RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 SUGCTQ9HAC7 445 aa10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 AGPAT5Q9NUQ2 364 aa10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 MCM9Q9NXL9 1143 aa10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 TAF1LQ8IZX4 1826 aa10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 WTIPA6NIX2 430 aaPredicted RBP10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 AGPSO00116 658 aa10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 USO1O60763 962 aaKnown RBP10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 PPFIA4O75335 1185 aa10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 BAG3O95817 575 aa10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 PDE4DQ08499 809 aa10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 LRRC31Q6UY01 552 aa10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 BAP1Q92560 729 aa10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 NLRP3Q96P20 1036 aa10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 BLOC1S4Q9NUP1 217 aa10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 ATXN2Q99700 1313 aaKnown RBP10.28□□□□□ -0.76
PDGFRA-208ENST00000509490 PP2D1A8MPX8 630 aa10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 BTNL10A8MVZ5 291 aa10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 MYO1CO00159 1063 aa10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 PDE2AO00408 941 aaPredicted RBP10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 CES2O00748 559 aa10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 RNF40O75150 1001 aa10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 TACC1O75410 805 aa10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 CPP00450 1065 aa10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 TFRCP02786 760 aaKnown RBP10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 USP17L8P0C7I0 530 aa10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 TRIM21P19474 475 aaKnown RBP10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 ZCWPW2Q504Y3 356 aa10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 EMBQ6PCB8 327 aa10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 LRRC55Q6ZSA7 311 aa10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 AFAP1L1Q8TED9 768 aa10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 MYO3BQ8WXR4 1341 aa10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.27□□□□□ -0.767e-9■■■■■ 72.6
PDGFRA-208ENST00000509490 NOC4LQ9BVI4 516 aaKnown RBP10.27□□□□□ -0.76
PDGFRA-208ENST00000509490 SNHG28P0DPA3 235 aa10.27□□□□□ -0.77
PDGFRA-208ENST00000509490 GRB10Q13322 594 aa10.27□□□□□ -0.77
PDGFRA-208ENST00000509490 ALS2CLQ60I27 953 aa10.27□□□□□ -0.77
PDGFRA-208ENST00000509490 CCDC70Q6NSX1 233 aa10.27□□□□□ -0.77
PDGFRA-208ENST00000509490 RTFDC1Q9BY42 306 aaPredicted RBP10.27□□□□□ -0.77
PDGFRA-208ENST00000509490 ARHGAP20Q9P2F6 1191 aa10.27□□□□□ -0.77
PDGFRA-208ENST00000509490 HDAC6Q9UBN7 1215 aa10.27□□□□□ -0.77
PDGFRA-208ENST00000509490 GPR75-ASB3A0A0A6YYF3 556 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 SRRM3A6NNA2 597 aaPredicted RBP10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 COBLO75128 1261 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 RPS6KA4O75676 772 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 SPA17Q15506 151 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 TBC1D9BQ66K14 1250 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 PPP4R3AQ6IN85 833 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 MREGQ8N565 214 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 CALML4Q96GE6 196 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 PNMA5Q96PV4 448 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 NDST4Q9H3R1 872 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 FAM204AQ9H8W3 233 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 RRP15Q9Y3B9 282 aaKnown RBP10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 HYOU1Q9Y4L1 999 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 PCDHA13Q9Y5I0 950 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 GAKO14976 1311 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 KLRF2D3W0D1 207 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 GOLGA8KD6RF30 607 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 LDHBP07195 334 aaKnown RBP10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 SKOR1P84550 965 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 APBA1Q02410 837 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 DZIP1Q86YF9 867 aaKnown RBP10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 RASGRP4Q8TDF6 673 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 CCDC42Q96M95 316 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 SELENOOQ9BVL4 669 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 FAM107BQ9H098 131 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 RASSF4Q9H2L5 321 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 MAPK8IP1Q9UQF2 711 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 GRID2IPA4D2P6 1211 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 BHMG1C9JSJ3 638 aaPredicted RBP10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 TSPY3P0CV98 308 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 TSPY8P0CW00 308 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 PLCG2P16885 1265 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 MTIF2P46199 727 aaKnown RBP10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 GYS2P54840 703 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 CORO7P57737 925 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 PDXDC1Q6P996 788 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 PAXIP1Q6ZW49 1069 aaPredicted RBP10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 SV2BQ7L1I2 683 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 SH3RF3Q8TEJ3 882 aaPredicted RBP10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 CEP63Q96MT8 703 aa10.26□□□□□ -0.77
PDGFRA-208ENST00000509490 IGKV6D-41A0A0C4DH26 115 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 EDIL3O43854 480 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 IDEP14735 1019 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 ANXA13P27216 316 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 KIF11P52732 1056 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 ASIC1P78348 528 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 HEATR3Q7Z4Q2 680 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 CD302Q8IX05 232 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 ZNF444Q8N0Y2 327 aaPredicted RBP10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 RRP36Q96EU6 259 aaKnown RBP10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 NAP1L4Q99733 375 aaKnown RBP10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 DNAJC5Q9H3Z4 198 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 EFCC1Q9HA90 598 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 A0A0U1RQG5 324 aaPredicted RBP10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 ENC1O14682 589 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 ZEB2O60315 1214 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 GNA14O95837 355 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 IL1R1P14778 569 aa10.25□□□□□ -0.77
PDGFRA-208ENST00000509490 MAGEA9P43362 315 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms