RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 DNERQ8NFT8 737 aa17.02■□□□□ 0.31
HMGCL-208ENST00000509389 ANKS1AQ92625 1134 aa17.02■□□□□ 0.31
HMGCL-208ENST00000509389 DSCC1Q9BVC3 393 aa17.02■□□□□ 0.31
HMGCL-208ENST00000509389 NOC4LQ9BVI4 516 aaKnown RBP17.02■□□□□ 0.31
HMGCL-208ENST00000509389 PBX4Q9BYU1 374 aa17.02■□□□□ 0.31
HMGCL-208ENST00000509389 ZNF576Q9H609 170 aa17.02■□□□□ 0.31
HMGCL-208ENST00000509389 POLR3EQ9NVU0 708 aa17.02■□□□□ 0.31
HMGCL-208ENST00000509389 B4E1Z4 1266 aa17.01■□□□□ 0.31
HMGCL-208ENST00000509389 MYL3P08590 195 aa17.01■□□□□ 0.31
HMGCL-208ENST00000509389 PBX2P40425 430 aa17.01■□□□□ 0.31
HMGCL-208ENST00000509389 CPT1AP50416 773 aa17.01■□□□□ 0.31
HMGCL-208ENST00000509389 CCL23P55773 120 aa17.01■□□□□ 0.31
HMGCL-208ENST00000509389 PURAQ00577 322 aaKnown RBP17.01■□□□□ 0.31
HMGCL-208ENST00000509389 RGS22Q8NE09 1264 aa17.01■□□□□ 0.31
HMGCL-208ENST00000509389 IL27Q8NEV9 243 aa17.01■□□□□ 0.31
HMGCL-208ENST00000509389 OR6J1Q8NGC5 347 aa17.01■□□□□ 0.31
HMGCL-208ENST00000509389 HERVK_113Q902F9 699 aa17.01■□□□□ 0.31
HMGCL-208ENST00000509389 ZSCAN10Q96SZ4 725 aaPredicted RBP17.01■□□□□ 0.31
HMGCL-208ENST00000509389 MPHOSPH6Q99547 160 aaKnown RBP17.01■□□□□ 0.31
HMGCL-208ENST00000509389 WNT8AQ9H1J5 351 aa17.01■□□□□ 0.31
HMGCL-208ENST00000509389 ALDH8A1Q9H2A2 487 aaPredicted RBP17.01■□□□□ 0.31
HMGCL-208ENST00000509389 KAT14Q9H8E8 782 aa17.01■□□□□ 0.31
HMGCL-208ENST00000509389 ZSWIM5Q9P217 1185 aa17.01■□□□□ 0.31
HMGCL-208ENST00000509389 MYO9BQ13459 2157 aa17■□□□□ 0.31
HMGCL-208ENST00000509389 MYH6P13533 1939 aa17■□□□□ 0.31
HMGCL-208ENST00000509389 EYSQ5T1H1 3165 aa17■□□□□ 0.31
HMGCL-208ENST00000509389 FGBP02675 491 aa17■□□□□ 0.31
HMGCL-208ENST00000509389 PPP2R5BQ15173 497 aa17■□□□□ 0.31
HMGCL-208ENST00000509389 CDC37Q16543 378 aaPredicted RBP17■□□□□ 0.31
HMGCL-208ENST00000509389 ADGRF4Q8IZF3 695 aa17■□□□□ 0.31
HMGCL-208ENST00000509389 ENAHQ8N8S7 591 aaPredicted RBP17■□□□□ 0.31
HMGCL-208ENST00000509389 SCFD2Q8WU76 684 aa17■□□□□ 0.31
HMGCL-208ENST00000509389 COPS5Q92905 334 aa17■□□□□ 0.31
HMGCL-208ENST00000509389 CXXC1Q9P0U4 656 aaPredicted RBP17■□□□□ 0.31
HMGCL-208ENST00000509389 SCN10AQ9Y5Y9 1956 aa16.99■□□□□ 0.31
HMGCL-208ENST00000509389 NKRFO15226 690 aaKnown RBP eCLIP16.99■□□□□ 0.31
HMGCL-208ENST00000509389 IMMTQ16891 758 aaKnown RBP16.99■□□□□ 0.31
HMGCL-208ENST00000509389 TSGA10IPQ3SY00 556 aa16.99■□□□□ 0.31
HMGCL-208ENST00000509389 TBC1D5Q92609 795 aa16.99■□□□□ 0.31
HMGCL-208ENST00000509389 MTG1Q9BT17 334 aaPredicted RBP16.99■□□□□ 0.31
HMGCL-208ENST00000509389 GPHNQ9NQX3 736 aaPredicted RBP16.99■□□□□ 0.31
HMGCL-208ENST00000509389 TRMT13Q9NUP7 481 aaKnown RBP16.99■□□□□ 0.31
HMGCL-208ENST00000509389 CTNNA3Q9UI47 895 aa16.99■□□□□ 0.31
HMGCL-208ENST00000509389 RBM8AQ9Y5S9 174 aaKnown RBP16.99■□□□□ 0.31
HMGCL-208ENST00000509389 GBF1Q92538 1859 aa16.99■□□□□ 0.31
HMGCL-208ENST00000509389 TNKSO95271 1327 aa16.98■□□□□ 0.31
HMGCL-208ENST00000509389 ABCB11O95342 1321 aa16.98■□□□□ 0.31
HMGCL-208ENST00000509389 B4DLN1 442 aa16.98■□□□□ 0.31
HMGCL-208ENST00000509389 TXNP10599 105 aaKnown RBP16.98■□□□□ 0.31
HMGCL-208ENST00000509389 MRPL12P52815 198 aaKnown RBP16.98■□□□□ 0.31
HMGCL-208ENST00000509389 RABEP1Q15276 862 aa16.98■□□□□ 0.31
HMGCL-208ENST00000509389 ASPRV1Q53RT3 343 aa16.98■□□□□ 0.31
HMGCL-208ENST00000509389 OTOP2Q7RTS6 562 aa16.98■□□□□ 0.31
HMGCL-208ENST00000509389 SNX21Q969T3 373 aa16.98■□□□□ 0.31
HMGCL-208ENST00000509389 SCLYQ96I15 445 aa16.98■□□□□ 0.31
HMGCL-208ENST00000509389 KRT23Q9C075 422 aa16.98■□□□□ 0.31
HMGCL-208ENST00000509389 MAF1Q9H063 256 aa16.98■□□□□ 0.31
HMGCL-208ENST00000509389 MTIF3Q9H2K0 278 aaKnown RBP16.98■□□□□ 0.31
HMGCL-208ENST00000509389 A6NJR5 290 aa16.97■□□□□ 0.31
HMGCL-208ENST00000509389 ARIH2O95376 493 aa16.97■□□□□ 0.31
HMGCL-208ENST00000509389 SUPT20HL2P0C7V6 817 aa16.97■□□□□ 0.31
HMGCL-208ENST00000509389 CYP2C9P11712 490 aa16.97■□□□□ 0.31
HMGCL-208ENST00000509389 QRICH1Q2TAL8 776 aa16.97■□□□□ 0.31
HMGCL-208ENST00000509389 NBPF20Q3BBV1 942 aa16.97■□□□□ 0.31
HMGCL-208ENST00000509389 BRDTQ58F21 947 aaPredicted RBP16.97■□□□□ 0.31
HMGCL-208ENST00000509389 RPUSD2Q8IZ73 545 aaKnown RBP16.97■□□□□ 0.31
HMGCL-208ENST00000509389 SYTL5Q8TDW5 730 aaPredicted RBP16.97■□□□□ 0.31
HMGCL-208ENST00000509389 VWCEQ96DN2 955 aa16.97■□□□□ 0.31
HMGCL-208ENST00000509389 IPO9Q96P70 1041 aaKnown RBP16.97■□□□□ 0.31
HMGCL-208ENST00000509389 TAAR1Q96RJ0 339 aa16.97■□□□□ 0.31
HMGCL-208ENST00000509389 SNX14Q9Y5W7 946 aa16.97■□□□□ 0.31
HMGCL-208ENST00000509389 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
HMGCL-208ENST00000509389 SCN5AQ14524 2016 aa16.96■□□□□ 0.31
HMGCL-208ENST00000509389 KPNA6O60684 536 aa16.96■□□□□ 0.31
HMGCL-208ENST00000509389 PARP1P09874 1014 aaKnown RBP16.96■□□□□ 0.31
HMGCL-208ENST00000509389 TTLL4Q14679 1199 aa16.96■□□□□ 0.31
HMGCL-208ENST00000509389 RAB30Q15771 203 aa16.96■□□□□ 0.31
HMGCL-208ENST00000509389 FAM47CQ5HY64 1035 aa16.96■□□□□ 0.31
HMGCL-208ENST00000509389 RASEFQ8IZ41 740 aa16.96■□□□□ 0.31
HMGCL-208ENST00000509389 PPP1R13LQ8WUF5 828 aa16.96■□□□□ 0.31
HMGCL-208ENST00000509389 CNNM2Q9H8M5 875 aa16.96■□□□□ 0.31
HMGCL-208ENST00000509389 JMJD4Q9H9V9 463 aa16.96■□□□□ 0.31
HMGCL-208ENST00000509389 VAT1LQ9HCJ6 419 aa16.96■□□□□ 0.31
HMGCL-208ENST00000509389 COL20A1Q9P218 1284 aa16.96■□□□□ 0.31
HMGCL-208ENST00000509389 MSRAQ9UJ68 235 aa16.96■□□□□ 0.31
HMGCL-208ENST00000509389 PRUNE2Q8WUY3 3088 aa16.96■□□□□ 0.31
HMGCL-208ENST00000509389 KIAA1217Q5T5P2 1943 aa16.96■□□□□ 0.31
HMGCL-208ENST00000509389 DHX16O60231 1041 aaKnown RBP16.95■□□□□ 0.3
HMGCL-208ENST00000509389 CREB3L3Q68CJ9 461 aa16.95■□□□□ 0.3
HMGCL-208ENST00000509389 CCDC62Q6P9F0 684 aa16.95■□□□□ 0.3
HMGCL-208ENST00000509389 FBXO11Q86XK2 927 aa16.95■□□□□ 0.3
HMGCL-208ENST00000509389 MCF2L2Q86YR7 1114 aa16.95■□□□□ 0.3
HMGCL-208ENST00000509389 USP38Q8NB14 1042 aa16.95■□□□□ 0.3
HMGCL-208ENST00000509389 NSUN6Q8TEA1 469 aaKnown RBP16.95■□□□□ 0.3
HMGCL-208ENST00000509389 UBAC1Q9BSL1 405 aa16.95■□□□□ 0.3
HMGCL-208ENST00000509389 TM6SF1Q9BZW5 370 aa16.95■□□□□ 0.3
HMGCL-208ENST00000509389 PRDM12Q9H4Q4 367 aa16.95■□□□□ 0.3
HMGCL-208ENST00000509389 SLC27A2O14975 620 aa16.94■□□□□ 0.3
HMGCL-208ENST00000509389 IFIT1BQ5T764 474 aaKnown RBP16.94■□□□□ 0.3
HMGCL-208ENST00000509389 NFRKBQ6P4R8 1299 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms