RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 SOS2Q07890 1332 aaPredicted RBP11.54□□□□□ -0.56
NEK1-206ENST00000510533 ABCC2Q92887 1545 aa11.54□□□□□ -0.56
NEK1-206ENST00000510533 KDM5AP29375 1690 aaKnown RBP11.54□□□□□ -0.56
NEK1-206ENST00000510533 PGRMC1O00264 195 aaKnown RBP11.54□□□□□ -0.56
NEK1-206ENST00000510533 AFPP02771 609 aaKnown RBP11.54□□□□□ -0.56
NEK1-206ENST00000510533 PIK3CAP42336 1068 aa11.54□□□□□ -0.56
NEK1-206ENST00000510533 COG7P83436 770 aa11.54□□□□□ -0.56
NEK1-206ENST00000510533 RNASELQ05823 741 aaKnown RBP11.54□□□□□ -0.56
NEK1-206ENST00000510533 MAP7D3Q8IWC1 876 aa11.54□□□□□ -0.56
NEK1-206ENST00000510533 ADPGKQ9BRR6 497 aa11.54□□□□□ -0.56
NEK1-206ENST00000510533 RNF14Q9UBS8 474 aa11.54□□□□□ -0.56
NEK1-206ENST00000510533 SLFN14P0C7P3 912 aa11.54□□□□□ -0.56
NEK1-206ENST00000510533 DIXDC1Q155Q3 683 aa11.54□□□□□ -0.56
NEK1-206ENST00000510533 POMGNT1Q8WZA1 660 aa11.54□□□□□ -0.56
NEK1-206ENST00000510533 CSRNP1Q96S65 589 aa11.54□□□□□ -0.56
NEK1-206ENST00000510533 ZNF408Q9H9D4 720 aa11.54□□□□□ -0.56
NEK1-206ENST00000510533 TLR7Q9NYK1 1049 aaKnown RBP11.54□□□□□ -0.56
NEK1-206ENST00000510533 CCDC151A5D8V7 595 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 EIF3CLB5ME19 914 aaKnown RBP11.53□□□□□ -0.56
NEK1-206ENST00000510533 PPIP5K2O43314 1243 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 MGEA5O60502 916 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 ADORA1P30542 326 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 PSMC2P35998 433 aaKnown RBP11.53□□□□□ -0.56
NEK1-206ENST00000510533 C2orf54Q08AI8 447 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 POLA2Q14181 598 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 RASIP1Q5U651 963 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 TRMT2AQ8IZ69 625 aaKnown RBP11.53□□□□□ -0.56
NEK1-206ENST00000510533 NME8Q8N427 588 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 TRIM11Q96F44 468 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 EIF3CQ99613 913 aaKnown RBP11.53□□□□□ -0.56
NEK1-206ENST00000510533 LRRD1A4D1F6 860 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 ASPHQ12797 758 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 JADE1Q6IE81 842 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 TTBK2Q6IQ55 1244 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 ZNF589Q86UQ0 364 aaPredicted RBP11.53□□□□□ -0.56
NEK1-206ENST00000510533 PLEKHF1Q96S99 279 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 HAUS8Q9BT25 410 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 PNMA2Q9UL42 364 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 PPP1R9AQ9ULJ8 1098 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 JRKLQ9Y4A0 524 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 KDM5DQ9BY66 1539 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 TNFAIP1Q13829 316 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 ENOX1Q8TC92 643 aaKnown RBP11.53□□□□□ -0.56
NEK1-206ENST00000510533 GREM2Q9H772 168 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 STK17AQ9UEE5 414 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 TMEM232C9JQI7 657 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 M0R2C6 588 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 SGK1O00141 431 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 MYL1P05976 194 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 GAP43P17677 238 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 SAT1P21673 171 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 HSPA2P54652 639 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 PTPN21Q16825 1174 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 MMEL1Q495T6 779 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 VSTM4Q8IW00 320 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 ACRBPQ8NEB7 543 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 RWDD2AQ9UIY3 292 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 ATP8A1Q9Y2Q0 1164 aa11.53□□□□□ -0.56
NEK1-206ENST00000510533 LRRIQ4A6NIV6 560 aa11.52□□□□□ -0.56
NEK1-206ENST00000510533 STMN1P16949 149 aa11.52□□□□□ -0.56
NEK1-206ENST00000510533 POLGP54098 1239 aaPredicted RBP11.52□□□□□ -0.56
NEK1-206ENST00000510533 PLTPP55058 493 aa11.52□□□□□ -0.56
NEK1-206ENST00000510533 ITKQ08881 620 aa11.52□□□□□ -0.56
NEK1-206ENST00000510533 PABPC4Q13310 644 aaKnown RBP eCLIP11.52□□□□□ -0.56
NEK1-206ENST00000510533 ANKRD35Q8N283 1001 aa11.52□□□□□ -0.56
NEK1-206ENST00000510533 SLC17A8Q8NDX2 589 aa11.52□□□□□ -0.56
NEK1-206ENST00000510533 PARD6BQ9BYG5 372 aa11.52□□□□□ -0.56
NEK1-206ENST00000510533 SOWAHDA6NJG2 315 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 GPC4O75487 556 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 FKBP3Q00688 224 aaKnown RBP11.52□□□□□ -0.57
NEK1-206ENST00000510533 PDE1BQ01064 536 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 FAM98CQ17RN3 349 aaKnown RBP11.52□□□□□ -0.57
NEK1-206ENST00000510533 MUM1L1Q5H9M0 696 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 RFX6Q8HWS3 928 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 ZNF653Q96CK0 615 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 ANO3Q9BYT9 981 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 CCDC68Q9H2F9 335 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 SUGCTQ9HAC7 445 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 TPX2Q9ULW0 747 aaKnown RBP11.52□□□□□ -0.57
NEK1-206ENST00000510533 A6NJR5 290 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 PFDN6O15212 129 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 MMP1P03956 469 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 MAPK4P31152 587 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 ARMC9Q7Z3E5 817 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 TRIM42Q8IWZ5 723 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 FAM186BQ8IYM0 893 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 GRAMD1CQ8IYS0 662 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 NLRP7Q8WX94 980 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 SDCCAG3Q96C92 435 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 AMNQ9BXJ7 453 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 PUS3Q9BZE2 481 aaKnown RBP11.52□□□□□ -0.57
NEK1-206ENST00000510533 ANKFY1Q9P2R3 1169 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 ECEL1O95672 775 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 ASPRV1Q53RT3 343 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 ARHGEF18Q6ZSZ5 1173 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 EXOC4Q96A65 974 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 PBKQ96KB5 322 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 LRGUKQ96M69 825 aa11.52□□□□□ -0.57
NEK1-206ENST00000510533 FTOQ9C0B1 505 aaKnown RBP eCLIP11.52□□□□□ -0.57
NEK1-206ENST00000510533 PCDHB4Q9Y5E5 795 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms