RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 SEMA6BQ9H3T3 888 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 GPCPD1Q9NPB8 672 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 BLOC1S4Q9NUP1 217 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 SUGT1Q9Y2Z0 365 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 MYMKA6NI61 221 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 SLC37A4O43826 429 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 TDP2O95551 362 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 KLK7P49862 253 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 EIF6P56537 245 aaKnown RBP19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 GPS2Q13227 327 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 HDXQ7Z353 690 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 TRAPPC11Q7Z392 1133 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 HPS3Q969F9 1004 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 PNMA5Q96PV4 448 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 SWAP70Q9UH65 585 aa19.99■□□□□ 0.79
CCHCR1-228ENST00000509552 PNMA6FA0A0J9YX94 578 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 RASSF10A6NK89 507 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 BEND6Q5SZJ8 279 aaPredicted RBP19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 SNX29Q8TEQ0 813 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 IGKV6D-41A0A0C4DH26 115 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 CCDC66A2RUB6 948 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 MAP2K7O14733 419 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 TFRCP02786 760 aaKnown RBP19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 TNNI2P48788 182 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 CDK17Q00537 523 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 NCAPH2Q6IBW4 605 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 DYMQ7RTS9 669 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 GUF1Q8N442 669 aaKnown RBP19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 RAD54LQ92698 747 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 COA1Q9GZY4 146 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 RIC8AQ9NPQ8 531 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 SERPINB13Q9UIV8 391 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 SAR1BQ9Y6B6 198 aa19.98■□□□□ 0.79
CCHCR1-228ENST00000509552 UBAP1LF5GYI3 381 aa19.97■□□□□ 0.79
CCHCR1-228ENST00000509552 ZNF543Q08ER8 600 aa19.97■□□□□ 0.79
CCHCR1-228ENST00000509552 PPP4R3AQ6IN85 833 aa19.97■□□□□ 0.79
CCHCR1-228ENST00000509552 GJD4Q96KN9 370 aaPredicted RBP19.97■□□□□ 0.79
CCHCR1-228ENST00000509552 FOCADQ5VW36 1801 aa19.97■□□□□ 0.79
CCHCR1-228ENST00000509552 F8W031 263 aaPredicted RBP19.97■□□□□ 0.79
CCHCR1-228ENST00000509552 ENC1O14682 589 aa19.97■□□□□ 0.79
CCHCR1-228ENST00000509552 RIMBP2O15034 1052 aa19.97■□□□□ 0.79
CCHCR1-228ENST00000509552 VWA3BQ502W6 1294 aa19.97■□□□□ 0.79
CCHCR1-228ENST00000509552 ADGRF4Q8IZF3 695 aa19.97■□□□□ 0.79
CCHCR1-228ENST00000509552 JMJD4Q9H9V9 463 aa19.97■□□□□ 0.79
CCHCR1-228ENST00000509552 ABCB11O95342 1321 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 POTEMA6NI47 508 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 PPEF1O14829 653 aaPredicted RBP19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 IDEP14735 1019 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 CYP2C19P33261 490 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 LRRC63Q05C16 580 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 PSMD2Q13200 908 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 TAF3Q5VWG9 929 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 PAPD7Q5XG87 772 aaKnown RBP19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 SP8Q8IXZ3 490 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 CUL5Q93034 780 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 CCDC42Q96M95 316 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 NDST4Q9H3R1 872 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 MYO3BQ8WXR4 1341 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 MARCH6O60337 910 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 EIF3JO75822 258 aaKnown RBP19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 MRPL12P52815 198 aaKnown RBP19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 SPA17Q15506 151 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 CCDC84Q86UT8 332 aaPredicted RBP19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 TSGA10Q9BZW7 698 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 ABCB6Q9NP58 842 aa19.96■□□□□ 0.79
CCHCR1-228ENST00000509552 ATP1A1P05023 1023 aaKnown RBP19.95■□□□□ 0.78
CCHCR1-228ENST00000509552 KIF5AQ12840 1032 aa19.95■□□□□ 0.78
CCHCR1-228ENST00000509552 MAN2A1Q16706 1144 aa19.95■□□□□ 0.78
CCHCR1-228ENST00000509552 GPATCH4Q5T3I0 446 aaKnown RBP19.95■□□□□ 0.78
CCHCR1-228ENST00000509552 NOA1Q8NC60 698 aaKnown RBP19.95■□□□□ 0.78
CCHCR1-228ENST00000509552 TSG101Q99816 390 aa19.95■□□□□ 0.78
CCHCR1-228ENST00000509552 USP40Q9NVE5 1235 aa19.95■□□□□ 0.78
CCHCR1-228ENST00000509552 DDX25Q9UHL0 483 aaKnown RBP19.95■□□□□ 0.78
CCHCR1-228ENST00000509552 TFR2Q9UP52 801 aa19.95■□□□□ 0.78
CCHCR1-228ENST00000509552 SPATA31A6Q5VVP1 1343 aa19.95■□□□□ 0.78
CCHCR1-228ENST00000509552 VSNL1P62760 191 aa19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 CKAP4Q07065 602 aaKnown RBP19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 DDX12PQ92771 950 aa19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 RPGRIP1Q96KN7 1286 aa19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 DDX4Q9NQI0 724 aaKnown RBP19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 HDAC6Q9UBN7 1215 aa19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 L1RE1Q9UN81 338 aa19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 KLRG2A4D1S0 409 aaPredicted RBP19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 ERICH4A6NGS2 130 aa19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 EDIL3O43854 480 aa19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 HLA-DOAP06340 250 aa19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 UBE2SQ16763 222 aa19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 CCDC96Q2M329 555 aa19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 TMEM119Q4V9L6 283 aa19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 CLEC10AQ8IUN9 316 aa19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 MSL3Q8N5Y2 521 aaKnown RBP19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 ZC3H12CQ9C0D7 883 aaKnown RBP19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 ZCCHC17Q9NP64 241 aaKnown RBP19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 PLAGL2Q9UPG8 496 aa19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 UBR3Q6ZT12 1888 aa19.94■□□□□ 0.78
CCHCR1-228ENST00000509552 ANO9A1A5B4 782 aa19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 HNRNPH3P31942 346 aaKnown RBP19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 VAV2P52735 878 aa19.93■□□□□ 0.78
CCHCR1-228ENST00000509552 DDR1Q08345 913 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms