RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SPPL2CQ8IUH8 684 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 IFNL3Q8IZI9 196 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 ANKS4BQ8N8V4 417 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 TMEM52Q8NDY8 209 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 SLC7A14Q8TBB6 771 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 USP33Q8TEY7 942 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 MFSD3Q96ES6 412 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 MAGEB10Q96LZ2 347 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 GPR27Q9NS67 375 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 C19orf73Q9NVV2 129 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 EBF1Q9UH73 591 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 ZNF281Q9Y2X9 895 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 PCDHA9Q9Y5H5 950 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 TAF6LQ9Y6J9 622 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 ASXL2Q76L83 1435 aa4.88□□□□□ -1.63
TRAPPC11-207ENST00000511409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 A0A1W2PQJ5 194 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 C7orf72A4D263 438 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 FADS2P1A8MWK0 482 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 ARNTLO00327 626 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 OPA1O60313 960 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 RFPL3O75679 317 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 RASGRP1O95267 797 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 CRTAMO95727 393 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 MYCLP1P12525 358 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 RAC2P15153 192 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 KIR2DL1P43626 348 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 KIR2DL2P43627 348 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 GPR85P60893 370 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 MBLAC2Q68D91 279 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 RSPO2Q6UXX9 243 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 FGD2Q7Z6J4 655 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 ZC3H7AQ8IWR0 971 aaKnown RBP4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 RCBTB1Q8NDN9 531 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 PDZD8Q8NEN9 1154 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 LINC01599Q8WXQ3 324 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 JMJD8Q96S16 334 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 ALG1Q9BT22 464 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 G6PC3Q9BUM1 346 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 GULP1Q9UBP9 304 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 PRKAB1Q9Y478 270 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 PCDHA8Q9Y5H6 950 aa4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 TIMM13Q9Y5L4 95 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC11-207ENST00000511409 A0A1W2PQ45 241 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 A0A1W2PQY0 241 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 WTIPA6NIX2 430 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 MSCO60682 206 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 NAT1P18440 290 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 SDSP20132 328 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 BCL6P41182 706 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 ERVFC1P60507 584 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 RPL11P62913 178 aaKnown RBP4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 CHRNEQ04844 493 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 HSF5Q4G112 596 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 TRIM61Q5EBN2 209 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 ZNF648Q5T619 568 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 LBX2Q6XYB7 198 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 GSTCDQ8NEC7 633 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 NUP43Q8NFH3 380 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 BHLHE22Q8NFJ8 381 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 FAM168AQ92567 244 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 ZFYVE21Q9BQ24 234 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 C19orf44Q9H6X5 657 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 SPC25Q9HBM1 224 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 TRIM39Q9HCM9 518 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 CLDND1Q9NY35 253 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 MARCH2Q9P0N8 246 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 IMPACTQ9P2X3 320 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 MAGEC2Q9UBF1 373 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 RWDD3Q9Y3V2 267 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 NPFFR2Q9Y5X5 522 aa4.86□□□□□ -1.63
TRAPPC11-207ENST00000511409 FITM1A5D6W6 292 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 DNAJC6O75061 913 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 DNAJC8O75937 253 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 FARP2O94887 1054 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 FUCA1P04066 466 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 SRGAP2CP0DJJ0 459 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 TACR1P25103 407 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 CNGA1P29973 690 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 TRHRP34981 398 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 FLT3P36888 993 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 MASP1P48740 699 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 NEK4P51957 841 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 GTF2A2P52657 109 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 LSAMPQ13449 338 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 TESK1Q15569 626 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 KIZQ2M2Z5 673 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 CT47A1Q5JQC4 288 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 GALNT18Q6P9A2 607 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 CEP68Q76N32 757 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 SLCO6A1Q86UG4 719 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 ZSWIM9Q86XI8 627 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 SIRT2Q8IXJ6 389 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 MYLIPQ8WY64 445 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 TRMT2BQ96GJ1 504 aaKnown RBP4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 SCLYQ96I15 445 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 IFT57Q9NWB7 429 aa4.85□□□□□ -1.63
TRAPPC11-207ENST00000511409 FAM53CQ9NYF3 392 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms