RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 PLEKHF1Q96S99 279 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 IWS1Q96ST2 819 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 TRIM55Q9BYV6 548 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 ARMT1Q9H993 441 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 MRPL44Q9H9J2 332 aaKnown RBP7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 IFT122Q9HBG6 1241 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 HPCAL4Q9UM19 191 aa7.95□□□□□ -1.14
UBE2D3-224ENST00000508474 IPO5O00410 1097 aaKnown RBP7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 RNMTO43148 476 aaKnown RBP7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 TRPA1O75762 1119 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 GCNT3O95395 438 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 LARGE1O95461 756 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 OR52Z1P0C646 297 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 CCNE1P24864 410 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 ADD1P35611 737 aaKnown RBP7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 GARSP41250 739 aaKnown RBP7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 IRAK1P51617 712 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 OCA2Q04671 838 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 ASPHQ12797 758 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 NECTIN1Q15223 517 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 PUM3Q15397 648 aaKnown RBP7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 ARHGAP44Q17R89 818 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 C16orf87Q6PH81 154 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 OSCARQ8IYS5 282 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 AGGF1Q8N302 714 aaeCLIP7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 LRRC37BQ96QE4 947 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 ALDH8A1Q9H2A2 487 aaPredicted RBP7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 TAF1DQ9H5J8 278 aaPredicted RBP7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 CHCHD3Q9NX63 227 aaKnown RBP7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 MAST1Q9Y2H9 1570 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 GRIN2AQ12879 1464 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 MAGI2Q86UL8 1455 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 KDRP35968 1356 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 FTCDO95954 541 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 EAF2Q96CJ1 260 aaPredicted RBP7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 TRIM11Q96F44 468 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 ETNK1Q9HBU6 452 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 SLC40A1Q9NP59 571 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 ZFP69BQ9UJL9 534 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 FHOD1Q9Y613 1164 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 H0Y3Z8 333 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 DIAPH2O60879 1101 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 DDAH1O94760 285 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 CAV1Q03135 178 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 PTGDRQ13258 359 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 ADAM9Q13443 819 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 GCKRQ14397 625 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 GRAMD1BQ3KR37 738 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 NAA35Q5VZE5 725 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 PPP1R2P3Q6NXS1 205 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 ANO5Q75V66 913 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 UNC5CLQ8IV45 518 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 ZNF579Q8NAF0 562 aaKnown RBP7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 SGSM3Q96HU1 749 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 ANKRD27Q96NW4 1050 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 RNF26Q9BY78 433 aaPredicted RBP7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 NDE1Q9NXR1 346 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 NCOA3Q9Y6Q9 1424 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 ABCA5Q8WWZ7 1642 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 CDR2Q01850 454 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 BFSP1Q12934 665 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 SEMA3FQ13275 785 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 PLS1Q14651 629 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 HADHQ16836 314 aaKnown RBP7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 GPIHBP1Q8IV16 184 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 GDAP1Q8TB36 358 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 KCNV2Q8TDN2 545 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 CDKL2Q92772 493 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 IL17RAQ96F46 866 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 WDR24Q96S15 920 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 EPC1Q9H2F5 836 aa7.94□□□□□ -1.14
UBE2D3-224ENST00000508474 CLASP1Q7Z460 1538 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 A0A087WWV3 80 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 MAN1A2O60476 641 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 IFNB1P01574 187 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 PCP11498 1178 aaKnown RBP7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 CTDSPL2Q05D32 466 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 FAM26FQ5R3K3 315 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 AGBL2Q5U5Z8 902 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 ADAT2Q7Z6V5 191 aaKnown RBP7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 REXO1Q8N1G1 1221 aaKnown RBP7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 MPHOSPH6Q99547 160 aaKnown RBP7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 PFDN4Q9NQP4 134 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 ZC4H2Q9NQZ6 224 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 PANK4Q9NVE7 773 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 STK17AQ9UEE5 414 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 KCNG1Q9UIX4 513 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 ARHGEF35A5YM69 484 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 HAUS5O94927 633 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 SNUPNO95149 360 aaKnown RBP7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 FAM107AO95990 144 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 CYP21A2P08686 494 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 SLCO1A2P46721 670 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 MDM2Q00987 491 aaPredicted RBP7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 RASA3Q14644 834 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 SGO2Q562F6 1265 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 MYCT1Q8N699 235 aa7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 RPGRQ92834 1020 aaKnown RBP7.93□□□□□ -1.14
UBE2D3-224ENST00000508474 TRAIPQ9BWF2 469 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms