RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 CNGA1P29973 690 aa10.42□□□□□ -0.74
COL4A3BP-206ENST00000508809 WDR78Q5VTH9 848 aa10.42□□□□□ -0.74
COL4A3BP-206ENST00000508809 C1orf53Q5VUE5 145 aa10.42□□□□□ -0.74
COL4A3BP-206ENST00000508809 DPP9Q86TI2 863 aa10.42□□□□□ -0.74
COL4A3BP-206ENST00000508809 ABRAQ8N0Z2 381 aa10.42□□□□□ -0.74
COL4A3BP-206ENST00000508809 MB21D1Q8N884 522 aa10.42□□□□□ -0.74
COL4A3BP-206ENST00000508809 COL25A1Q9BXS0 654 aaPredicted RBP10.42□□□□□ -0.74
COL4A3BP-206ENST00000508809 NIFKQ9BYG3 293 aaKnown RBP10.42□□□□□ -0.74
COL4A3BP-206ENST00000508809 SPATC1LQ9H0A9 340 aa10.42□□□□□ -0.74
COL4A3BP-206ENST00000508809 MYO9BQ13459 2157 aa10.42□□□□□ -0.74
COL4A3BP-206ENST00000508809 F11P03951 625 aa10.41□□□□□ -0.74
COL4A3BP-206ENST00000508809 POLR3DP05423 398 aaPredicted RBP10.41□□□□□ -0.74
COL4A3BP-206ENST00000508809 RLBP1P12271 317 aa10.41□□□□□ -0.74
COL4A3BP-206ENST00000508809 ERCC3P19447 782 aa10.41□□□□□ -0.74
COL4A3BP-206ENST00000508809 PHKA2P46019 1235 aa10.41□□□□□ -0.74
COL4A3BP-206ENST00000508809 KIAA1755Q5JYT7 1200 aa10.41□□□□□ -0.74
COL4A3BP-206ENST00000508809 GJC2Q5T442 439 aaPredicted RBP10.41□□□□□ -0.74
COL4A3BP-206ENST00000508809 SIAH1Q8IUQ4 282 aa10.41□□□□□ -0.74
COL4A3BP-206ENST00000508809 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.41□□□□□ -0.74
COL4A3BP-206ENST00000508809 TRIM22Q8IYM9 498 aa10.41□□□□□ -0.74
COL4A3BP-206ENST00000508809 PGBD3Q8N328 593 aa10.41□□□□□ -0.74
COL4A3BP-206ENST00000508809 MROH8Q9H579 483 aa10.41□□□□□ -0.74
COL4A3BP-206ENST00000508809 DNAAF2Q9NVR5 837 aaKnown RBP10.41□□□□□ -0.74
COL4A3BP-206ENST00000508809 PRKAG2Q9UGJ0 569 aa10.41□□□□□ -0.74
COL4A3BP-206ENST00000508809 PARP14Q460N5 1801 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 TTC28Q96AY4 2481 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 TCRBV5S4A2TA0A5A2 114 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 PALM3A6NDB9 673 aaPredicted RBP10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 FAM181BA6NEQ2 426 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 PDE6AP16499 860 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 TTF1Q15361 905 aaPredicted RBP10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 SHHQ15465 462 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 C4orf17Q53FE4 359 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 LCE2CQ5TA81 110 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 CEP85Q6P2H3 762 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 TMEM179Q6ZVK1 233 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 AACSQ86V21 672 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 ERC1Q8IUD2 1116 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 TPCN2Q8NHX9 752 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 CRNKL1Q9BZJ0 848 aaKnown RBP10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 PPP1R12CQ9BZL4 782 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 SEMA6BQ9H3T3 888 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 DCP1AQ9NPI6 582 aaPredicted RBP10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 MCM9Q9NXL9 1143 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 SLC5A4Q9NY91 659 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 NRBP1Q9UHY1 535 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 ADAMTS5Q9UNA0 930 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 MAFBQ9Y5Q3 323 aaPredicted RBP10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 A0A0G2JMZ2 1700 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 MYH8P13535 1937 aa10.4□□□□□ -0.74
COL4A3BP-206ENST00000508809 NAV1Q8NEY1 1877 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 A6NJY4 79 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 TMEM229AB2RXF0 380 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 KBTBD13C9JR72 458 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 LRRC41Q15345 812 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 PRAMEF19Q5SWL8 479 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 C9orf50Q5SZB4 431 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 SLC9C2Q5TAH2 1124 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 ITPRIPQ8IWB1 547 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 MAML3Q96JK9 1138 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 TRERF1Q96PN7 1200 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 CDX2Q99626 313 aaPredicted RBP10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 ZMYND15Q9H091 742 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 SWAP70Q9UH65 585 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 ATP11BQ9Y2G3 1177 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 TMX2Q9Y320 296 aa10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 BAZ2AQ9UIF9 1905 aaKnown RBP10.39□□□□□ -0.75
COL4A3BP-206ENST00000508809 ZNF532Q9HCE3 1301 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 COL11A1P12107 1806 aaPredicted RBP10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 TRIM43BA6NCK2 446 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 MPHOSPH10O00566 681 aaKnown RBP10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 SLC25A27O95847 323 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 ADCYAP1R1P41586 468 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 PLA2G4AP47712 749 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 SMAD3P84022 425 aaKnown RBP10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 TRIM60Q495X7 471 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 HSP90AB4PQ58FF6 505 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 ANO1Q5XXA6 986 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 FTSJ3Q8IY81 847 aaKnown RBP10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 RHPN1Q8TCX5 695 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 SDR42E1Q8WUS8 393 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 BADQ92934 168 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 TRIM43Q96BQ3 446 aaPredicted RBP10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 ATG4CQ96DT6 458 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 FAM161BQ96MY7 647 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 TANGO6Q9C0B7 1094 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 VCPKMTQ9H867 229 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 PDLIM7Q9NR12 457 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 EXOC6BQ9Y2D4 811 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 PLXNA1Q9UIW2 1896 aa10.38□□□□□ -0.75
COL4A3BP-206ENST00000508809 CDK2AP1O14519 115 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 FLOT1O75955 427 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 CYP2D6P10635 497 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 FCER1AP12319 257 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 RASA1P20936 1047 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 TLE2Q04725 743 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 TMEM132BQ14DG7 1078 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 FAM47AQ5JRC9 791 aa10.37□□□□□ -0.75
COL4A3BP-206ENST00000508809 NCAPG2Q86XI2 1143 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms