RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 LZTR1Q8N653 840 aa6.43□□□□□ -1.38
PDLIM5-211ENST00000508531 RNF38Q9H0F5 515 aa6.43□□□□□ -1.38
PDLIM5-211ENST00000508531 GULP1Q9UBP9 304 aa6.43□□□□□ -1.38
PDLIM5-211ENST00000508531 CLASP1Q7Z460 1538 aa6.43□□□□□ -1.38
PDLIM5-211ENST00000508531 SNAPC4Q5SXM2 1469 aa6.42□□□□□ -1.38
PDLIM5-211ENST00000508531 RAD54L2Q9Y4B4 1467 aa6.42□□□□□ -1.38
PDLIM5-211ENST00000508531 PPP1R11O60927 126 aaPredicted RBP6.42□□□□□ -1.38
PDLIM5-211ENST00000508531 CELA3BP08861 270 aa6.42□□□□□ -1.38
PDLIM5-211ENST00000508531 NASPP49321 788 aaPredicted RBP6.42□□□□□ -1.38
PDLIM5-211ENST00000508531 HDLBPQ00341 1268 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-211ENST00000508531 ERICH6BQ5W0A0 696 aa6.42□□□□□ -1.38
PDLIM5-211ENST00000508531 NT5DC4Q86YG4 428 aa6.42□□□□□ -1.38
PDLIM5-211ENST00000508531 ARHGEF39Q8N4T4 335 aa6.42□□□□□ -1.38
PDLIM5-211ENST00000508531 SHDQ96IW2 340 aa6.42□□□□□ -1.38
PDLIM5-211ENST00000508531 TEPSINQ96N21 525 aa6.42□□□□□ -1.38
PDLIM5-211ENST00000508531 PAMP19021 973 aa6.41□□□□□ -1.38
PDLIM5-211ENST00000508531 PMLP29590 882 aa6.41□□□□□ -1.38
PDLIM5-211ENST00000508531 HTRA3P83110 453 aa6.41□□□□□ -1.38
PDLIM5-211ENST00000508531 GRB10Q13322 594 aa6.41□□□□□ -1.38
PDLIM5-211ENST00000508531 KIAA1211LQ6NV74 962 aa6.41□□□□□ -1.38
PDLIM5-211ENST00000508531 LIPIQ6XZB0 460 aa6.41□□□□□ -1.38
PDLIM5-211ENST00000508531 FRMD5Q7Z6J6 570 aa6.41□□□□□ -1.38
PDLIM5-211ENST00000508531 ZNF526Q8TF50 670 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-211ENST00000508531 CPLX3Q8WVH0 158 aa6.41□□□□□ -1.38
PDLIM5-211ENST00000508531 TSPAN17Q96FV3 270 aa6.41□□□□□ -1.38
PDLIM5-211ENST00000508531 RCC1LQ96I51 464 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-211ENST00000508531 SPATA25Q9BR10 227 aa6.41□□□□□ -1.38
PDLIM5-211ENST00000508531 ERCC6L2Q5T890 1561 aa6.4□□□□□ -1.38
PDLIM5-211ENST00000508531 HECW2Q9P2P5 1572 aa6.4□□□□□ -1.38
PDLIM5-211ENST00000508531 NPHP3-ACAD11A0A0J9YXS1 232 aa6.4□□□□□ -1.38
PDLIM5-211ENST00000508531 GJA8P48165 433 aa6.4□□□□□ -1.38
PDLIM5-211ENST00000508531 VHLLQ6RSH7 139 aa6.4□□□□□ -1.38
PDLIM5-211ENST00000508531 PRRT2Q7Z6L0 340 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-211ENST00000508531 SAPCD2Q86UD0 394 aa6.4□□□□□ -1.38
PDLIM5-211ENST00000508531 MTA3Q9BTC8 594 aa6.4□□□□□ -1.38
PDLIM5-211ENST00000508531 KRTAP4-5Q9BYR2 181 aa6.4□□□□□ -1.38
PDLIM5-211ENST00000508531 APEX2Q9UBZ4 518 aa6.4□□□□□ -1.38
PDLIM5-211ENST00000508531 NUDT5Q9UKK9 219 aa6.4□□□□□ -1.38
PDLIM5-211ENST00000508531 AKT3Q9Y243 479 aa6.4□□□□□ -1.38
PDLIM5-211ENST00000508531 SYNJ1O43426 1573 aa6.4□□□□□ -1.39
PDLIM5-211ENST00000508531 PRICKLE3O43900 615 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-211ENST00000508531 NT5DC1Q5TFE4 455 aa6.39□□□□□ -1.39
PDLIM5-211ENST00000508531 B3GNT8Q7Z7M8 397 aa6.39□□□□□ -1.39
PDLIM5-211ENST00000508531 FAM169BQ8N8A8 192 aa6.39□□□□□ -1.39
PDLIM5-211ENST00000508531 ZNF513Q8N8E2 541 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-211ENST00000508531 NETO2Q8NC67 525 aa6.39□□□□□ -1.39
PDLIM5-211ENST00000508531 SMARCC2Q8TAQ2 1214 aa6.39□□□□□ -1.39
PDLIM5-211ENST00000508531 USP33Q8TEY7 942 aa6.39□□□□□ -1.39
PDLIM5-211ENST00000508531 MRRFQ96E11 262 aaKnown RBP6.39□□□□□ -1.39
PDLIM5-211ENST00000508531 PEX11GQ96HA9 241 aa6.39□□□□□ -1.39
PDLIM5-211ENST00000508531 CLEC1BQ9P126 229 aa6.39□□□□□ -1.39
PDLIM5-211ENST00000508531 DISP3Q9P2K9 1392 aa6.39□□□□□ -1.39
PDLIM5-211ENST00000508531 SYNJ2O15056 1496 aa6.39□□□□□ -1.39
PDLIM5-211ENST00000508531 C7orf72A4D263 438 aa6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 ANKRD34BA5PLL1 514 aa6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 NPHS1O60500 1241 aa6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 KCNH1O95259 989 aa6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 FUCA1P04066 466 aa6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 CASP7P55210 303 aa6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 DLX2Q07687 328 aaPredicted RBP6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 RTP5Q14D33 572 aa6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 WWC2Q6AWC2 1192 aa6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 NOX5Q96PH1 765 aa6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 BDH2Q9BUT1 245 aa6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 USP40Q9NVE5 1235 aa6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 SIT1Q9Y3P8 196 aa6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 SOGA1O94964 1423 aa6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 TARBP1Q13395 1621 aaKnown RBP6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 KIF13AQ9H1H9 1805 aa6.38□□□□□ -1.39
PDLIM5-211ENST00000508531 ADGRL1O94910 1474 aa6.37□□□□□ -1.39
PDLIM5-211ENST00000508531 TRBV23OR9-2A0A075B6M9 112 aa6.37□□□□□ -1.39
PDLIM5-211ENST00000508531 SH3D21A4FU49 640 aa6.37□□□□□ -1.39
PDLIM5-211ENST00000508531 KRTAP10-2P60368 255 aa6.37□□□□□ -1.39
PDLIM5-211ENST00000508531 PLP2Q04941 152 aa6.37□□□□□ -1.39
PDLIM5-211ENST00000508531 SCRN1Q12765 414 aa6.37□□□□□ -1.39
PDLIM5-211ENST00000508531 MBLAC2Q68D91 279 aa6.37□□□□□ -1.39
PDLIM5-211ENST00000508531 ACBD3Q9H3P7 528 aa6.37□□□□□ -1.39
PDLIM5-211ENST00000508531 GPRC5CQ9NQ84 441 aa6.37□□□□□ -1.39
PDLIM5-211ENST00000508531 EMC9Q9Y3B6 208 aa6.37□□□□□ -1.39
PDLIM5-211ENST00000508531 ZBTB7AO95365 584 aa6.36□□□□□ -1.39
PDLIM5-211ENST00000508531 NTRK1P04629 796 aa6.36□□□□□ -1.39
PDLIM5-211ENST00000508531 PLS3P13797 630 aa6.36□□□□□ -1.39
PDLIM5-211ENST00000508531 SLC9A5Q14940 896 aa6.36□□□□□ -1.39
PDLIM5-211ENST00000508531 BVESQ8NE79 360 aa6.36□□□□□ -1.39
PDLIM5-211ENST00000508531 PPP1R14AQ96A00 147 aa6.36□□□□□ -1.39
PDLIM5-211ENST00000508531 ANAPC16Q96DE5 110 aa6.36□□□□□ -1.39
PDLIM5-211ENST00000508531 SEC16BQ96JE7 1060 aa6.36□□□□□ -1.39
PDLIM5-211ENST00000508531 APBA2Q99767 749 aa6.36□□□□□ -1.39
PDLIM5-211ENST00000508531 LGR4Q9BXB1 951 aa6.36□□□□□ -1.39
PDLIM5-211ENST00000508531 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.36□□□□□ -1.39
PDLIM5-211ENST00000508531 JAG2Q9Y219 1238 aa6.36□□□□□ -1.39
PDLIM5-211ENST00000508531 POLA1P09884 1462 aaPredicted RBP6.35□□□□□ -1.39
PDLIM5-211ENST00000508531 NFKB2Q00653 900 aa6.35□□□□□ -1.39
PDLIM5-211ENST00000508531 CACNB2Q08289 660 aaPredicted RBP6.35□□□□□ -1.39
PDLIM5-211ENST00000508531 UBXN11Q5T124 520 aa6.35□□□□□ -1.39
PDLIM5-211ENST00000508531 FERMT3Q86UX7 667 aa6.35□□□□□ -1.39
PDLIM5-211ENST00000508531 CARFQ8N187 725 aa6.35□□□□□ -1.39
PDLIM5-211ENST00000508531 CPA5Q8WXQ8 436 aa6.35□□□□□ -1.39
PDLIM5-211ENST00000508531 COPS5Q92905 334 aa6.35□□□□□ -1.39
PDLIM5-211ENST00000508531 ZBTB8AQ96BR9 441 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms