RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 PCBP1Q15365 356 aaKnown RBP eCLIP10.81□□□□□ -0.68
POLR2J3-215ENST00000511313 ZNF484Q5JVG2 852 aa10.81□□□□□ -0.68
POLR2J3-215ENST00000511313 LRCH2Q5VUJ6 765 aa10.81□□□□□ -0.68
POLR2J3-215ENST00000511313 PDXDC2PQ6P474 469 aa10.81□□□□□ -0.68
POLR2J3-215ENST00000511313 TMEM47Q9BQJ4 181 aa10.81□□□□□ -0.68
POLR2J3-215ENST00000511313 XPNPEP3Q9NQH7 507 aa10.81□□□□□ -0.68
POLR2J3-215ENST00000511313 APOBEC3HQ6NTF7 200 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 CCDC83Q8IWF9 413 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 TSEN34Q9BSV6 310 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 TPCN1Q9ULQ1 816 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 AKT3Q9Y243 479 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 BTAF1O14981 1849 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 HBP1O60381 514 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 ECM2O94769 699 aaPredicted RBP10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 RFC5P40937 340 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 FOSBP53539 338 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 ZNF543Q08ER8 600 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 SLFN12LQ6IEE8 588 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 CATSPERGQ6ZRH7 1159 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 C7orf43Q8WVR3 580 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 LRWD1Q9UFC0 647 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 NEMFO60524 1076 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 SP4Q02446 784 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 CCDC173Q0VFZ6 552 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 PPP1R2P3Q6NXS1 205 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 ZNF397Q8NF99 534 aaPredicted RBP10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 SPATA33Q96N06 139 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 MRPL9Q9BYD2 267 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 FRMPD2Q68DX3 1309 aaPredicted RBP10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 RAB27AP51159 221 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 USP38Q8NB14 1042 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 MAP4K1Q92918 833 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 UBA5Q9GZZ9 404 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 ERAP1Q9NZ08 941 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 PCDHA4Q9UN74 947 aa10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 RBM19Q9Y4C8 960 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-215ENST00000511313 M0R2C6 588 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 TBX3O15119 743 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 CALUO43852 315 aaPredicted RBP10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 CAPN15O75808 1086 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 GJB1P08034 283 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 AKR1B1P15121 316 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 ERCC3P19447 782 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 DMP1Q13316 513 aaPredicted RBP10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 XKR9Q5GH70 373 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 ZSWIM4Q9H7M6 989 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 SYNGAP1Q96PV0 1343 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 C17orf102A2RUQ5 167 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 IDEP14735 1019 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 SFSWAPQ12872 951 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 TRPC3Q13507 836 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 JAKMIP3Q5VZ66 844 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 CCDC70Q6NSX1 233 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 CEP95Q96GE4 821 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 TMEM51Q9NW97 253 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 STK36Q9NRP7 1315 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 GPR182O15218 404 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 DYNC1LI2O43237 492 aaPredicted RBP10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 ELAVL2Q12926 359 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 MTMR1Q13613 665 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 SH3D19Q5HYK7 790 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 WDR44Q5JSH3 913 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 CCDC144CPQ8IYA2 1237 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 ZKSCAN4Q969J2 545 aaPredicted RBP10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 Q9Y3F1 56 aa10.79□□□□□ -0.68
POLR2J3-215ENST00000511313 N4BP1O75113 896 aaKnown RBP10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 CAND2O75155 1236 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 TNNC2P02585 160 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 MUTP22033 750 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 KMT5BQ4FZB7 885 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 TTC38Q5R3I4 469 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 NCAPH2Q6IBW4 605 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 KCTD1Q719H9 257 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 ZNF467Q7Z7K2 595 aaPredicted RBP10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 MICAL1Q8TDZ2 1067 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 FRMD4BQ9Y2L6 1034 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 XIRP1Q702N8 1843 aaKnown RBP10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 CNTNAP1P78357 1384 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 VCAM1P19320 739 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 PTPREP23469 700 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 INPP5BP32019 993 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 EFNA5P52803 228 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 APBB2Q92870 758 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 SAMD11Q96NU1 681 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 FTHL17Q9BXU8 183 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 C11orf49Q9H6J7 331 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 DDX25Q9UHL0 483 aaKnown RBP10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 PCDHA12Q9UN75 941 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 ATP11BQ9Y2G3 1177 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 IFNAR1P17181 557 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 LIG1P18858 919 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 PLCB2Q00722 1185 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 AMPD2Q01433 879 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 EP400NLQ6ZTU2 488 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 SAPCD2Q86UD0 394 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 ANO3Q9BYT9 981 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 COL4A3BPQ9Y5P4 624 aa10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 COL2A1P02458 1487 aaPredicted RBP10.78□□□□□ -0.68
POLR2J3-215ENST00000511313 A0A0G2JLL6 359 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms