RNA–Protein interactions for RNA: ENST00000509227.1

PAPD4-212, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-212ENST00000509227 CRIP3Q6Q6R5 217 aa6.32□□□□□ -1.4
PAPD4-212ENST00000509227 BTN2A2Q8WVV5 523 aa6.32□□□□□ -1.4
PAPD4-212ENST00000509227 SMARCC1Q92922 1105 aaPredicted RBP6.32□□□□□ -1.4
PAPD4-212ENST00000509227 MRGPRX3Q96LB0 322 aa6.32□□□□□ -1.4
PAPD4-212ENST00000509227 ST7Q9NRC1 585 aa6.32□□□□□ -1.4
PAPD4-212ENST00000509227 PRR13Q9NZ81 148 aa6.32□□□□□ -1.4
PAPD4-212ENST00000509227 WHRNQ9P202 907 aa6.32□□□□□ -1.4
PAPD4-212ENST00000509227 TNFRSF10DQ9UBN6 386 aa6.32□□□□□ -1.4
PAPD4-212ENST00000509227 LIMS1P48059 325 aa6.31□□□□□ -1.4
PAPD4-212ENST00000509227 RAB3GAP1Q15042 981 aa6.31□□□□□ -1.4
PAPD4-212ENST00000509227 RPTNQ6XPR3 784 aa6.31□□□□□ -1.4
PAPD4-212ENST00000509227 CCDC103Q8IW40 242 aa6.31□□□□□ -1.4
PAPD4-212ENST00000509227 DPF3Q92784 378 aa6.31□□□□□ -1.4
PAPD4-212ENST00000509227 CLEC1BQ9P126 229 aa6.31□□□□□ -1.4
PAPD4-212ENST00000509227 RWDD3Q9Y3V2 267 aa6.31□□□□□ -1.4
PAPD4-212ENST00000509227 NOBOXO60393 691 aa6.3□□□□□ -1.4
PAPD4-212ENST00000509227 ARL4AP40617 200 aa6.3□□□□□ -1.4
PAPD4-212ENST00000509227 CBX2Q14781 532 aaPredicted RBP6.3□□□□□ -1.4
PAPD4-212ENST00000509227 USP51Q70EK9 711 aa6.3□□□□□ -1.4
PAPD4-212ENST00000509227 FAM178BQ8IXR5 827 aa6.3□□□□□ -1.4
PAPD4-212ENST00000509227 ADGRG2Q8IZP9 1017 aa6.3□□□□□ -1.4
PAPD4-212ENST00000509227 DDX1Q92499 740 aaKnown RBP6.3□□□□□ -1.4
PAPD4-212ENST00000509227 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.3□□□□□ -1.4
PAPD4-212ENST00000509227 LNPKQ9C0E8 428 aa6.3□□□□□ -1.4
PAPD4-212ENST00000509227 GULP1Q9UBP9 304 aa6.3□□□□□ -1.4
PAPD4-212ENST00000509227 EMC9Q9Y3B6 208 aa6.3□□□□□ -1.4
PAPD4-212ENST00000509227 SIT1Q9Y3P8 196 aa6.3□□□□□ -1.4
PAPD4-212ENST00000509227 TAF6LQ9Y6J9 622 aa6.3□□□□□ -1.4
PAPD4-212ENST00000509227 A0A1B0GTL3 188 aa6.29□□□□□ -1.4
PAPD4-212ENST00000509227 SH3D21A4FU49 640 aa6.29□□□□□ -1.4
PAPD4-212ENST00000509227 FZD7O75084 574 aa6.29□□□□□ -1.4
PAPD4-212ENST00000509227 GJB6O95452 261 aa6.29□□□□□ -1.4
PAPD4-212ENST00000509227 CAPNS1P04632 268 aa6.29□□□□□ -1.4
PAPD4-212ENST00000509227 PFKLP17858 780 aa6.29□□□□□ -1.4
PAPD4-212ENST00000509227 MC3RP41968 323 aa6.29□□□□□ -1.4
PAPD4-212ENST00000509227 SCRN1Q12765 414 aa6.29□□□□□ -1.4
PAPD4-212ENST00000509227 LAPTM5Q13571 262 aa6.29□□□□□ -1.4
PAPD4-212ENST00000509227 CWF19L1Q69YN2 538 aaKnown RBP6.29□□□□□ -1.4
PAPD4-212ENST00000509227 OR6P1Q8NGX9 317 aa6.29□□□□□ -1.4
PAPD4-212ENST00000509227 FNIP1Q8TF40 1166 aa6.29□□□□□ -1.4
PAPD4-212ENST00000509227 LOXL4Q96JB6 756 aa6.29□□□□□ -1.4
PAPD4-212ENST00000509227 AKT3Q9Y243 479 aa6.29□□□□□ -1.4
PAPD4-212ENST00000509227 C2orf71A6NGG8 1288 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 KLF4O43474 513 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 ITGAVP06756 1048 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 THBDP07204 575 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 DBHP09172 617 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 LCP1P13796 627 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 PLS3P13797 630 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 FBLN1P23142 703 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 CYP4F8P98187 520 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 TCEAL1Q15170 157 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 PLEKHN1Q494U1 663 aaPredicted RBP6.28□□□□□ -1.4
PAPD4-212ENST00000509227 GTF2IRD2BQ6EKJ0 949 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 SAPCD2Q86UD0 394 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 GTF2IRD2Q86UP8 949 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 ZNF227Q86WZ6 799 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 NAT16Q8N8M0 369 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 FRS2Q8WU20 508 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 DVL3Q92997 716 aaPredicted RBP6.28□□□□□ -1.4
PAPD4-212ENST00000509227 SPATA32Q96LK8 384 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 MTA3Q9BTC8 594 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 PCED1AQ9H1Q7 454 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 ACTR10Q9NZ32 417 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 PRKAG3Q9UGI9 489 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 SUGT1Q9Y2Z0 365 aa6.28□□□□□ -1.4
PAPD4-212ENST00000509227 A0A087WZG4 1122 aa6.27□□□□□ -1.41
PAPD4-212ENST00000509227 A0A1W2PQ45 241 aaPredicted RBP6.27□□□□□ -1.41
PAPD4-212ENST00000509227 A0A1W2PQY0 241 aa6.27□□□□□ -1.41
PAPD4-212ENST00000509227 C7orf72A4D263 438 aa6.27□□□□□ -1.41
PAPD4-212ENST00000509227 ANKRD34BA5PLL1 514 aa6.27□□□□□ -1.41
PAPD4-212ENST00000509227 WTIPA6NIX2 430 aaPredicted RBP6.27□□□□□ -1.41
PAPD4-212ENST00000509227 SUSD5O60279 629 aa6.27□□□□□ -1.41
PAPD4-212ENST00000509227 PLA2G1BP04054 148 aaKnown RBP6.27□□□□□ -1.41
PAPD4-212ENST00000509227 SSBP05455 408 aaKnown RBP eCLIP6.27□□□□□ -1.41
PAPD4-212ENST00000509227 TGM1P22735 817 aa6.27□□□□□ -1.41
PAPD4-212ENST00000509227 RCSD1Q6JBY9 416 aa6.27□□□□□ -1.41
PAPD4-212ENST00000509227 GALNT18Q6P9A2 607 aa6.27□□□□□ -1.41
PAPD4-212ENST00000509227 SPRED1Q7Z699 444 aa6.27□□□□□ -1.41
PAPD4-212ENST00000509227 KREMEN2Q8NCW0 462 aa6.27□□□□□ -1.41
PAPD4-212ENST00000509227 SH3RF3Q8TEJ3 882 aaPredicted RBP6.27□□□□□ -1.41
PAPD4-212ENST00000509227 COPS5Q92905 334 aa6.27□□□□□ -1.41
PAPD4-212ENST00000509227 DIS3Q9Y2L1 958 aaKnown RBP6.27□□□□□ -1.41
PAPD4-212ENST00000509227 BACE2Q9Y5Z0 518 aa6.27□□□□□ -1.41
PAPD4-212ENST00000509227 GJA9P57773 515 aa6.26□□□□□ -1.41
PAPD4-212ENST00000509227 ZNF200P98182 395 aaPredicted RBP6.26□□□□□ -1.41
PAPD4-212ENST00000509227 NLRP10Q86W26 655 aa6.26□□□□□ -1.41
PAPD4-212ENST00000509227 TRIM59Q8IWR1 403 aa6.26□□□□□ -1.41
PAPD4-212ENST00000509227 BVESQ8NE79 360 aa6.26□□□□□ -1.41
PAPD4-212ENST00000509227 NPLOC4Q8TAT6 608 aa6.26□□□□□ -1.41
PAPD4-212ENST00000509227 PPP1R14AQ96A00 147 aa6.26□□□□□ -1.41
PAPD4-212ENST00000509227 RCC1LQ96I51 464 aaKnown RBP6.26□□□□□ -1.41
PAPD4-212ENST00000509227 SF3B6Q9Y3B4 125 aaKnown RBP6.26□□□□□ -1.41
PAPD4-212ENST00000509227 PPM1BO75688 479 aa6.25□□□□□ -1.41
PAPD4-212ENST00000509227 ATF2P15336 505 aa6.25□□□□□ -1.41
PAPD4-212ENST00000509227 HTRA3P83110 453 aa6.25□□□□□ -1.41
PAPD4-212ENST00000509227 AMPD2Q01433 879 aa6.25□□□□□ -1.41
PAPD4-212ENST00000509227 POU4F1Q01851 419 aa6.25□□□□□ -1.41
PAPD4-212ENST00000509227 TARBP2Q15633 366 aaKnown RBP6.25□□□□□ -1.41
PAPD4-212ENST00000509227 SLC10A6Q3KNW5 377 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms