RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 GPCPD1Q9NPB8 672 aa11.77□□□□□ -0.53
SH3D21-206ENST00000508854 MTCH2Q9Y6C9 303 aa11.77□□□□□ -0.53
SH3D21-206ENST00000508854 DDX49Q9Y6V7 483 aaKnown RBP11.77□□□□□ -0.53
SH3D21-206ENST00000508854 TXNP10599 105 aaKnown RBP11.76□□□□□ -0.53
SH3D21-206ENST00000508854 EDNRBP24530 442 aa11.76□□□□□ -0.53
SH3D21-206ENST00000508854 RPS6P62753 249 aaKnown RBP11.76□□□□□ -0.53
SH3D21-206ENST00000508854 CCDC178Q5BJE1 867 aa11.76□□□□□ -0.53
SH3D21-206ENST00000508854 RRP12Q5JTH9 1297 aaKnown RBP11.76□□□□□ -0.53
SH3D21-206ENST00000508854 TMEM63BQ5T3F8 832 aa11.76□□□□□ -0.53
SH3D21-206ENST00000508854 GPATCH4Q5T3I0 446 aaKnown RBP11.76□□□□□ -0.53
SH3D21-206ENST00000508854 HERC6Q8IVU3 1022 aa11.76□□□□□ -0.53
SH3D21-206ENST00000508854 AFAP1L1Q8TED9 768 aa11.76□□□□□ -0.53
SH3D21-206ENST00000508854 CLEC4DQ8WXI8 215 aa11.76□□□□□ -0.53
SH3D21-206ENST00000508854 RNF41Q9H4P4 317 aaPredicted RBP11.76□□□□□ -0.53
SH3D21-206ENST00000508854 INCENPQ9NQS7 918 aa11.76□□□□□ -0.53
SH3D21-206ENST00000508854 ARIH1Q9Y4X5 557 aaPredicted RBP11.76□□□□□ -0.53
SH3D21-206ENST00000508854 TLL1O43897 1013 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 FGAP02671 866 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 PDHBP11177 359 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 PTGS1P23219 599 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 PLA2G5P39877 138 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 MFAP1P55081 439 aaKnown RBP11.75□□□□□ -0.53
SH3D21-206ENST00000508854 PTGISQ16647 500 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 MCMDC2Q4G0Z9 681 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 SLC30A10Q6XR72 485 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 ARNTL2Q8WYA1 636 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 HLA-CQ95604 372 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 VWCEQ96DN2 955 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 LMCD1Q9NZU5 365 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 SCN10AQ9Y5Y9 1956 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 ZMYM6O95789 1325 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 FRMPD2Q68DX3 1309 aaPredicted RBP11.75□□□□□ -0.53
SH3D21-206ENST00000508854 XIRP2A4UGR9 3374 aa11.75□□□□□ -0.53
SH3D21-206ENST00000508854 FOXP2O15409 715 aa11.74□□□□□ -0.53
SH3D21-206ENST00000508854 EFCAB14O75071 495 aa11.74□□□□□ -0.53
SH3D21-206ENST00000508854 CASTP20810 708 aaKnown RBP11.74□□□□□ -0.53
SH3D21-206ENST00000508854 TFF2Q03403 129 aa11.74□□□□□ -0.53
SH3D21-206ENST00000508854 TAP1Q03518 808 aa11.74□□□□□ -0.53
SH3D21-206ENST00000508854 ZNF543Q08ER8 600 aa11.74□□□□□ -0.53
SH3D21-206ENST00000508854 VPS53Q5VIR6 699 aa11.74□□□□□ -0.53
SH3D21-206ENST00000508854 MFSD6Q6ZSS7 791 aa11.74□□□□□ -0.53
SH3D21-206ENST00000508854 SESTD1Q86VW0 696 aa11.74□□□□□ -0.53
SH3D21-206ENST00000508854 MCF2L2Q86YR7 1114 aa11.74□□□□□ -0.53
SH3D21-206ENST00000508854 NSUN6Q8TEA1 469 aaKnown RBP11.74□□□□□ -0.53
SH3D21-206ENST00000508854 IWS1Q96ST2 819 aa11.74□□□□□ -0.53
SH3D21-206ENST00000508854 ZBED2Q9BTP6 218 aa11.74□□□□□ -0.53
SH3D21-206ENST00000508854 LCTP09848 1927 aa11.74□□□□□ -0.53
SH3D21-206ENST00000508854 REV3LO60673 3130 aa11.73□□□□□ -0.53
SH3D21-206ENST00000508854 ABCB11O95342 1321 aa11.73□□□□□ -0.53
SH3D21-206ENST00000508854 GH1P01241 217 aa11.73□□□□□ -0.53
SH3D21-206ENST00000508854 SNHG28P0DPA3 235 aa11.73□□□□□ -0.53
SH3D21-206ENST00000508854 SELPP16109 830 aa11.73□□□□□ -0.53
SH3D21-206ENST00000508854 CHMP4BP1P59074 171 aa11.73□□□□□ -0.53
SH3D21-206ENST00000508854 DGKDQ16760 1214 aa11.73□□□□□ -0.53
SH3D21-206ENST00000508854 ANKRD45Q5TZF3 282 aa11.73□□□□□ -0.53
SH3D21-206ENST00000508854 RASGRP2Q7LDG7 609 aa11.73□□□□□ -0.53
SH3D21-206ENST00000508854 DGKHQ86XP1 1220 aa11.73□□□□□ -0.53
SH3D21-206ENST00000508854 OTUD7AQ8TE49 926 aaPredicted RBP11.73□□□□□ -0.53
SH3D21-206ENST00000508854 ESR2Q92731 530 aa11.73□□□□□ -0.53
SH3D21-206ENST00000508854 KATNAL1Q9BW62 490 aa11.73□□□□□ -0.53
SH3D21-206ENST00000508854 CERS4Q9HA82 394 aa11.73□□□□□ -0.53
SH3D21-206ENST00000508854 HCN4Q9Y3Q4 1203 aa11.73□□□□□ -0.53
SH3D21-206ENST00000508854 SCN5AQ14524 2016 aa11.72□□□□□ -0.53
SH3D21-206ENST00000508854 TCF20Q9UGU0 1960 aaKnown RBP11.72□□□□□ -0.53
SH3D21-206ENST00000508854 ABHD14A-ACY1A0A1B0GW23 586 aa11.72□□□□□ -0.53
SH3D21-206ENST00000508854 RFXAPO00287 272 aa11.72□□□□□ -0.53
SH3D21-206ENST00000508854 HSPD1P10809 573 aaKnown RBP11.72□□□□□ -0.53
SH3D21-206ENST00000508854 KCNQ1P51787 676 aa11.72□□□□□ -0.53
SH3D21-206ENST00000508854 STXBP2Q15833 593 aa11.72□□□□□ -0.53
SH3D21-206ENST00000508854 USH1GQ495M9 461 aa11.72□□□□□ -0.53
SH3D21-206ENST00000508854 CCDC62Q6P9F0 684 aa11.72□□□□□ -0.53
SH3D21-206ENST00000508854 CNKSR3Q6P9H4 555 aa11.72□□□□□ -0.53
SH3D21-206ENST00000508854 LRRC8DQ7L1W4 858 aa11.72□□□□□ -0.53
SH3D21-206ENST00000508854 IQCA1Q86XH1 822 aa11.72□□□□□ -0.53
SH3D21-206ENST00000508854 C7orf31Q8N865 590 aa11.72□□□□□ -0.53
SH3D21-206ENST00000508854 RAD9AQ99638 391 aa11.72□□□□□ -0.53
SH3D21-206ENST00000508854 PCDHB15Q9Y5E8 787 aa11.72□□□□□ -0.53
SH3D21-206ENST00000508854 TANC1Q9C0D5 1861 aa11.72□□□□□ -0.53
SH3D21-206ENST00000508854 PRRC2BQ5JSZ5 2229 aaKnown RBP11.71□□□□□ -0.53
SH3D21-206ENST00000508854 ZNF213O14771 459 aa11.71□□□□□ -0.53
SH3D21-206ENST00000508854 EIF3JO75822 258 aaKnown RBP11.71□□□□□ -0.53
SH3D21-206ENST00000508854 MMP3P08254 477 aa11.71□□□□□ -0.53
SH3D21-206ENST00000508854 WDR5P61964 334 aaKnown RBP11.71□□□□□ -0.53
SH3D21-206ENST00000508854 RBL2Q08999 1139 aa11.71□□□□□ -0.53
SH3D21-206ENST00000508854 GRB10Q13322 594 aa11.71□□□□□ -0.53
SH3D21-206ENST00000508854 LAMC2Q13753 1193 aa11.71□□□□□ -0.53
SH3D21-206ENST00000508854 IKBKEQ14164 716 aa11.71□□□□□ -0.53
SH3D21-206ENST00000508854 KCNV1Q6PIU1 500 aa11.71□□□□□ -0.53
SH3D21-206ENST00000508854 SEPT14Q6ZU15 432 aa11.71□□□□□ -0.53
SH3D21-206ENST00000508854 AFG1LQ8WV93 481 aa11.71□□□□□ -0.53
SH3D21-206ENST00000508854 COPS5Q92905 334 aa11.71□□□□□ -0.53
SH3D21-206ENST00000508854 EMID1Q96A84 441 aaPredicted RBP11.71□□□□□ -0.53
SH3D21-206ENST00000508854 NECAB3Q96P71 396 aaPredicted RBP11.71□□□□□ -0.53
SH3D21-206ENST00000508854 CRBNQ96SW2 442 aa11.71□□□□□ -0.53
SH3D21-206ENST00000508854 RMDN3Q96TC7 470 aa11.71□□□□□ -0.53
SH3D21-206ENST00000508854 MRPL11Q9Y3B7 192 aaKnown RBP11.71□□□□□ -0.53
SH3D21-206ENST00000508854 CCDC171Q6TFL3 1326 aa11.7□□□□□ -0.54
SH3D21-206ENST00000508854 SALL3Q9BXA9 1300 aa11.7□□□□□ -0.54
SH3D21-206ENST00000508854 CXCL10P02778 98 aa11.7□□□□□ -0.54
SH3D21-206ENST00000508854 PDE1AP54750 535 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms