RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 ADGRF5Q8IZF2 1346 aa8.03□□□□□ -1.12
GYPB-212ENST00000511198 PIK3C2AO00443 1686 aa8.03□□□□□ -1.12
GYPB-212ENST00000511198 RBM47A0AV96 593 aaKnown RBP8.03□□□□□ -1.12
GYPB-212ENST00000511198 ZNF503-AS2A6NEH8 195 aa8.03□□□□□ -1.12
GYPB-212ENST00000511198 GLTPD2A6NH11 291 aa8.03□□□□□ -1.12
GYPB-212ENST00000511198 GCP02774 474 aa8.03□□□□□ -1.12
GYPB-212ENST00000511198 AFMP43652 599 aa8.03□□□□□ -1.12
GYPB-212ENST00000511198 TSPYL5Q86VY4 417 aaPredicted RBP8.03□□□□□ -1.12
GYPB-212ENST00000511198 CREG2Q8IUH2 290 aa8.03□□□□□ -1.12
GYPB-212ENST00000511198 ASPNQ9BXN1 380 aa8.03□□□□□ -1.12
GYPB-212ENST00000511198 WDR17Q8IZU2 1322 aa8.03□□□□□ -1.12
GYPB-212ENST00000511198 PASKQ96RG2 1323 aa8.03□□□□□ -1.12
GYPB-212ENST00000511198 SBF1O95248 1867 aa8.02□□□□□ -1.12
GYPB-212ENST00000511198 ADAMTS7Q9UKP4 1686 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 NUP155O75694 1391 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 KIF1BO60333 1816 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 DNAJC25-GNG10A0A024R161 153 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.02□□□□□ -1.13
GYPB-212ENST00000511198 UBOX5O94941 541 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 CLCQ05315 142 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 KCNMB1Q16558 191 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 SEZ6Q53EL9 994 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 ARSHQ5FYA8 562 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 RALGPS1Q5JS13 557 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 AMIGO3Q86WK7 504 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 HOMEZQ8IX15 550 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 REXO1Q8N1G1 1221 aaKnown RBP8.02□□□□□ -1.13
GYPB-212ENST00000511198 EAF1Q96JC9 268 aaPredicted RBP8.02□□□□□ -1.13
GYPB-212ENST00000511198 NT5C1AQ9BXI3 368 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 GPATCH2Q9NW75 528 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.02□□□□□ -1.13
GYPB-212ENST00000511198 SLAMF8Q9P0V8 285 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 GMIPQ9P107 970 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 CASP8AP2Q9UKL3 1982 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 YTHDC2Q9H6S0 1430 aaKnown RBP8.02□□□□□ -1.13
GYPB-212ENST00000511198 WDR33Q9C0J8 1336 aaKnown RBP8.02□□□□□ -1.13
GYPB-212ENST00000511198 USP54Q70EL1 1684 aa8.02□□□□□ -1.13
GYPB-212ENST00000511198 KAT6BQ8WYB5 2073 aa8.01□□□□□ -1.13
GYPB-212ENST00000511198 LY75O60449 1722 aa8.01□□□□□ -1.13
GYPB-212ENST00000511198 SHISA3A0PJX4 238 aa8.01□□□□□ -1.13
GYPB-212ENST00000511198 C8AP07357 584 aa8.01□□□□□ -1.13
GYPB-212ENST00000511198 DPEP1P16444 411 aa8.01□□□□□ -1.13
GYPB-212ENST00000511198 TGFB2P61812 414 aa8.01□□□□□ -1.13
GYPB-212ENST00000511198 FANCCQ00597 558 aa8.01□□□□□ -1.13
GYPB-212ENST00000511198 APOBRQ0VD83 1088 aa8.01□□□□□ -1.13
GYPB-212ENST00000511198 CDCP2Q5VXM1 449 aa8.01□□□□□ -1.13
GYPB-212ENST00000511198 OVOS1Q6IE37 1185 aa8.01□□□□□ -1.13
GYPB-212ENST00000511198 SLITRK4Q8IW52 837 aa8.01□□□□□ -1.13
GYPB-212ENST00000511198 PPLO60437 1756 aa8.01□□□□□ -1.13
GYPB-212ENST00000511198 SPATA31E1Q6ZUB1 1445 aa8.01□□□□□ -1.13
GYPB-212ENST00000511198 RPGRIP1LQ68CZ1 1315 aa8.01□□□□□ -1.13
GYPB-212ENST00000511198 MEGF6O75095 1541 aa8□□□□□ -1.13
GYPB-212ENST00000511198 RASSF10A6NK89 507 aa8□□□□□ -1.13
GYPB-212ENST00000511198 RAG1P15918 1043 aa8□□□□□ -1.13
GYPB-212ENST00000511198 KCNA3P22001 575 aa8□□□□□ -1.13
GYPB-212ENST00000511198 GBP1P32455 592 aa8□□□□□ -1.13
GYPB-212ENST00000511198 ZNF76P36508 570 aa8□□□□□ -1.13
GYPB-212ENST00000511198 DEFB115Q30KQ5 88 aa8□□□□□ -1.13
GYPB-212ENST00000511198 GK5Q6ZS86 529 aa8□□□□□ -1.13
GYPB-212ENST00000511198 ATG4CQ96DT6 458 aa8□□□□□ -1.13
GYPB-212ENST00000511198 CCDC120Q96HB5 630 aa8□□□□□ -1.13
GYPB-212ENST00000511198 KIRREL1Q96J84 757 aa8□□□□□ -1.13
GYPB-212ENST00000511198 PRAM1Q96QH2 718 aa8□□□□□ -1.13
GYPB-212ENST00000511198 CNNM2Q9H8M5 875 aa8□□□□□ -1.13
GYPB-212ENST00000511198 DUSP13Q9UII6 198 aa8□□□□□ -1.13
GYPB-212ENST00000511198 KIF13BQ9NQT8 1826 aa8□□□□□ -1.13
GYPB-212ENST00000511198 POLR2BP30876 1174 aaKnown RBP7.99□□□□□ -1.13
GYPB-212ENST00000511198 BRCA1P38398 1863 aaKnown RBP7.99□□□□□ -1.13
GYPB-212ENST00000511198 ZNF648Q5T619 568 aaPredicted RBP7.99□□□□□ -1.13
GYPB-212ENST00000511198 TTC6Q86TZ1 520 aa7.99□□□□□ -1.13
GYPB-212ENST00000511198 KIAA0825Q8IV33 1275 aa7.99□□□□□ -1.13
GYPB-212ENST00000511198 VPS8Q8N3P4 1428 aa7.99□□□□□ -1.13
GYPB-212ENST00000511198 NKD1Q969G9 470 aa7.99□□□□□ -1.13
GYPB-212ENST00000511198 SPON2Q9BUD6 331 aa7.99□□□□□ -1.13
GYPB-212ENST00000511198 ADAMTS10Q9H324 1103 aa7.99□□□□□ -1.13
GYPB-212ENST00000511198 ANTXR1Q9H6X2 564 aa7.99□□□□□ -1.13
GYPB-212ENST00000511198 METTL5Q9NRN9 209 aaKnown RBP7.99□□□□□ -1.13
GYPB-212ENST00000511198 TMEM59LQ9UK28 342 aa7.99□□□□□ -1.13
GYPB-212ENST00000511198 CCNL1Q9UK58 526 aaPredicted RBP7.99□□□□□ -1.13
GYPB-212ENST00000511198 ARFGEF1Q9Y6D6 1849 aa7.99□□□□□ -1.13
GYPB-212ENST00000511198 LTBP1Q14766 1721 aa7.98□□□□□ -1.13
GYPB-212ENST00000511198 GLI1P08151 1106 aa7.98□□□□□ -1.13
GYPB-212ENST00000511198 ZNF165P49910 485 aa7.98□□□□□ -1.13
GYPB-212ENST00000511198 ERVFC1P60507 584 aa7.98□□□□□ -1.13
GYPB-212ENST00000511198 EGR3Q06889 387 aa7.98□□□□□ -1.13
GYPB-212ENST00000511198 LIN37Q96GY3 246 aaPredicted RBP7.98□□□□□ -1.13
GYPB-212ENST00000511198 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.98□□□□□ -1.13
GYPB-212ENST00000511198 PCDHA11Q9Y5I1 949 aa7.98□□□□□ -1.13
GYPB-212ENST00000511198 ABCC6O95255 1503 aa7.98□□□□□ -1.13
GYPB-212ENST00000511198 FARP2O94887 1054 aaPredicted RBP7.97□□□□□ -1.13
GYPB-212ENST00000511198 MCM4P33991 863 aa7.97□□□□□ -1.13
GYPB-212ENST00000511198 MESP2Q0VG99 397 aa7.97□□□□□ -1.13
GYPB-212ENST00000511198 ZNF394Q53GI3 561 aa7.97□□□□□ -1.13
GYPB-212ENST00000511198 NLRC3Q7RTR2 1065 aa7.97□□□□□ -1.13
GYPB-212ENST00000511198 USP48Q86UV5 1035 aa7.97□□□□□ -1.13
GYPB-212ENST00000511198 SP110Q9HB58 689 aa7.97□□□□□ -1.13
GYPB-212ENST00000511198 FAM53CQ9NYF3 392 aa7.97□□□□□ -1.13
GYPB-212ENST00000511198 KDM6AO15550 1401 aaPredicted RBP7.96□□□□□ -1.13
GYPB-212ENST00000511198 LRRC10BA6NIK2 292 aa7.96□□□□□ -1.14
GYPB-212ENST00000511198 MEIS3P2A8K0S8 358 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms