENST00000511551 PHAXQ9H814 394 aaKnown RBP5.28□□□□□ -1.56
SCAMP1-204ENST00000511551 PPT2Q9UMR5 302 aa5.28□□□□□ -1.56
SCAMP1-204ENST00000511551 SLC12A7Q9Y666 1083 aa5.28□□□□□ -1.56
SCAMP1-204ENST00000511551 NPEPPSL1A6NEC2 478 aa5.27□□□□□ -1.57
SCAMP1-204ENST00000511551 AMHP03971 560 aa5.27□□□□□ -1.57
SCAMP1-204ENST00000511551 EPHX1P07099 455 aa5.27□□□□□ -1.57
SCAMP1-204ENST00000511551 SLC6A11P48066 632 aa5.27□□□□□ -1.57
SCAMP1-204ENST00000511551 EPHB4P54760 987 aa5.27□□□□□ -1.57
SCAMP1-204ENST00000511551 ADAM9Q13443 819 aa5.27□□□□□ -1.57
SCAMP1-204ENST00000511551 R3HDM1Q15032 1099 aaKnown RBP5.27□□□□□ -1.57
SCAMP1-204ENST00000511551 FBXW10Q5XX13 1052 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms