RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 Q9Y3F1 56 aa17.41■□□□□ 0.38
TRIO-211ENST00000508343 MYADML2A6NDP7 307 aa17.4■□□□□ 0.38
TRIO-211ENST00000508343 EIF5BO60841 1220 aaKnown RBP17.4■□□□□ 0.38
TRIO-211ENST00000508343 HOXA13P31271 388 aaPredicted RBP17.4■□□□□ 0.38
TRIO-211ENST00000508343 ACLYP53396 1101 aa17.4■□□□□ 0.38
TRIO-211ENST00000508343 APOBRQ0VD83 1088 aa17.4■□□□□ 0.38
TRIO-211ENST00000508343 PPP2R5BQ15173 497 aa17.4■□□□□ 0.38
TRIO-211ENST00000508343 STXBP2Q15833 593 aa17.4■□□□□ 0.38
TRIO-211ENST00000508343 DUSP28Q4G0W2 176 aa17.4■□□□□ 0.38
TRIO-211ENST00000508343 GNASQ5JWF2 1037 aa17.4■□□□□ 0.38
TRIO-211ENST00000508343 RUFY3Q7L099 469 aa17.4■□□□□ 0.38
TRIO-211ENST00000508343 BRF1Q92994 677 aa17.4■□□□□ 0.38
TRIO-211ENST00000508343 AGXT2Q9BYV1 514 aa17.4■□□□□ 0.38
TRIO-211ENST00000508343 TM6SF1Q9BZW5 370 aa17.4■□□□□ 0.38
TRIO-211ENST00000508343 ZSWIM6Q9HCJ5 1215 aa17.4■□□□□ 0.38
TRIO-211ENST00000508343 PXMP2Q9NR77 195 aa17.4■□□□□ 0.38
TRIO-211ENST00000508343 NAP1L2Q9ULW6 460 aaPredicted RBP17.4■□□□□ 0.38
TRIO-211ENST00000508343 A0A1W2PQ45 241 aaPredicted RBP17.39■□□□□ 0.37
TRIO-211ENST00000508343 A0A1W2PQY0 241 aa17.39■□□□□ 0.37
TRIO-211ENST00000508343 GOLGA8AA7E2F4 631 aa17.39■□□□□ 0.37
TRIO-211ENST00000508343 GOLGA8BA8MQT2 603 aa17.39■□□□□ 0.37
TRIO-211ENST00000508343 CTAGE5O15320 804 aa17.39■□□□□ 0.37
TRIO-211ENST00000508343 DYNC1LI2O43237 492 aaPredicted RBP17.39■□□□□ 0.37
TRIO-211ENST00000508343 EIF2AK2P19525 551 aaKnown RBP17.39■□□□□ 0.37
TRIO-211ENST00000508343 IRX5P78411 483 aaPredicted RBP17.39■□□□□ 0.37
TRIO-211ENST00000508343 SNX17Q15036 470 aa17.39■□□□□ 0.37
TRIO-211ENST00000508343 TMEM63BQ5T3F8 832 aa17.39■□□□□ 0.37
TRIO-211ENST00000508343 C1orf53Q5VUE5 145 aa17.39■□□□□ 0.37
TRIO-211ENST00000508343 TLK2Q86UE8 772 aa17.39■□□□□ 0.37
TRIO-211ENST00000508343 SCFD2Q8WU76 684 aa17.39■□□□□ 0.37
TRIO-211ENST00000508343 CYP46A1Q9Y6A2 500 aa17.39■□□□□ 0.37
TRIO-211ENST00000508343 DNAH12Q6ZR08 3092 aa17.39■□□□□ 0.37
TRIO-211ENST00000508343 ALPK3Q96L96 1907 aa17.39■□□□□ 0.37
TRIO-211ENST00000508343 CCDC196A0A1B0GTZ2 297 aa17.38■□□□□ 0.37
TRIO-211ENST00000508343 hCG_1642624A0A1W2PR95 340 aa17.38■□□□□ 0.37
TRIO-211ENST00000508343 EIF3JO75822 258 aaKnown RBP17.38■□□□□ 0.37
TRIO-211ENST00000508343 ASGR1P07306 291 aa17.38■□□□□ 0.37
TRIO-211ENST00000508343 NR3C2P08235 984 aa17.38■□□□□ 0.37
TRIO-211ENST00000508343 METAP2P50579 478 aaKnown RBP eCLIP17.38■□□□□ 0.37
TRIO-211ENST00000508343 RTP1P59025 263 aa17.38■□□□□ 0.37
TRIO-211ENST00000508343 FAM217BQ9NTX9 383 aaPredicted RBP17.38■□□□□ 0.37
TRIO-211ENST00000508343 NKRFO15226 690 aaKnown RBP eCLIP17.37■□□□□ 0.37
TRIO-211ENST00000508343 TXNP10599 105 aaKnown RBP17.37■□□□□ 0.37
TRIO-211ENST00000508343 PTGS1P23219 599 aa17.37■□□□□ 0.37
TRIO-211ENST00000508343 CDC27P30260 824 aa17.37■□□□□ 0.37
TRIO-211ENST00000508343 BEX3Q00994 111 aa17.37■□□□□ 0.37
TRIO-211ENST00000508343 FUT2Q10981 343 aa17.37■□□□□ 0.37
TRIO-211ENST00000508343 TTLL4Q14679 1199 aa17.37■□□□□ 0.37
TRIO-211ENST00000508343 FSCN1Q16658 493 aaKnown RBP17.37■□□□□ 0.37
TRIO-211ENST00000508343 FCHSD1Q86WN1 690 aa17.37■□□□□ 0.37
TRIO-211ENST00000508343 GLT1D1Q96MS3 346 aa17.37■□□□□ 0.37
TRIO-211ENST00000508343 PDCD2LQ9BRP1 358 aa17.37■□□□□ 0.37
TRIO-211ENST00000508343 STARD7Q9NQZ5 370 aa17.37■□□□□ 0.37
TRIO-211ENST00000508343 ZMYND8Q9ULU4 1186 aaPredicted RBP17.37■□□□□ 0.37
TRIO-211ENST00000508343 ATP11BQ9Y2G3 1177 aa17.37■□□□□ 0.37
TRIO-211ENST00000508343 V9GY48 417 aaPredicted RBP17.37■□□□□ 0.37
TRIO-211ENST00000508343 LRRC37A2A6NM11 1700 aa17.37■□□□□ 0.37
TRIO-211ENST00000508343 PIK3CDO00329 1044 aa17.36■□□□□ 0.37
TRIO-211ENST00000508343 ZEB2O60315 1214 aa17.36■□□□□ 0.37
TRIO-211ENST00000508343 ADD1P35611 737 aaKnown RBP17.36■□□□□ 0.37
TRIO-211ENST00000508343 EVCP57679 992 aa17.36■□□□□ 0.37
TRIO-211ENST00000508343 SEPT14Q6ZU15 432 aa17.36■□□□□ 0.37
TRIO-211ENST00000508343 VSIG10LQ86VR7 867 aa17.36■□□□□ 0.37
TRIO-211ENST00000508343 CUL5Q93034 780 aa17.36■□□□□ 0.37
TRIO-211ENST00000508343 PSTPIP2Q9H939 334 aa17.36■□□□□ 0.37
TRIO-211ENST00000508343 ELP1O95163 1332 aa17.36■□□□□ 0.37
TRIO-211ENST00000508343 CNTNAP5Q8WYK1 1306 aa17.36■□□□□ 0.37
TRIO-211ENST00000508343 MEIS2O14770 477 aa17.35■□□□□ 0.37
TRIO-211ENST00000508343 MYCLP12524 364 aaPredicted RBP17.35■□□□□ 0.37
TRIO-211ENST00000508343 SYN1P17600 705 aa17.35■□□□□ 0.37
TRIO-211ENST00000508343 ANAPC15P60006 121 aa17.35■□□□□ 0.37
TRIO-211ENST00000508343 PGM5Q15124 567 aa17.35■□□□□ 0.37
TRIO-211ENST00000508343 TRIM60Q495X7 471 aa17.35■□□□□ 0.37
TRIO-211ENST00000508343 CCDC62Q6P9F0 684 aa17.35■□□□□ 0.37
TRIO-211ENST00000508343 USP17L6PQ6QN14 398 aa17.35■□□□□ 0.37
TRIO-211ENST00000508343 HEATR3Q7Z4Q2 680 aa17.35■□□□□ 0.37
TRIO-211ENST00000508343 OR6J1Q8NGC5 347 aa17.35■□□□□ 0.37
TRIO-211ENST00000508343 SMARCC2Q8TAQ2 1214 aa17.35■□□□□ 0.37
TRIO-211ENST00000508343 VTI1AQ96AJ9 217 aa17.35■□□□□ 0.37
TRIO-211ENST00000508343 COLQQ9Y215 455 aaPredicted RBP17.35■□□□□ 0.37
TRIO-211ENST00000508343 CABYRO75952 493 aa17.34■□□□□ 0.37
TRIO-211ENST00000508343 ARIH2O95376 493 aa17.34■□□□□ 0.37
TRIO-211ENST00000508343 PDIA3P30101 505 aaKnown RBP17.34■□□□□ 0.37
TRIO-211ENST00000508343 CCND2P30279 289 aa17.34■□□□□ 0.37
TRIO-211ENST00000508343 CPT1AP50416 773 aa17.34■□□□□ 0.37
TRIO-211ENST00000508343 TLE2Q04725 743 aa17.34■□□□□ 0.37
TRIO-211ENST00000508343 TOB2Q14106 344 aaPredicted RBP17.34■□□□□ 0.37
TRIO-211ENST00000508343 CHRDL2Q6WN34 429 aa17.34■□□□□ 0.37
TRIO-211ENST00000508343 UPF3BQ9BZI7 483 aaKnown RBP17.34■□□□□ 0.37
TRIO-211ENST00000508343 NID2Q14112 1375 aa17.33■□□□□ 0.36
TRIO-211ENST00000508343 LY6KQ17RY6 165 aa17.33■□□□□ 0.36
TRIO-211ENST00000508343 BRDTQ58F21 947 aaPredicted RBP17.33■□□□□ 0.36
TRIO-211ENST00000508343 WWC2Q6AWC2 1192 aa17.33■□□□□ 0.36
TRIO-211ENST00000508343 CXCL17Q6UXB2 119 aa17.33■□□□□ 0.36
TRIO-211ENST00000508343 COPS5Q92905 334 aa17.33■□□□□ 0.36
TRIO-211ENST00000508343 GPKOWQ92917 476 aaPredicted RBP eCLIP17.33■□□□□ 0.36
TRIO-211ENST00000508343 TOX2Q96NM4 488 aa17.33■□□□□ 0.36
TRIO-211ENST00000508343 PDRG1Q9NUG6 133 aa17.33■□□□□ 0.36
TRIO-211ENST00000508343 PRKAG2Q9UGJ0 569 aa17.33■□□□□ 0.36
TRIO-211ENST00000508343 DDX41Q9UJV9 622 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms