RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 CFAP58Q5T655 872 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 TCERG1LQ5VWI1 586 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 RBM47A0AV96 593 aaKnown RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 SEC24BO95487 1268 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 SUPT20HL2P0C7V6 817 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 HSPD1P10809 573 aaKnown RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 RPL17P18621 184 aaKnown RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 STAT3P40763 770 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 PRKCZQ05513 592 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 PRPF38AQ8NAV1 312 aaKnown RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 RAB3IL1Q8TBN0 382 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 DBNDD2Q9BQY9 259 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 MTG1Q9BT17 334 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 MROH8Q9H579 483 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 MMRN2Q9H8L6 949 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 CERS4Q9HA82 394 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 GINM1Q9NU53 330 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 TYW1Q9NV66 732 aaKnown RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 INPP5FQ9Y2H2 1132 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 PTPN22Q9Y2R2 807 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 NR2E1Q9Y466 385 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 B4E1Z4 1266 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 NDC80O14777 642 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 ZBTB43O43298 467 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 ENTPD3O75355 529 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 POTEIP0CG38 1075 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 FERP16591 822 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 ADORA2AP29274 412 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 SNX16P57768 344 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 IRF5Q13568 498 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 GSDMBQ8TAX9 411 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 PHKBQ93100 1093 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 ZSCAN10Q96SZ4 725 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 APBA2Q99767 749 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 PTCH2Q9Y6C5 1203 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 LAMB2P55268 1798 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 LTBP3Q9NS15 1303 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 FZD9O00144 591 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 SERPINC1P01008 464 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 FGBP02675 491 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 SLC10A3P09131 477 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 NBPF7P0C2Y1 421 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 GNA11P29992 359 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 NDUFV1P49821 464 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 CACNA2D4Q7Z3S7 1137 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 EXOC6Q8TAG9 804 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 ERCC4Q92889 916 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 CLMNQ96JQ2 1002 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 TEKT3Q9BXF9 490 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 FAM49AQ9H0Q0 323 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 DDX60LQ5H9U9 1706 aaKnown RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 PRKAR2AP13861 404 aaKnown RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 TMED1Q13445 227 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 SEPT2Q15019 361 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 RABEP1Q15276 862 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 SKOR2Q2VWA4 1001 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 CCDC14Q49A88 953 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 ASPRV1Q53RT3 343 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 KCNV1Q6PIU1 500 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 GPR142Q7Z601 462 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 THNSL1Q8IYQ7 743 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 APPBP2Q92624 585 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 TAF4BQ92750 862 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 GOLGA1Q92805 767 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 GLT8D2Q9H1C3 349 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 ASCC2Q9H1I8 757 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-208ENST00000508342 ATP8A2Q9NTI2 1148 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 PAPPA2Q9BXP8 1791 aa3.3□□□□□ -1.88
NEDD4-208ENST00000508342 H7C1W4 665 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 PRDM1O75626 825 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 PSAPP07602 524 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 CTSHP09668 335 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 STAG3L1P0CL83 205 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 IDEP14735 1019 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 MCM2P49736 904 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 SAPCD2Q86UD0 394 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 FAM84BQ96KN1 310 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 ZDHHC15Q96MV8 337 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 NUP88Q99567 741 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 PSTPIP2Q9H939 334 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 SUGCTQ9HAC7 445 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 MAP1BP46821 2468 aaKnown RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 BTBD19C9JJ37 291 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 NFKBIEO00221 500 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 PRPF6O94906 941 aaKnown RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 GOLGA8HP0CJ92 632 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 SMTNP53814 917 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 AMPD3Q01432 767 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 IQCEQ6IPM2 695 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 CCDC89Q8N998 374 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 DDX23Q9BUQ8 820 aaKnown RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 HAUS2Q9NVX0 235 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 DAGLAQ9Y4D2 1042 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 RP1L1Q8IWN7 2480 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 ABCB11O95342 1321 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 TTC41PQ6P2S7 1318 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 WDR46O15213 610 aaKnown RBP3.29□□□□□ -1.88
NEDD4-208ENST00000508342 KLRK1P26718 216 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 CTNNB1P35222 781 aa3.29□□□□□ -1.88
NEDD4-208ENST00000508342 INF2Q27J81 1249 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms