RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 HOXC12P31275 282 aa6.43□□□□□ -1.38
NFKB1-208ENST00000509165 RAP1GAPP47736 663 aa6.43□□□□□ -1.38
NFKB1-208ENST00000509165 DLG4P78352 724 aa6.43□□□□□ -1.38
NFKB1-208ENST00000509165 TESK1Q15569 626 aa6.43□□□□□ -1.38
NFKB1-208ENST00000509165 RPTNQ6XPR3 784 aa6.43□□□□□ -1.38
NFKB1-208ENST00000509165 ATG14Q6ZNE5 492 aa6.43□□□□□ -1.38
NFKB1-208ENST00000509165 C1orf159Q96HA4 380 aa6.43□□□□□ -1.38
NFKB1-208ENST00000509165 SGPP1Q9BX95 441 aa6.43□□□□□ -1.38
NFKB1-208ENST00000509165 CNTD2Q9H8S5 307 aa6.43□□□□□ -1.38
NFKB1-208ENST00000509165 LRP2BPQ9P2M1 347 aa6.43□□□□□ -1.38
NFKB1-208ENST00000509165 POLA1P09884 1462 aaPredicted RBP6.42□□□□□ -1.38
NFKB1-208ENST00000509165 A0A1W2PQ27 194 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 A0A1W2PQ64 194 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 A0A1W2PQC6 194 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 A0A1W2PQD8 194 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 NUDT19A8MXV4 375 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 ABLIM1O14639 778 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 GLI4P10075 376 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 TACR1P25103 407 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 GRIA2P42262 883 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 GFRA1P56159 465 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 SRSF3P84103 164 aaKnown RBP6.42□□□□□ -1.38
NFKB1-208ENST00000509165 RAB3GAP1Q15042 981 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 INF2Q27J81 1249 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 NBPF6Q5VWK0 638 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 DENND5AQ6IQ26 1287 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 C1QL4Q86Z23 238 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 CCDC103Q8IW40 242 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 CKAP2LQ8IYA6 745 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 DPF3Q92784 378 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 ARMC5Q96C12 935 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 NBPF4Q96M43 638 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 TMEFF2Q9UIK5 374 aaPredicted RBP6.42□□□□□ -1.38
NFKB1-208ENST00000509165 SMG5Q9UPR3 1016 aaKnown RBP6.42□□□□□ -1.38
NFKB1-208ENST00000509165 DNMBPQ6XZF7 1577 aa6.42□□□□□ -1.38
NFKB1-208ENST00000509165 CYBBP04839 570 aa6.41□□□□□ -1.38
NFKB1-208ENST00000509165 MAPKAPK2P49137 400 aa6.41□□□□□ -1.38
NFKB1-208ENST00000509165 PPP2R2AP63151 447 aa6.41□□□□□ -1.38
NFKB1-208ENST00000509165 RBL2Q08999 1139 aa6.41□□□□□ -1.38
NFKB1-208ENST00000509165 NR1I3Q14994 352 aa6.41□□□□□ -1.38
NFKB1-208ENST00000509165 PRSS53Q2L4Q9 553 aa6.41□□□□□ -1.38
NFKB1-208ENST00000509165 PLEKHN1Q494U1 663 aaPredicted RBP6.41□□□□□ -1.38
NFKB1-208ENST00000509165 SLC35F1Q5T1Q4 408 aa6.41□□□□□ -1.38
NFKB1-208ENST00000509165 BICRALQ6AI39 1079 aa6.41□□□□□ -1.38
NFKB1-208ENST00000509165 PAQR3Q6TCH7 311 aa6.41□□□□□ -1.38
NFKB1-208ENST00000509165 ST13P5Q8NFI4 369 aaPredicted RBP6.41□□□□□ -1.38
NFKB1-208ENST00000509165 CCDC140Q96MF4 163 aa6.41□□□□□ -1.38
NFKB1-208ENST00000509165 GULP1Q9UBP9 304 aa6.41□□□□□ -1.38
NFKB1-208ENST00000509165 RWDD3Q9Y3V2 267 aa6.41□□□□□ -1.38
NFKB1-208ENST00000509165 CEP170Q5SW79 1584 aa6.4□□□□□ -1.38
NFKB1-208ENST00000509165 SPATA31D1Q6ZQQ2 1576 aa6.4□□□□□ -1.38
NFKB1-208ENST00000509165 SNRPB2P08579 225 aaKnown RBP6.4□□□□□ -1.38
NFKB1-208ENST00000509165 CDR1P51861 262 aa6.4□□□□□ -1.38
NFKB1-208ENST00000509165 EPHB3P54753 998 aa6.4□□□□□ -1.38
NFKB1-208ENST00000509165 TMEM62Q0P6H9 643 aa6.4□□□□□ -1.38
NFKB1-208ENST00000509165 SERINC3Q13530 473 aa6.4□□□□□ -1.38
NFKB1-208ENST00000509165 ACBD5Q5T8D3 534 aaPredicted RBP6.4□□□□□ -1.38
NFKB1-208ENST00000509165 E4F1Q66K89 784 aaPredicted RBP6.4□□□□□ -1.38
NFKB1-208ENST00000509165 TMEM145Q8NBT3 493 aa6.4□□□□□ -1.38
NFKB1-208ENST00000509165 PLEKHO2Q8TD55 490 aa6.4□□□□□ -1.38
NFKB1-208ENST00000509165 SGSM3Q96HU1 749 aa6.4□□□□□ -1.38
NFKB1-208ENST00000509165 TRIM55Q9BYV6 548 aa6.4□□□□□ -1.38
NFKB1-208ENST00000509165 JAG2Q9Y219 1238 aa6.4□□□□□ -1.38
NFKB1-208ENST00000509165 HCFC2Q9Y5Z7 792 aa6.4□□□□□ -1.38
NFKB1-208ENST00000509165 TCAF2A6NFQ2 919 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 NPHS1O60500 1241 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 CPP00450 1065 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 FBLN1P23142 703 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 CFPP27918 469 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 GTF2F1P35269 517 aaKnown RBP eCLIP6.39□□□□□ -1.39
NFKB1-208ENST00000509165 ECI1P42126 302 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 KCNA10Q16322 511 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 TMEM132EQ6IEE7 984 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 TMC6Q7Z403 805 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 LDHDQ86WU2 507 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 ANKLE2Q86XL3 938 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 LZTR1Q8N653 840 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 ZNF669Q96BR6 464 aaPredicted RBP6.39□□□□□ -1.39
NFKB1-208ENST00000509165 ARHGEF4Q9NR80 690 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 SIRT5Q9NXA8 310 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.39□□□□□ -1.39
NFKB1-208ENST00000509165 PLA2G2DQ9UNK4 145 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 PCDHA5Q9Y5H7 936 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 IRS2Q9Y4H2 1338 aa6.39□□□□□ -1.39
NFKB1-208ENST00000509165 MAGI1Q96QZ7 1491 aaPredicted RBP6.39□□□□□ -1.39
NFKB1-208ENST00000509165 NPIPB6E9PJ23 425 aa6.38□□□□□ -1.39
NFKB1-208ENST00000509165 AGRPO00253 132 aa6.38□□□□□ -1.39
NFKB1-208ENST00000509165 IRS4O14654 1257 aaPredicted RBP6.38□□□□□ -1.39
NFKB1-208ENST00000509165 N4BP3O15049 544 aa6.38□□□□□ -1.39
NFKB1-208ENST00000509165 LINC00310P59036 64 aa6.38□□□□□ -1.39
NFKB1-208ENST00000509165 RASGRF1Q13972 1273 aa6.38□□□□□ -1.39
NFKB1-208ENST00000509165 OLFML2BQ68BL8 750 aa6.38□□□□□ -1.39
NFKB1-208ENST00000509165 IQCEQ6IPM2 695 aa6.38□□□□□ -1.39
NFKB1-208ENST00000509165 ZC3H14Q6PJT7 736 aaKnown RBP6.38□□□□□ -1.39
NFKB1-208ENST00000509165 LCNL1Q6ZST4 164 aa6.38□□□□□ -1.39
NFKB1-208ENST00000509165 IGDCC3Q8IVU1 814 aa6.38□□□□□ -1.39
NFKB1-208ENST00000509165 HIRIP3Q9BW71 556 aaPredicted RBP6.38□□□□□ -1.39
NFKB1-208ENST00000509165 CCDC113Q9H0I3 377 aa6.38□□□□□ -1.39
NFKB1-208ENST00000509165 NPFFR2Q9Y5X5 522 aa6.38□□□□□ -1.39
NFKB1-208ENST00000509165 PPRC1Q5VV67 1664 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms